KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:24 2014 Check: 00 .. Name: ENSP00000294964/1-493 Len: 501 Check: 3414 Weight: 1.00 Name: bmy_00358T0/1-402 Len: 501 Check: 5480 Weight: 1.00 Name: ENSTTRP00000012016/1-280 Len: 501 Check: 521 Weight: 1.00 Name: ENSBTAP00000025826/1-496 Len: 501 Check: 797 Weight: 1.00 Name: BACU001610/1-294 Len: 501 Check: 8326 Weight: 1.00 // 1 50 ENSP00000294964/1-493 MRRRRAAVAA GFCASFLLGS VLNVLFAP-G SEPPRPGQSP EPSPAPGPGR bmy_00358T0/1-402 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012016/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025826/1-496 SSGPQAAQST GALLQLLLRA MVVVLCLPVQ EEPPRPGQSP GPSPAPGPGR BACU001610/1-294 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000294964/1-493 RGGRGELARQ IRARYEEVQR YSRGGPGPGA GRPERRRLMD LAPGGPGLPR bmy_00358T0/1-402 ---------- ---------- ---------- --------MD LAPGGPGLQR ENSTTRP00000012016/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025826/1-496 RGGRGELARQ IRARYEEVQR YSRGGPGPGA GRPERRRLMD LAPGGPGLQR BACU001610/1-294 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000294964/1-493 PRPPWARPLS DGAPGWPPAP GPGSP----- GPGPRLGCAA LRNVSGAQYM bmy_00358T0/1-402 PRPPRARPLP DGAPGWPPAP GPGSPGPGSS GPGPRLGCAA LRNVSGAQYV ENSTTRP00000012016/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025826/1-496 PRPPRARPLP DGAPGWPPAP GPGSP----- GPGPRLGCAA LRNVSGAQYL BACU001610/1-294 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000294964/1-493 GSGYTKAVYR VRLPGGAAVA LKAVDFSGHD LGSCVREFGV RRGCYRLAAH bmy_00358T0/1-402 GSGYTKAVYR VRLPGGVAVA LKAVDFSGHD LGSCVREFGA RRGCYRLAAH ENSTTRP00000012016/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025826/1-496 GSGYTKAVYR VRLPGGAAVA LKAVDFSGHD LGSCVREFGA RRGCYRLAAH BACU001610/1-294 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000294964/1-493 KLLKEMVLLE RLRHPNVLQL YGYCYQDSED IPDTLTTITE LGAPVEMIQL bmy_00358T0/1-402 KLLKEMVLLE RLRHPNVLQL YGYCYQDSED IPDTLTTITE LGAPVEMIQL ENSTTRP00000012016/1-280 ---------- ---------L YGYCYQDSED IPDTLTTITE LGAPVEMIQL ENSBTAP00000025826/1-496 KLLKEMVLLE RLRHPNVLQL YGYCYQDSED IPDTLTTITE LGAPVEMIQL BACU001610/1-294 -----MVLLE RLRHPNVLQL YGYCYQDSED IPDTLTTITE LGAPVEMIQL 251 300 ENSP00000294964/1-493 LQTSWEDRFR ICLSLGRLLH HLAHSPLGSV TLLDFRPRQF VLVDGELKVT bmy_00358T0/1-402 LQTSWEDRFR ICLSLGRLLH HLAHSPLGSV TLLDFRPRQF VLVDGELKVT ENSTTRP00000012016/1-280 LQTSWEDRFR ICLSLGRLLH HLAHSPLGSV TLLDFRPRQF VLVDGELKVT ENSBTAP00000025826/1-496 LQTSWEDRFR ICLSLGRLLH HLAHSPLGSV TLLDFRPRQF VLVDGELKVT BACU001610/1-294 LQTSWEDRFR ICLSLGRLLH HLAHSPLGSV TLLDFRPRQF VLVDGELKVT 301 350 ENSP00000294964/1-493 DLDDARVEET PCAGSTDCIL EFPARNFTLP CSAQGWCEGM NEKRNLYNAY bmy_00358T0/1-402 DLDDARVEET PCTGSADCTL EFPARNFTLP CSAQGWCEAM NEKRNLYNAY ENSTTRP00000012016/1-280 DLDDARVEET PCTGSADCTL EFPARNFTLP CSAQGWCEAM NEKRNLYNAY ENSBTAP00000025826/1-496 DLDDARVEET PCTGNADCIL EFPARNFTLP CSAQGWCEAM NEKRNLYNAY BACU001610/1-294 DLDDARVEET PCTGSADCTL EFPARNFTLP CSAQGWCEAM NEKRNLYNAY 351 400 ENSP00000294964/1-493 --RFFFTYLL PHSAPPSLRP LLDSIVNATG ELAWGVDETL AQLEKVLHLY bmy_00358T0/1-402 --RFFFTYLL PHSAPPSLRP LLDSIVNATG ELTWGVDETL AQLEKVLHLY ENSTTRP00000012016/1-280 --XXXXXXXX XXXAPPSLRP LMDSIVNATG ELTWGVDETL AQLEKVLHLY ENSBTAP00000025826/1-496 SPRFFFTYLL PHSAPPSLRP LLDSIVNATG ELAWGVDETL AQLEKVLHLY BACU001610/1-294 --RFFFTYLL PHSAPPSLRP LLDGIVNATG ELTWGVDETL AQLEKVLHLY 401 450 ENSP00000294964/1-493 RSGQYLQNST ASSSTEYQCI PDSTIPQEDY RCWPSYHHGS CLLSVFNLAE bmy_00358T0/1-402 RSGQYLQNST EAGRAEYQHL PGSTIPQEDY RCWPSYHHGS CLLSVFNLAE ENSTTRP00000012016/1-280 RSGQYLQNST EAGRAEYQHL PGSTIPQEDY RCWPSYHHGS CLLSVFNLAE ENSBTAP00000025826/1-496 RSGQYLQNST AGSQAEYQRL PDSTIPQEDY RCWPSYHHGG CLLSVFNLAE BACU001610/1-294 RSGQYLHNST EAGRAEYQHL PGSTIPQEDY RCWPSYHHGS CLLSVFNLAE 451 500 ENSP00000294964/1-493 AVDVCESHAQ CRAFVVTNQT TWTGRQLVFF KTGWSQVVPD PNKTTYVKAS bmy_00358T0/1-402 AVDICESHAQ CQAFVVTNQT TWTGEPVG-- KDILREVTGL PGRD------ ENSTTRP00000012016/1-280 AVDICESHAQ CQAFVVTNQT TWTGRQLVFF KTGWSHVVPD PSKTTYVRAS ENSBTAP00000025826/1-496 AVDICENHAQ CQAFVVTNQT TWTGRQLVFF KTGWSHVVPD PSKTTYVRAS BACU001610/1-294 AVDICESHAQ CQAFVVTNQT TWTGRQLVFF KTGWSHVVPD ASKTAYVRAS 501 550 ENSP00000294964/1-493 G bmy_00358T0/1-402 - ENSTTRP00000012016/1-280 G ENSBTAP00000025826/1-496 G BACU001610/1-294 G