KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:24 2014 Check: 00 .. Name: ENSP00000178638/1-354 Len: 438 Check: 9060 Weight: 1.00 Name: ENSBTAP00000025837/1-321 Len: 438 Check: 4353 Weight: 1.00 Name: bmy_19713T0/1-434 Len: 438 Check: 7049 Weight: 1.00 Name: BACU001040/1-291 Len: 438 Check: 6486 Weight: 1.00 Name: ENSTTRP00000001362/1-356 Len: 438 Check: 1737 Weight: 1.00 // 1 50 ENSP00000178638/1-354 ---------M PRRSLHAAAV LLLVILKEQP SSPAPVNGSK WTYFGPDGEN ENSBTAP00000025837/1-321 ---------- ---------- ---------- ---------- ----GPDGEK bmy_19713T0/1-434 MVLWSMARVP RRRGVPSPSA LELEGEEKTL VENGSSHGPE SLLPGPEGEK BACU001040/1-291 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001362/1-356 ---------M PLRSLHAAAV LLLVVLKEQP SNPTPHNGSK WTYIGPDGET 51 100 ENSP00000178638/1-354 SWSKKYPSCG GLLQSPIDLH SDILQYDASL TPLEFQGYNL SANKQFLLTN ENSBTAP00000025837/1-321 SWSKTYPSCG GLLQSPIDLH DDILRYNASL RPLAFQGYNQ SASPQFVLTN bmy_19713T0/1-434 SWSKSYPSCG GLMQSPIDLH NDILRYNASL VPLGFQGYSE SADQQFVLTN BACU001040/1-291 ---------- --MQSPIDLH NDILQYNASL VPLGLQGYSE SADQQFVLTN ENSTTRP00000001362/1-356 SWSKSYPLCG GLMQSPIDLQ DDILQYNASL VPLGFQGYSE SANQQFVLTN 101 150 ENSP00000178638/1-354 NGHSVKLNLP SDMHIQGLQS RYSATQLHLH WGNPNDPHGS EHTVSGQHFA ENSBTAP00000025837/1-321 NGHSVKVKLP KDMQVRGLGA RYNASQLHLH WGDKNDPHGS EHTVGGEHFA bmy_19713T0/1-434 NGHSVKLKLP EDMHIQGLGA RYNASQLHLH WGDQNEPHGS EHTVGGKHFA BACU001040/1-291 NGHSVKLKLP QDMHIQGLGA RYNASQLHLH WGDQNEPHGS EHTVGGKHFA ENSTTRP00000001362/1-356 NGHSVKLKLP KDMHIQGLGA RYNASQLHLH WGDENEPHGS EHTVGGKHFA 151 200 ENSP00000178638/1-354 AELHIVHYNS DLYPDASTAS NKSEGLAVLA VLIEMGSFNP SYDKIFSHLQ ENSBTAP00000025837/1-321 AELHIVYYNS DRYPNDSFAK DKPEGLAVVA VLIEVGSSNP AYDKIFDHLK bmy_19713T0/1-434 AELHMVYYNS DLYPNASIAK DKPEGLAVLA VLIEMGSFNP SYDKIFNHLK BACU001040/1-291 AELHMVYYNS DLYPNASIAS DKPEGLAVLA VLIEMGSFNP SYDKIFSHLK ENSTTRP00000001362/1-356 AELHMVFYNS DLYPNASIAS DKPEGLAVLA VLIEVGSFNP SYDKIFSHLK 201 250 ENSP00000178638/1-354 HVKYKGQEAF VPGFNIEELL PERTAEYYRY RGSLTTPPCN PTVLWTVFRN ENSBTAP00000025837/1-321 DVKYKGQEVF IPGFSIEELL PERPEEYYRY RGSLTTPPCY PTVLWTVFRN bmy_19713T0/1-434 DVKYKGQEVS IPGFSIEELL PKRPEEYYRY RGSLTTPPCY PTVLWTVFRN BACU001040/1-291 DVKYKGQEVS IPGFSIEELL PKRPEEYYRY RGSLTTPPCY PTVLWTVFRN ENSTTRP00000001362/1-356 DVKYKGQEVS IPGFSIEELL PKRPEEYYRY RGSLTTPPCY PTVLWTVFRN 251 300 ENSP00000178638/1-354 PVQISQEQLL ALETALYCTH MDDPSPREMI NNFRQVQKFD ERLVYTSFSQ ENSBTAP00000025837/1-321 PVQISQEQLM KLETDLYCTH MDDPSPREMV NNFRRVQKFD ERLVYVSFQQ bmy_19713T0/1-434 PVQISQQQLV DLETALYCTR VDDPSPREMI NNFRQVQKFD ERLVYVSFRQ BACU001040/1-291 PVQISQQQLV DLETALYCTR VDDPFPREMI NNFRQVQKFD ERLVYVSFRQ ENSTTRP00000001362/1-356 PVEISQQQLT NLETALYCTR VEDPSPREMI NNFRQVQKFD ERLVYVSFRR 301 350 ENSP00000178638/1-354 -VQVCTAAGL SLGI------ ---------- ---ILSLALA G------ILG ENSBTAP00000025837/1-321 EVPDPPCTGL SPGI------ ---------- ---VLSVALA C------GLG bmy_19713T0/1-434 -GPDPTYTGL SLAAKKLPTK ESSTNRPSSR RLRPMPEALA CPGVSKEGLG BACU001040/1-291 ---------- --GI------ ---------- ---ALSVALA G------VLG ENSTTRP00000001362/1-356 EGPDATYTGP SLGI------ ---------- ---VLFVALA G------VLG 351 400 ENSP00000178638/1-354 ICIVVVVSIW LFRR-KSIK- ---------K GDNKGVIYKP ATKM------ ENSBTAP00000025837/1-321 ICIVLAVSIW LLRRRKSSK- ---------K GANKGVIYKP AIKQ------ bmy_19713T0/1-434 FGHNL---LW LPGHLKYLRV LWSSTHKHPR HLGDPTILMP CHPQWERGWG BACU001040/1-291 ISMVLAVSIW LFRRKKSGK- ---------K VANKGVIYKP AIKQ------ ENSTTRP00000001362/1-356 ICIVLAVSIW LFRRKKSSK- ---------K VANKGVIYKP AIKQ------ 401 450 ENSP00000178638/1-354 ---------- ----ETEAHA ---------- -------- ENSBTAP00000025837/1-321 ---------- ----ETEAHA ---------- -------- bmy_19713T0/1-434 ELASEVGSLS CLLRECETMK WSGFWEHKPR RPLRAVTG BACU001040/1-291 ---------- ----ETKAHA ---------- -------- ENSTTRP00000001362/1-356 ---------- ----DAEAHV ---------- --------