KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:26 2014 Check: 00 .. Name: ENSP00000419370/1-234 Len: 234 Check: 2568 Weight: 1.00 Name: ENSBTAP00000025851/1-234 Len: 234 Check: 2294 Weight: 1.00 Name: bmy_14516T0/1-172 Len: 234 Check: 4495 Weight: 1.00 Name: BACU019511/1-233 Len: 234 Check: 1382 Weight: 1.00 Name: ENSTTRP00000008461/1-234 Len: 234 Check: 2594 Weight: 1.00 // 1 50 ENSP00000419370/1-234 MGPGGRVARL LAPLMWRRAV SSVAGSAVGA EPGLRLLAVQ RLPVGAAFCR ENSBTAP00000025851/1-234 MGPGSSVALR LWVQLYRRAV FPRAWPASSA APRLRLLAVG RPTARATLGR bmy_14516T0/1-172 ---------- ---------- ---------- ---------- ---------M BACU019511/1-233 MGPWGCVALR LGALLWRRAF SPGAWPAAAA GLRLRLLSVG RLPVGPTLGR ENSTTRP00000008461/1-234 MGSRGCVALR LGVLLWRRAF SPGAWPAAAA GLRLRLLSVG RLPVGPTLGK 51 100 ENSP00000419370/1-234 ACQTPNFVRG LHSEPGLEER AEGTVNEGRP ESDAADHTGP KFDIDMMVSL ENSBTAP00000025851/1-234 ACLAPDRARG LHGGPGLEEQ AEGTAGEGLP ESGTADHAGP KFDIDMLVSL bmy_14516T0/1-172 SSSASPRDCG EDRGAALGD- ---------- --DTRDHTGP KFDIDMLVSL BACU019511/1-233 VCPAHDRARG LHGGPGLEER AEGTAGEGRP ESGTADHTGP KFDIDMLV-L ENSTTRP00000008461/1-234 VCPAPDRARG LHGGPGLEER AEGTAGEGRP ESGTGDHTGP KFDIDMLVSL 101 150 ENSP00000419370/1-234 LRQENARDIC VIQVPPEMRY TDYFVIVSGT STRHLHAMAF YVVKMYKHLK ENSBTAP00000025851/1-234 LRQENARDIC VIKVPPEMKY TDYFVIGSGT STRHLHAMAH YIVKMYKHLK bmy_14516T0/1-172 LRQENARDIC VIKVPPEMEY TDYFVIGSGT STRHLHAMAY YIVKMYKYLK BACU019511/1-233 LRQENARDIC VIKVPPEMEY TDYFVIGSGT STRHLHAMAY YIVKMYKYLK ENSTTRP00000008461/1-234 LRQENARDIC VIKVPPEMKY TDYFVIGSGT STRHLHAMAY YIVKMYKYLK 151 200 ENSP00000419370/1-234 CKRDPHVKIE GKDTDDWLCV DFGSMVIHLM LPETREIYEL EKLWTLRSYD ENSBTAP00000025851/1-234 YKSEPHVKIE GKDTDDWLCV DFGSMVIHLM LPETRETYEL EKLWTLRSYD bmy_14516T0/1-172 CKSEPHVKIE GKDTDDWLCV DFGSMVIHLM LPETRETYEL EKLWTLRSYD BACU019511/1-233 CKSEPHVKIE GKDTDDWLCV DFGSMVIHLM LPETREIYEL EKLWTLRSYD ENSTTRP00000008461/1-234 HKSEPHVKIE GKDTDDWLCV DFGSMVIHLM LPETRETYEL EKLWTLRSYD 201 250 ENSP00000419370/1-234 DQLAQIAPET VPEDFILGIE DDTSSVTPVE LKCE ENSBTAP00000025851/1-234 DQLAQIAPET LPEDFILGIE DDTSSVTPVE FKYE bmy_14516T0/1-172 DQLAQIAPET LPEDFILGIE DDTSSLAPVE FKCE BACU019511/1-233 DQLAQIAPET LPEDFILGIE DDTSSLAPVE FKCE ENSTTRP00000008461/1-234 DQLAQIAPET LPEDFILGIE DDTSSLAPVE FKCE