KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:14 2014 Check: 00 .. Name: ENSP00000360730/1-427 Len: 427 Check: 5078 Weight: 1.00 Name: ENSBTAP00000025754/1-380 Len: 427 Check: 691 Weight: 1.00 Name: ENSTTRP00000000247/1-397 Len: 427 Check: 5718 Weight: 1.00 Name: BACU007409/1-275 Len: 427 Check: 1555 Weight: 1.00 Name: bmy_10743T0/1-217 Len: 427 Check: 6948 Weight: 1.00 // 1 50 ENSP00000360730/1-427 MEWPARLCGL WALLLCAGGG GGGGGAAPTE TQPPVTNLSV SVENLCTVIW ENSBTAP00000025754/1-380 MERPARLCGL WVLLLYA--- GRGGVAAPAE SQPPVTNLSV SVENLCTIIW ENSTTRP00000000247/1-397 ---------- ---------- ---------- TQPPVTNLSV SVENLCTVTW BACU007409/1-275 ---------- ---------- --------TE TQPPVTNLSV SVENLCTVTW bmy_10743T0/1-217 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000360730/1-427 TWNPPEGASS NCSLWYFSHF GDKQDKKIAP ETRRSIEVPL NERICLQVGS ENSBTAP00000025754/1-380 TWNPPEGASP NCSLKYFSHF GNKQDKKIAP ETHRSKEVPL NERICLQVGS ENSTTRP00000000247/1-397 TWNPPEGASP NCSLKYFSHF GNKQDKKIAP ETYRSKEVPL NERICLQVGS BACU007409/1-275 TWNPPEGASP NCSLKYFSHF GNKQDK---V KTYRSKEVPL NERICLQVGS bmy_10743T0/1-217 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000360730/1-427 QCSTNESEKP SILVEKCISP PEGDPESAVT ELQCIWHNLS YMKCSWLPGR ENSBTAP00000025754/1-380 QCSTNESEKP SILVEKCISP PEGDPESAVT ELQCIWHNLR YMKCTWLPGR ENSTTRP00000000247/1-397 QCSTNESEKP SILVEKCISP PEGDPESAVT ELQCIWYNLS YMKCSWLPGR BACU007409/1-275 QCSTNESEKP SILVEKCISP PEGDPESAVT ELQCIWYNLS YMKCAWLPGR bmy_10743T0/1-217 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000360730/1-427 NTSPDTNYTL YYWHRSLEKI HQCENIFREG QYFGCSFDLT KVKDSSFEQH ENSBTAP00000025754/1-380 NASPDTNYTL YYWHNSLGKI LQCENIYREG QHIACSFNLT KVKDSSFEQH ENSTTRP00000000247/1-397 NTNPDTNYTL YYWHSSLGKV LQCEDIYREG EHIGCSFALT KVKDSSFEQH BACU007409/1-275 NTNPDTNYTL YYWHSSLGKI LQCEDIYREG QHIGCSFALT KVKDSSFEQH bmy_10743T0/1-217 ---------- ---HSSLGKI LQCEDIYREG QHIGCSFALT KVKDSSFEQH 201 250 ENSP00000360730/1-427 SVQIMVKDNA GKIKPSFNIV PLTSRVKPDP PHIKNLSFHN DDLYVQWENP ENSBTAP00000025754/1-380 SVQVMVKDNA GKIRPSFNIV PLTSHVKPDP PHIKNLSFQN GDLYVQWTNP ENSTTRP00000000247/1-397 SVQVMVKDNA GKIRPSFNIV PLTSHVKPDP PHIKNLSFQN GDLYVQWKNP BACU007409/1-275 SVQVMVKDNA GKIRPSFNIV PLTSHVKPDP PRIKNLSFQN GDLYVQWKNP bmy_10743T0/1-217 SVQVMVKDNA GKIRPSFNIV PLTSHVKPDP PHIKNLSFQN GDLYVQWKNP 251 300 ENSP00000360730/1-427 QNFISRCLFY EVEVNNSQTE THNVFYVQEA KCENPEFERN VENTSCFMVP ENSBTAP00000025754/1-380 QNFQSKCLSY EVEVNNSHAE THDIFYVEEA KCQNTEFEGN LEGTICFMVP ENSTTRP00000000247/1-397 QNFYSRCLSY EVEVNNSQAE THDIFYVEEA KCQNSEFEGN LEGTICFIVP BACU007409/1-275 QNFYSRCLSY EVEVNNSQAE THDTFYH--- ---------- ---------- bmy_10743T0/1-217 QNFYSRCLSY EVEVNNSQAE THDIFY---- ---------- --GTICFMVP 301 350 ENSP00000360730/1-427 GVLPDTLNTV RIRVKTNKLC YEDDKLWSNW SQEMSIGKKR NSTLYITMLL ENSBTAP00000025754/1-380 GVLPDTLNTV RIRVKTNKLC YEDDKLWSNW SQAMSIGQKA NQTFYITTLL ENSTTRP00000000247/1-397 GVLPDTLNTV RIRVKTNKLC YEDDKLWSNW SQAMSIGQKA NPTFYITTLL BACU007409/1-275 ---------- ---------- ------WKKY DICEKQTKEE TDS------- bmy_10743T0/1-217 GVLPDTLNTV RIRVKTNKLC YEDDKLWSNW SQAMSIGQKA NPTFYITTLL 351 400 ENSP00000360730/1-427 IVPVIVAGAI IVLLLYLKRL KIIIFPPIPD PGKIFKEMFG DQNDDTLHWK ENSBTAP00000025754/1-380 IIPVIVAAAV IVLLLYLKSL ATILCGKIPK VGI------- ---------- ENSTTRP00000000247/1-397 IIPIIVAAAI IVLLLYLKRL KIIIFPPIPD PGKIFKEMFG DQNDDTLHWK BACU007409/1-275 ---------- VVLIESLKRA SQ-------- ---------- ---------- bmy_10743T0/1-217 IIPIFVAAAI IVLLLYLKRL KIIIFPPIPD PGKIFKEMFG DQNDDT---- 401 450 ENSP00000360730/1-427 KYDIYEKQTK EETDSVVLIE NLKKASQ ENSBTAP00000025754/1-380 ---------- ---------- ------- ENSTTRP00000000247/1-397 KYDIYEKQTK EETDSVVLIE SLKRASQ BACU007409/1-275 ---------- ---------- ------- bmy_10743T0/1-217 ---------- ---------- -------