KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:18 2014 Check: 00 .. Name: ENSTTRP00000015487/1-665 Len: 665 Check: 6401 Weight: 1.00 Name: ENSBTAP00000025774/1-628 Len: 665 Check: 9375 Weight: 1.00 Name: ENSP00000385822/1-630 Len: 665 Check: 2546 Weight: 1.00 Name: bmy_00144T0/1-630 Len: 665 Check: 9511 Weight: 1.00 Name: BACU010479/1-483 Len: 665 Check: 1111 Weight: 1.00 // 1 50 ENSTTRP00000015487/1-665 MSLNPIDIKC GDSQIAPRIQ VSSAHGRQHR LLGSRMETTP LNSQKELTAY ENSBTAP00000025774/1-628 ---------- ---------- ---------- -----METTP LNSQKELSAY ENSP00000385822/1-630 ---------- ---------- ---------- -----METTP LNSQKQLSAC bmy_00144T0/1-630 ---------- ---------- ---------- -----METTP LNSQKELSAY BACU010479/1-483 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015487/1-665 VDGEDCQGNS VLQRGVPVPG DKAESSQISN GYSAVPSPSA GEDPQHSIPA ENSBTAP00000025774/1-628 KDGEDCQENG VLQKGVPAPG DKAESGQISN GYSAVPNPGA GDDTQHSIPA ENSP00000385822/1-630 EDGEDCQENG VLQKVVPTPG DKVESGQISN GYSAVPSPGA GDDTRHSIPA bmy_00144T0/1-630 KDGEDCQGNG VLQKGVPAPG DKAETGQISN GYSAVPSPGA GDDTQHSIPA BACU010479/1-483 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000015487/1-665 ATTTLVAEVH PGQRETWGKK VDFLLSVIGY AVDLGNVWRF PYICYQNGGG ENSBTAP00000025774/1-628 ATTALVAEVH PAERETWAKK VDFLLSVIGY AVDLGNVWRF PYICYQNGGG ENSP00000385822/1-630 TTTTLVAELH QGERETWGKK VDFLLSVIGY AVDLGNVWRF PYICYQNGGG bmy_00144T0/1-630 ATTALVAEVH PGERETWGKK VDFLLSVIGY AVDLGNVWRF PYICYQNGGG BACU010479/1-483 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000015487/1-665 AFLLPYTIMA VFGGIPLFYM ELALGQYHRN GCISIWRKIC PIFKGIGYAI ENSBTAP00000025774/1-628 AFLLPYTIMA IFGGIPLFYM ELALGQYHRN GCISIWTKIC PIFKGIGCAI ENSP00000385822/1-630 AFLLPYTIMA IFGGIPLFYM ELALGQYHRN GCISIWRKIC PIFKGIGYAI bmy_00144T0/1-630 AFLLPYTIMA VFGGIPLFYM ELALGQYHRN GCISIWRKIC PIFKGIGYAI BACU010479/1-483 ---------- ---------M ELALGQYHRN GCISIWRKIC PIFKGIGYAI 201 250 ENSTTRP00000015487/1-665 CIIAFYIASY YNTIMAWALY YLISSFAAQL PWTSCKNSWN TGNCTNYFSE ENSBTAP00000025774/1-628 CLIAFYIASY YNTIIAWALY YLISSFTEQL PWTSCENSWN TGNCTNYFSE ENSP00000385822/1-630 CIIAFYIASY YNTIMAWALY YLISSFTDQL PWTSCKNSWN TGNCTNYFSE bmy_00144T0/1-630 CIIAFYIASY YNTIMAWALY YLISSFAAQL PWTSCKNSWN TGNCTNYFSE BACU010479/1-483 CIIAFYIASY YNTIMAWALY YLISSFAAQL PWTSCKNSWN TGNCTNYFSE 251 300 ENSTTRP00000015487/1-665 DNVTWTLHST SPAEEFYTRH VLQIHRSKGL QDLGGISWQL ALCIMLIFTV ENSBTAP00000025774/1-628 DNITWTLHST SPAEEFYTRH VLCILRMSNC RHW-GLSWQL VLCIM-IFTV ENSP00000385822/1-630 DNITWTLHST SPAEEFYTRH VLQIHRSKGL QDLGGISWQL ALCIMLIFTV bmy_00144T0/1-630 DNITWTLHST SPAEEFYTRH VLQIHRSKGL QDLGGISWQL ALCIMLIFTI BACU010479/1-483 DNITWTLHST SPAEEFYTRH VLQIHRSKGL HDLGGISWQL ALCIMLIFTI 301 350 ENSTTRP00000015487/1-665 IYFSIWKGVK TSGKVVWVTA TFPYIILSIL LVRGATLPGA WRGVLFYLKP ENSBTAP00000025774/1-628 IYFSIWKGVK TSGKVVWVTA TFPYIILLIL LVRGATLPGA WRGVLFYLKP ENSP00000385822/1-630 IYFSIWKGVK TSGKVVWVTA TFPYIILSVL LVRGATLPGA WRGVLFYLKP bmy_00144T0/1-630 IYFSIWKGVK TSGKVVWVTA TFPYIILSIL LVRGATLPGA WRGVLFYLKP BACU010479/1-483 IYFSIWKGVK TSGKVVWVTA TFPYIILSIL LVRGATLPGA WRGVLFYLKP 351 400 ENSTTRP00000015487/1-665 NWQKLLETGV WVDAAAQIFF SLGPGFGVLL AFASYNKFNN NCYQDALVTS ENSBTAP00000025774/1-628 NWQKLLETGV WVDAAAQIFF SLGPGFGVLL AFASYNKFHN NCYQDALVTS ENSP00000385822/1-630 NWQKLLETGV WIDAAAQIFF SLGPGFGVLL AFASYNKFNN NCYQDALVTS bmy_00144T0/1-630 NWQKLLETGV WVDAAAQIFF SLGPGFGVLL AFASYNKFNN NCYQDALVTS BACU010479/1-483 NWQKLLETGV WVDAAAQIFF SLGPGFGVLL AFASYNKFNN NCYQDALVTS 401 450 ENSTTRP00000015487/1-665 VVNCMTSFVS GFVIFTVLGY MAEMRNEDVS EVAKDAGPSL LFITYAEAIA ENSBTAP00000025774/1-628 AVNCMTSFVS GFVIFTVLGY MAEMRKEDVS EVAKDAGPSL LFITYAEAIA ENSP00000385822/1-630 VVNCMTSFVS GFVIFTVLGY MAEMRNEDVS EVAKDAGPSL LFITYAEAIA bmy_00144T0/1-630 VVNCVTSFVS GFVIFTVLGY MAEMRNEDVS EVAKDAGPSL LFITYAEAIA BACU010479/1-483 VVNCVTSFVS GFVIFTVLGY MAEMRNEDVS EVAKDAGPSL LFITYAEAIA 451 500 ENSTTRP00000015487/1-665 NMPASTFFAI IFFLMLITLG LDSTFAGLEG VITAVLDEFP HIWSKRREWF ENSBTAP00000025774/1-628 NMPASTFFAI VFFLMLITLG LDSTFAGLEG VITAVLDEFP HVWAKRREWF ENSP00000385822/1-630 NMPASTFFAI IFFLMLITLG LDSTFAGLEG VITAVLDEFP HVWAKRRERF bmy_00144T0/1-630 NMPASTFFSI IFFLMLITLG LDSTFAGLEG VITAVLDEFP HIWSKRREWF BACU010479/1-483 NMPASTFFAI IFFLMLITLG LDSTFAGLEG VITAVLDEFP HIWSKRREWF 501 550 ENSTTRP00000015487/1-665 VLSVVITCFF GSLITLTFXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000025774/1-628 VLGVVITCFF GSLVTLTFGG AYVVKLLEEF ATGPAVLTVA LIEAVAVFWF ENSP00000385822/1-630 VLAVVITCFF GSLVTLTFGG AYVVKLLEEY ATGPAVLTVA LIEAVAVSWF bmy_00144T0/1-630 VLSVVITCFF GSLITLTFGG AYVVKLLEEF ATGPAVLTVA LIEAIAVCWF BACU010479/1-483 VLSVVITCFF GSLITLTFGG AYVVKLLEEF ATGPAVLTVA LIEAIAVCWF 551 600 ENSTTRP00000015487/1-665 XXINQFCSDV KEMLGFSPGW FWRICWVAIS PLFLLFIICS FLMSPPQLRL ENSBTAP00000025774/1-628 YGINQFCSDV KEMLGFSPGW FWKICWVAIS PLFLLFIICS FLMSPPQLRL ENSP00000385822/1-630 YGITQFCRDV KEMLGFSPGW FWRICWVAIS PLFLLFIICS FLMSPPQLRL bmy_00144T0/1-630 YGINQFCSDV KEMLGFSPGW FWRICWVAIS PLFLLFIICS FLMSPPQLRL BACU010479/1-483 YGINQFCSDV KEMLGFSPGW FWRICWVAIS PLFLLFIICS FLMSPPQLRL 601 650 ENSTTRP00000015487/1-665 FQYNYPQWSI ILGYCIGTSS FICIPMYITY RLIITPGTLK ERLIKGITPE ENSBTAP00000025774/1-628 FQYDYPRWSI ILGYCIGTSS FICIPTYITY RLIVTPGTLK ERIIKGITPE ENSP00000385822/1-630 FQYNYPYWSI ILGYCIGTSS FICIPTYIAY RLIITPGTFK ERIIKSITPE bmy_00144T0/1-630 FQYNYPQWSI ILGYCIGTSS FICIPMYITY RLIVTPGTLK ERLIKGITPE BACU010479/1-483 FQYNYPQWSI ILGYCIGTSS FICIPMYITY RLIITPGTLK E-VCASVCV- 651 700 ENSTTRP00000015487/1-665 TPTEIPCGDI HLNAV ENSBTAP00000025774/1-628 TPTAIPCGDI RLNAV ENSP00000385822/1-630 TPTEIPCGDI RLNAV bmy_00144T0/1-630 TPTEIPCGDI HLNAV BACU010479/1-483 ------CSDW -----