KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:27:21 2014 Check: 00 ..
Name: ENSP00000442830/1-360 Len: 361 Check: 9531 Weight: 1.00
Name: ENSBTAP00000025809/1-361 Len: 361 Check: 970 Weight: 1.00
Name: ENSTTRP00000015298/1-360 Len: 361 Check: 3130 Weight: 1.00
Name: bmy_04555T0/1-360 Len: 361 Check: 3840 Weight: 1.00
Name: BACU005776/1-246 Len: 361 Check: 3920 Weight: 1.00
//
1 50
ENSP00000442830/1-360 MEECWVTEIA NGSKDGLDSN PMKDYMILSG PQKTAVAVLC TLLGLLSALE
ENSBTAP00000025809/1-361 MEICLKIEAA NGSSDGLNFN PMKEYMILSG PQKIAIAVLC TLLGLLSALE
ENSTTRP00000015298/1-360 MEICGKIQAG NGSTDGLDFN PMKDYMILSS SQKIAIAVLC TSLGILSALE
bmy_04555T0/1-360 MEICWKIQAA NGSIDGLDFN PMKDYMILSS SQKIAIAVLC TPLGLLSALE
BACU005776/1-246 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000442830/1-360 NVAVLYLILS SHQLRRKPSY LFIGSLAGAD FLASVVFACS FVNFHVFHGV
ENSBTAP00000025809/1-361 NLVVLYLIGS SHRLRKKPSY LFIGSLAGAD FLASVVFASS FVHFHVFDGV
ENSTTRP00000015298/1-360 NLVVLYLILS SHRLRRKPSY LFIGSLAGAD FLASAVFAFN FVNFHVFHGF
bmy_04555T0/1-360 NLVVLYLILS SHRLRRKPSY LFIGSLAGAD FLASVVFAFN FVYFHVFHGV
BACU005776/1-246 ---------- ---------- ---------- ---------- ----------
101 150
ENSP00000442830/1-360 DSKAVFLLKI GSVTMTFTAS VGSLLLTAID RYLCLRYPPS YKALLTRGRA
ENSBTAP00000025809/1-361 DSKAVFLLKI GSVTLTFTAS LGSLLLTAID RYLCLRYPPT YKALLTRRRA
ENSTTRP00000015298/1-360 DSKAVFLLKI GSVTMTFTAS VGSLLLTAID RYLCLHYPPT YKALLTRGRA
bmy_04555T0/1-360 DSKAVFLLKI GSVTMTFTAS VGSLLLTAID RYLCLRYPPT YKALLTRGRA
BACU005776/1-246 ---------- ----MTFTAS VGSLLLTAVD RYLCLRYPPT YKALLTRGRA
151 200
ENSP00000442830/1-360 LVTLGIMWVL SALVSYLPLM GWTCCPRPCS ELFPLIPNDY LLSWLLFIAF
ENSBTAP00000025809/1-361 LVTLGIMWVL AALVSYLPLM GWTCCPRPCS ELFPLIPNDY LLGWLLFIAA
ENSTTRP00000015298/1-360 LVTLGIMWVL SALVSSLPLM GWTCCPRPCS ELFPLIPNDY LLGWLLFIAV
bmy_04555T0/1-360 LVTLGIMWVL SALVSSLPLM GWTCCPRPCS ELFPLIPNDY LLGWLLFIAV
BACU005776/1-246 LVTLGIMWVL SALVSSLPLM GWTCCPKPCS ELFPLIPNDY LLGWLLFIAV
201 250
ENSP00000442830/1-360 LFSGIIYTYG HVLWKAHQHV ASLSGHQDRQ VPGMARMRLD VRLAKTLGLV
ENSBTAP00000025809/1-361 LFAGIIYTYA HVLWKAHQHV ASLAEHRDRH LSGIARMRLD VRLAKTLGML
ENSTTRP00000015298/1-360 LFSGIIYTYA HVLWKARQHV TSLAEHRDRQ VLGMARMRLD VWLAKTLGVL
bmy_04555T0/1-360 LFSGITYTYA HVLWKARQHV ASLAEHRDRQ VLGMARMRLD VRLAKTLGVL
BACU005776/1-246 LFSGIIYTYA HVLWKAHQHV ASLAEHRDRQ VLGMARMRLD VRLAKTLGVL
251 300
ENSP00000442830/1-360 LAVLLICWFP VLALMAHSLA TTLSDQVKKA FAFCSMLCLI NSMVNPVIYA
ENSBTAP00000025809/1-361 LAVLFIFWFP VLALMVYSLG ARLSDQVKKV FAFCSLLCLV NSMVNPIIYA
ENSTTRP00000015298/1-360 LAVLLICWVP VLTLMVYSLA TTLSKQVKEV FAFCSLLCLV NSMVNPIIYA
bmy_04555T0/1-360 LAVLFICWLP VLTLMVYSLA TTLSKQVKEV FAFCSLLCLV NSMVNPIIYA
BACU005776/1-246 LAVLFTCWVP VLTLMVYSLA ITPSKQVKKV FAFCSLLCLV NSMVNPIIYA
301 350
ENSP00000442830/1-360 LRSGEIRSSA HHCLAHWKKC VRGLGSEAKE EAPRSSVTET EADGKITPWP
ENSBTAP00000025809/1-361 LRSGEIRSSA HHRLARWKKC VRGLGPEGKG EIPRSSVTET EADVKTTPGL
ENSTTRP00000015298/1-360 LRSGEIRSSA RHRLAHWRKC LRGLGPEGKE EFPRSSVTET EADVKITPGP
bmy_04555T0/1-360 LQSGEIRSSA HHRLAHWKKC LRGLGPEGKE EVPRSSVTET EADVKITLGP
BACU005776/1-246 LRSGEIRSSA HHRLAHWKKC LRGLGPEGKE EVPRSSVTET EADVKITLGP
351 400
ENSP00000442830/1-360 DSRDLDLSDC -
ENSBTAP00000025809/1-361 DSRELSWPDE L
ENSTTRP00000015298/1-360 DSRELYCSNH -
bmy_04555T0/1-360 DSRELYCSDH -
BACU005776/1-246 DSRELYCSDH -