KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:16 2014 Check: 00 .. Name: ENSTTRP00000006585/1-1234 Len: 1237 Check: 5632 Weight: 1.00 Name: BACU011807/1-1053 Len: 1237 Check: 5309 Weight: 1.00 Name: ENSP00000442186/1-1237 Len: 1237 Check: 6234 Weight: 1.00 Name: bmy_13005T0/1-1032 Len: 1237 Check: 9549 Weight: 1.00 Name: ENSBTAP00000025758/1-1032 Len: 1237 Check: 9430 Weight: 1.00 // 1 50 ENSTTRP00000006585/1-1234 MDLRDFYLLA ALIACLRLDS AIAQELIYTI REELPENVPI GNIPKDLNIS BACU011807/1-1053 MDLRDFYLLA ALIACLRLDS AIAQELIYTI REELPENVPI GNIPKDLNIS ENSP00000442186/1-1237 MDLRDFYLLA ALIACLRLDS AIAQELIYTI REELPENVPI GNIPKDLNIS bmy_13005T0/1-1032 MDLRDFYLLA ALIACLRLDS AIAQELIYTI REELPENVPI GNIPKDLNIS ENSBTAP00000025758/1-1032 MDLRDFYLLA ALIACLRLDS AIAQELIYTI REELPENVPI GNIPKDLNIS 51 100 ENSTTRP00000006585/1-1234 HINAATGTSA SLVYRLVSKA GDAPLVKVSS STGEIFTTSN RIDREKLCAG BACU011807/1-1053 HINAATGTSA SLVYRLVSKA GDAPLVKVSS STGEIFTTSN RIDREKLCAG ENSP00000442186/1-1237 HINAATGTSA SLVYRLVSKA GDAPLVKVSS STGEIFTTSN RIDREKLCAG bmy_13005T0/1-1032 HINAATGTSA SLVYRLVSKA GDAPLVKVSS STGEIFTTSN RIDREKLCAG ENSBTAP00000025758/1-1032 HINAATGTSA SLVYRLVSKA GDAPLVKVSS STGEIFTTSN RIDREKLCAG 101 150 ENSTTRP00000006585/1-1234 ASYDEENECF FELEVVILPN DFFRLIKIKI IVKDTNDNAP MFPSPVINIS BACU011807/1-1053 ASYDEENECF FELEVVILPN DFFRLIKIKI IVKDTNDNAP MFPSPVINIS ENSP00000442186/1-1237 ASYAEENECF FELEVVILPN DFFRLIKIKI IVKDTNDNAP MFPSPVINIS bmy_13005T0/1-1032 ASYDEENECF FELEVVILPN DFFRLIKIKI IVKDTNDNAP MFPSPVINIS ENSBTAP00000025758/1-1032 ASYAEENECF FELEVVILPN DFFRLIKIKI IVKDTNDNAP MFPSPVINIS 151 200 ENSTTRP00000006585/1-1234 IPENTLINSR FPIPSATDPD TGFNGVQHYE LLNGQSVFGL DIVETPEGEK BACU011807/1-1053 IPENTLINSR FPIPSATDPD TGFNGVQHYE LLNGQSVFGL DIVETPEGEK ENSP00000442186/1-1237 IPENTLINSR FPIPSATDPD TGFNGVQHYE LLNGQSVFGL DIVETPEGEK bmy_13005T0/1-1032 IPENTLINSR FPIPSATDPD TGFNGVQHYE LLNGQSVFGL DIVETPEGEK ENSBTAP00000025758/1-1032 IPENTLINSR FPIPSATDPD TGFNGVQHYE LLNGQSVFGL DIVETPEGEK 201 250 ENSTTRP00000006585/1-1234 WPQLIVQQNL DREQKDTYVM KIKVEDGGTP QKSSTAILQI TVSDVNDNRP BACU011807/1-1053 WPQLIVQQNL DREQKDTYVM KIKVEDGGTP QKSSTAILQV TVSDVNDNRP ENSP00000442186/1-1237 WPQLIVQQNL DREQKDTYVM KIKVEDGGTP QKSSTAILQV TVSDVNDNRP bmy_13005T0/1-1032 WPQLIVQQNL DREQKDTYVM KIKVEDGGTP QKSSTAILQV TVSDVNDNRP ENSBTAP00000025758/1-1032 WPQLIVQQNL DREQKDTYVM KIKVEDGGTP QKSSTAILQV TVSDVNDNKP 251 300 ENSTTRP00000006585/1-1234 VFKEGQVEVH IPENAPVGTS VIQLHATDAD IGSNAEIRYI FGAQVAPATK BACU011807/1-1053 VFKEGQVEVH IPENAPVGTS VIQLHATDAD IGSNAEIRYV FGAQVAPATK ENSP00000442186/1-1237 VFKEGQVEVH IPENAPVGTS VIQLHATDAD IGSNAEIRYI FGAQVAPATK bmy_13005T0/1-1032 VFKEGQVEVH IPENAPVGTS VIQLHATDAD IGSNAEIRYI FGAQVAPATK ENSBTAP00000025758/1-1032 VFKEGQVEVH IPENAPVGTS VIQLHATDAD IGSNAEIRYI FGAQVAPATK 301 350 ENSTTRP00000006585/1-1234 RLFALNNTTG LITVQRSLDR EETAIHKVTV LASDGSSTPA RATVTINVTD BACU011807/1-1053 RLFALNNTTG LITVQRSLDR EETAIHKVTV LASDGSSTPA RATVTINVTD ENSP00000442186/1-1237 RLFALNNTTG LITVQRSLDR EETAIHKVTV LASDGSSTPA RATVTINVTD bmy_13005T0/1-1032 RLFALNNTTG LITVQRSLDR EETAIHKVTV LASDGSSTPA RATVTINVTD ENSBTAP00000025758/1-1032 RLFALNNTTG LITVQRSLDR EETAIHKVTV LASDGSSTPA RATVTINVTD 351 400 ENSTTRP00000006585/1-1234 VNDNPPNIDL RYIISPINGT VYLSEKDPVN TKIALITVSD KDTDVNGKVI BACU011807/1-1053 VNDNPPNIDL RYIISPINGT VYLSEKDPVN TKIALITVSD KDTDVNGKVI ENSP00000442186/1-1237 VNDNPPNIDL RYIISPINGT VYLSEKDPVN TKIALITVSD KDTDVNGKVI bmy_13005T0/1-1032 VNDNPPNIDL RYIISPINGT VYLSEKDPVN TKIALITVSD KDTDVNGKVI ENSBTAP00000025758/1-1032 VNDNPPNIDL RYIISPINGT VYLSEKDPVN TKIALITVSD KDTDVNGKVI 401 450 ENSTTRP00000006585/1-1234 CFIEREVPFH LKAVYDNQYL LETSSLLDYE GTKEFSFKIV ASDSGKPSLN BACU011807/1-1053 CFIEREVPFH LKAVYDNQYL LETSSLLDYE GTKEFSFKIV ASDSGKPSLN ENSP00000442186/1-1237 CFIEREVPFH LKAVYDNQYL LETSSLLDYE GTKEFSFKIV ASDSGKPSLN bmy_13005T0/1-1032 CFIEREVPFH LKAVYDNQYL LETSSLLDYE GTKEFSFKIV ASDSGKPSLN ENSBTAP00000025758/1-1032 CFIEREVPFH LKAVYDNQYL LETSSLLDYE GTKEFSFKIV ASDSGKPSLN 451 500 ENSTTRP00000006585/1-1234 QTALVRVKLE DENDNPPIFN QPVIELSVSE NNRRGLYLTT ISATDEDSGK BACU011807/1-1053 QTALVRVKLE DENDNPPIFN QPVIELSVAE NNRRGLYLTT ISATDEDSGK ENSP00000442186/1-1237 QTALVRVKLE DENDNPPIFN QPVIELSVSE NNRRGLYLTT ISATDEDSGK bmy_13005T0/1-1032 QTALVRVKLE DENDNPPIFN QPVIELSVSE NNRRGLYLTT ISATDEDSGK ENSBTAP00000025758/1-1032 QTALVRVKLE DENDNPPIFN QPVIELSVSE NNRRGLYLTT ISATDEDSGK 501 550 ENSTTRP00000006585/1-1234 NADIVYQLGP NASFFDLDRK TGVLTASRVF DREEQERFIF TVTARDNGTP BACU011807/1-1053 NADIVYQLGP NASFFDLDRK TGVLTASRVF DREEQERFIF TVTARDNGTP ENSP00000442186/1-1237 NADIVYQLGP NASFFDLDRK TGVLTASRVF DREEQERFIF TVTARDNGTP bmy_13005T0/1-1032 NADIVYQLGP NASFFDLDRK TGVLTASRVF DREEQERFIF TVTARDNGTP ENSBTAP00000025758/1-1032 NADIVYQLGP NASFFDLDRK TGVLTASRVF DREEQERFIF TVTARDNGTP 551 600 ENSTTRP00000006585/1-1234 PLQSQAAVIV TVLDENDNSP KFTHNHFQFF VSENLPKYST VGVITVTDAD BACU011807/1-1053 PLQSQAAVIV TVLDENDNSP KFTHNHFQFF VSENLPKYST VGVITVTDAD ENSP00000442186/1-1237 PLQSQAAVIV TVLDENDNSP KFTHNHFQFF VSENLPKYST VGVITVTDAD bmy_13005T0/1-1032 PLQSQAAVIV TVLDENDNSP KFTHNHFQFF VSENLPKYST VGVITVTDAD ENSBTAP00000025758/1-1032 PLQSQAAVIV TVLDENDNSP KFTHNHFQFF VSENLPKYST VGVITVTDAD 601 650 ENSTTRP00000006585/1-1234 AGENKAVTLS ILNDNDNFVL DPYSGVIKSN VSFDREQQSS YTFDVKATDG BACU011807/1-1053 AGENKAVTLS ILNDNDNFVL DPYSGVIKSN VSFDREQQSS YTFDVKATDG ENSP00000442186/1-1237 AGENKAVTLS ILNDNDNFVL DPYSGVIKSN VSFDREQQSS YTFDVKATDG bmy_13005T0/1-1032 AGENKAVTLS ILNDNDNFVL DPYSGVIKSN VSFDREQQSS YTFDVKATDG ENSBTAP00000025758/1-1032 AGENKAVTLS ILNDNDNFVL DPYSGVIKSN VSFDREQQSS YTFDVKATDG 651 700 ENSTTRP00000006585/1-1234 GQPPRSSTAK VTINVMDVND NSPVVISPPS NTSFKLVPLS AIPGSVIAEV BACU011807/1-1053 GQPPRSSTAK VTINVMDVND NSPVVISPPS NTSFKLVPLS AIPGSVIAEV ENSP00000442186/1-1237 GQPPRSSTAK VTINVMDVND NSPVVISPPS NTSFKLVPLS AIPGSVVAEV bmy_13005T0/1-1032 GQPPRSSTAK VTINVMDVND NSPVVISPPS NTSFKLVPLS AIPGSVIAEV ENSBTAP00000025758/1-1032 GQPPRSSTAK VTINVMDVND NSPVVISPPS NTSFKLVPLS AIPGSVVAEV 701 750 ENSTTRP00000006585/1-1234 FAVDIDTGMN AELKYTIVSG NNKGLFRIDP VTGNITLEEK PAPTDVGLHR BACU011807/1-1053 FAVDIDTGMN AELKYTIVSG NNKGLFRIDP VTGNITLEEK PAPTDVGLHR ENSP00000442186/1-1237 FAVDVDTGMN AELKYTIVSG NNKGLFRIDP VTGNITLEEK PAPTDVGLHR bmy_13005T0/1-1032 FAVDIDTGMN AELKYTIVSG NNKGLFRIDP VTGNITLEEK PAPTDVGLHR ENSBTAP00000025758/1-1032 FAVDIDTGMN AELKYTIVSG NNKGLFRIDP VTGNITLEEK PAPTDVGLHR 751 800 ENSTTRP00000006585/1-1234 LVVNISDLGY PKSLHTLVLV FLYVNDTAGN ASYIYDLIRR TMETPLDRNI BACU011807/1-1053 LVVNISDLGY PKSLHTLVLV FLYVNDTAGN ASYIYDLIRR TMETPLDRNI ENSP00000442186/1-1237 LVVNISDLGY PKSLHTLVLV FLYVNDTAGN ASYIYDLIRR TMETPLDRNI bmy_13005T0/1-1032 LVVNISDLGY PKSLHTLVLV FLYVNDTAGN ASYIYDLIRR TMETPLDRNI ENSBTAP00000025758/1-1032 LVVNISDLGY PKSLHTLVLV FLYVNDTAGN ASYIYDLIRR TMETPLDRNI 801 850 ENSTTRP00000006585/1-1234 GDSSQPYQNE DYLTIMIAIV S-AMVVIVVI -VNVLVRCRH ASKF-AAQRN BACU011807/1-1053 GDSSQPYQNE DYLTIMIAIV AGAMVVIVVI FVTVLVRCRH ASRFKAAQRS ENSP00000442186/1-1237 GDSSQPYQNE DYLTIMIAII AGAMVVIVVI FVTVLVRCRH ASRFKAAQRS bmy_13005T0/1-1032 GDSSQPYQNE DYLTIMIAIV AGAMVVIVVI FVTVLVRCRH ASRFKAAQRS ENSBTAP00000025758/1-1032 GDSSQPYQNE DYLTIMIAIV AGAMVVIVVI FVTVLVRCRH ASRFKAAQRS 851 900 ENSTTRP00000006585/1-1234 KQGXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU011807/1-1053 KQGAEWMSPN QENKQNKKKK RKKRKSPKSS LLNFVTIEES KPDDAVHEPI ENSP00000442186/1-1237 KQGAEWMSPN QENKQNKKKK RKKRKSPKSS LLNFVTIEES KPDDAVHEPI bmy_13005T0/1-1032 KQGAEWMSPN QENKQNKKKK RKKRKSPKSS LLNFVTIEES KPDDAVHEPI ENSBTAP00000025758/1-1032 KQGAEWMSPN QENKQNKKKK RKKRKSPKSS LLNFVTIEES KPDDAVHEPI 901 950 ENSTTRP00000006585/1-1234 XXXXXLPAEL EEQSIGRFDW GPAPPTTFKP NSPDLAKHYK SASPQPAFHL BACU011807/1-1053 NGTISLPAEL EEQSIGRFDW GPAPPTTFKP NSPDLAKHYK SASPQPAFHL ENSP00000442186/1-1237 NGTISLPAEL EEQSIGRFDW GPAPPTTFKP NSPDLAKHYK SASPQPAFHL bmy_13005T0/1-1032 NGTISLPAEL EEQSIGRFDW GPAPPTTFKP NSPDLAKHYK SASPQPAFHL ENSBTAP00000025758/1-1032 NGTISLPAEL EEQSIGRFDW GPAPPTTFKP NSPDLAKHYK SASPQPAFHL 951 1000 ENSTTRP00000006585/1-1234 KPDTPVSVKK HHVIQELPLD NTFVGGCDTL SKRSSTSSDH FSASECSSQG BACU011807/1-1053 KPDTPVSVKK HHVIQELPLD NTFVGGCDTL SKRSXXXXXX XXXXXXXXXX ENSP00000442186/1-1237 KPDTPVSVKK HHVIQELPLD NTFVGGCDTL SKRSSTSSDH FSASECSSQG bmy_13005T0/1-1032 KPDTPVSVKK HHVIQELPLD NTFVGGCDTL SKRSSTSSDH FSASECSSQG ENSBTAP00000025758/1-1032 KPDTPVSVKK HHVIQELPLD NTFVGGCDTL SKRSSTSSDH FSASECSSQG 1001 1050 ENSTTRP00000006585/1-1234 GFKTKGPLHT RQCNSHSKSD NIPVTPQKCP SSVGFHIQEN EESHYESQRR BACU011807/1-1053 XXXXXXXXXX XXXXXX---- ---------- ---------- ---------- ENSP00000442186/1-1237 GFKTKGPLHT RQCNSHSKSD NIPVTPQKCP SSTGFHIQEN EESHYESQRR bmy_13005T0/1-1032 GFKTKGPLHT RQVNEH---- ---------- ---------- ---------- ENSBTAP00000025758/1-1032 GFKTKGPLHT RQVNEH---- ---------- ---------- ---------- 1051 1100 ENSTTRP00000006585/1-1234 VTFHLPDGSQ ESCSDSGLGD HEPVGSGTLI SHPLPLVQPQ DEFYDQASPD BACU011807/1-1053 ---------- ---------- ---------- ---------- ---------- ENSP00000442186/1-1237 VTFHLPDGSQ ESCSDSGLGD HEPVGSGTLI SHPLPLVQPQ DEFYDQASPD bmy_13005T0/1-1032 ---------- ---------- ---------- ---------- --FY------ ENSBTAP00000025758/1-1032 ---------- ---------- ---------- ---------- --FY------ 1101 1150 ENSTTRP00000006585/1-1234 KRTEADGNSD PNSDGPLGPR GLAEATEMCT QECLVLGHSD NCWMPPGLGP BACU011807/1-1053 ---------- ---------- ---------- ---------- ---------- ENSP00000442186/1-1237 KRTEADGNSD PNSDGPLGPR GLAEATEMCT QECLVLGHSD NCWMPPGLGP bmy_13005T0/1-1032 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025758/1-1032 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSTTRP00000006585/1-1234 YQHPKSPLST FAPQKEWVKK DKLVNGHTLT RAWKEDSNRN QFNDRKQYGS BACU011807/1-1053 ------XXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX LFH------- ENSP00000442186/1-1237 YQHPKSPLST FAPQKEWVKK DKLVNGHTLT RAWKEDSNRN QFNDRKQYGS bmy_13005T0/1-1032 ---------- ------W--- -------SIS TAYKCPVN-- ------QY-- ENSBTAP00000025758/1-1032 ---------- ------W--- -------SIS TAYKCPVN-- ------QY-- 1201 1250 ENSTTRP00000006585/1-1234 TEGHFNNGSH MTDIPLANLK SYKQAGGAIE SPKEHQL BACU011807/1-1053 ---------- ---------- ---------- ------- ENSP00000442186/1-1237 NEGHFNNGSH MTDIPLANLK SYKQAGGATE SPKEHQL bmy_13005T0/1-1032 ---------- ---------- ---------- ------- ENSBTAP00000025758/1-1032 ---------- ---------- ---------- -------