KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:21 2014 Check: 00 .. Name: ENSP00000442830/1-360 Len: 361 Check: 9531 Weight: 1.00 Name: ENSBTAP00000025809/1-361 Len: 361 Check: 970 Weight: 1.00 Name: ENSTTRP00000015298/1-360 Len: 361 Check: 3130 Weight: 1.00 Name: bmy_04555T0/1-360 Len: 361 Check: 3840 Weight: 1.00 Name: BACU005776/1-246 Len: 361 Check: 3920 Weight: 1.00 // 1 50 ENSP00000442830/1-360 MEECWVTEIA NGSKDGLDSN PMKDYMILSG PQKTAVAVLC TLLGLLSALE ENSBTAP00000025809/1-361 MEICLKIEAA NGSSDGLNFN PMKEYMILSG PQKIAIAVLC TLLGLLSALE ENSTTRP00000015298/1-360 MEICGKIQAG NGSTDGLDFN PMKDYMILSS SQKIAIAVLC TSLGILSALE bmy_04555T0/1-360 MEICWKIQAA NGSIDGLDFN PMKDYMILSS SQKIAIAVLC TPLGLLSALE BACU005776/1-246 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000442830/1-360 NVAVLYLILS SHQLRRKPSY LFIGSLAGAD FLASVVFACS FVNFHVFHGV ENSBTAP00000025809/1-361 NLVVLYLIGS SHRLRKKPSY LFIGSLAGAD FLASVVFASS FVHFHVFDGV ENSTTRP00000015298/1-360 NLVVLYLILS SHRLRRKPSY LFIGSLAGAD FLASAVFAFN FVNFHVFHGF bmy_04555T0/1-360 NLVVLYLILS SHRLRRKPSY LFIGSLAGAD FLASVVFAFN FVYFHVFHGV BACU005776/1-246 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000442830/1-360 DSKAVFLLKI GSVTMTFTAS VGSLLLTAID RYLCLRYPPS YKALLTRGRA ENSBTAP00000025809/1-361 DSKAVFLLKI GSVTLTFTAS LGSLLLTAID RYLCLRYPPT YKALLTRRRA ENSTTRP00000015298/1-360 DSKAVFLLKI GSVTMTFTAS VGSLLLTAID RYLCLHYPPT YKALLTRGRA bmy_04555T0/1-360 DSKAVFLLKI GSVTMTFTAS VGSLLLTAID RYLCLRYPPT YKALLTRGRA BACU005776/1-246 ---------- ----MTFTAS VGSLLLTAVD RYLCLRYPPT YKALLTRGRA 151 200 ENSP00000442830/1-360 LVTLGIMWVL SALVSYLPLM GWTCCPRPCS ELFPLIPNDY LLSWLLFIAF ENSBTAP00000025809/1-361 LVTLGIMWVL AALVSYLPLM GWTCCPRPCS ELFPLIPNDY LLGWLLFIAA ENSTTRP00000015298/1-360 LVTLGIMWVL SALVSSLPLM GWTCCPRPCS ELFPLIPNDY LLGWLLFIAV bmy_04555T0/1-360 LVTLGIMWVL SALVSSLPLM GWTCCPRPCS ELFPLIPNDY LLGWLLFIAV BACU005776/1-246 LVTLGIMWVL SALVSSLPLM GWTCCPKPCS ELFPLIPNDY LLGWLLFIAV 201 250 ENSP00000442830/1-360 LFSGIIYTYG HVLWKAHQHV ASLSGHQDRQ VPGMARMRLD VRLAKTLGLV ENSBTAP00000025809/1-361 LFAGIIYTYA HVLWKAHQHV ASLAEHRDRH LSGIARMRLD VRLAKTLGML ENSTTRP00000015298/1-360 LFSGIIYTYA HVLWKARQHV TSLAEHRDRQ VLGMARMRLD VWLAKTLGVL bmy_04555T0/1-360 LFSGITYTYA HVLWKARQHV ASLAEHRDRQ VLGMARMRLD VRLAKTLGVL BACU005776/1-246 LFSGIIYTYA HVLWKAHQHV ASLAEHRDRQ VLGMARMRLD VRLAKTLGVL 251 300 ENSP00000442830/1-360 LAVLLICWFP VLALMAHSLA TTLSDQVKKA FAFCSMLCLI NSMVNPVIYA ENSBTAP00000025809/1-361 LAVLFIFWFP VLALMVYSLG ARLSDQVKKV FAFCSLLCLV NSMVNPIIYA ENSTTRP00000015298/1-360 LAVLLICWVP VLTLMVYSLA TTLSKQVKEV FAFCSLLCLV NSMVNPIIYA bmy_04555T0/1-360 LAVLFICWLP VLTLMVYSLA TTLSKQVKEV FAFCSLLCLV NSMVNPIIYA BACU005776/1-246 LAVLFTCWVP VLTLMVYSLA ITPSKQVKKV FAFCSLLCLV NSMVNPIIYA 301 350 ENSP00000442830/1-360 LRSGEIRSSA HHCLAHWKKC VRGLGSEAKE EAPRSSVTET EADGKITPWP ENSBTAP00000025809/1-361 LRSGEIRSSA HHRLARWKKC VRGLGPEGKG EIPRSSVTET EADVKTTPGL ENSTTRP00000015298/1-360 LRSGEIRSSA RHRLAHWRKC LRGLGPEGKE EFPRSSVTET EADVKITPGP bmy_04555T0/1-360 LQSGEIRSSA HHRLAHWKKC LRGLGPEGKE EVPRSSVTET EADVKITLGP BACU005776/1-246 LRSGEIRSSA HHRLAHWKKC LRGLGPEGKE EVPRSSVTET EADVKITLGP 351 400 ENSP00000442830/1-360 DSRDLDLSDC - ENSBTAP00000025809/1-361 DSRELSWPDE L ENSTTRP00000015298/1-360 DSRELYCSNH - bmy_04555T0/1-360 DSRELYCSDH - BACU005776/1-246 DSRELYCSDH -