KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:27 2014 Check: 00 .. Name: ENSTTRP00000003930/1-459 Len: 485 Check: 4195 Weight: 1.00 Name: ENSP00000383936/1-460 Len: 485 Check: 5427 Weight: 1.00 Name: ENSBTAP00000025858/1-476 Len: 485 Check: 5011 Weight: 1.00 Name: bmy_05561T0/1-446 Len: 485 Check: 2146 Weight: 1.00 Name: BACU014201/1-475 Len: 485 Check: 6689 Weight: 1.00 // 1 50 ENSTTRP00000003930/1-459 ---------M SELMHSIVGS YRKPPERVFV PSIAQSVESS QTHYSVNLEV ENSP00000383936/1-460 --------MD SELMHSIVGS YHKPPERVFV PSFTQ-NEPS QNCHPANLEV ENSBTAP00000025858/1-476 --------MD SELMHSIVGS YLKPPERVCV PSITRSDESS QTHYSVNLEL bmy_05561T0/1-446 MTSTEVQIMD SELMHSIVGS YLKPPERVFV PSVTQSDESS QTHYSVNLEV BACU014201/1-475 --------MD SXXXXXXX-X XXXXXXXXXX XXXTQSDESS QTHYSVNLEV 51 100 ENSTTRP00000003930/1-459 TSPKMLRSPN SQALILALKT LQEKIHRLEL ERTQAEDNLN ILSREAAQYK ENSP00000383936/1-460 TSPKILHSPN SQALILALKT LQEKIHRLEL ERTQAEDNLN ILSREAAQYK ENSBTAP00000025858/1-476 TSSQMLRSPN SQALILALKT LQEKIHRLEL ERTQAEDNLN ILSREAAQYK bmy_05561T0/1-446 TSPKMLHSPN SQALILALKT LQEKIHRLEL ERTQAEDNLN ILSREAAQYK BACU014201/1-475 TSSKMLHSPN SQALILALKT LQEKIHRLEL ERTQAEDNLN ILSREAAQYK 101 150 ENSTTRP00000003930/1-459 KALEDETKER NLAHEELIKQ KKXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000383936/1-460 KALENETNER NLAHQELIKQ KKDISIQLSS AQSRCTLLEK QLEYTKRMVL ENSBTAP00000025858/1-476 KALENETSER NLAHEELIKQ KKDISMQLSS AQSRCILLEK QLEYTKRMVL bmy_05561T0/1-446 KALEDETKER NLAHEELIKQ KKDISMQLSS AQSHCTLLEK QLEYTKRMVL BACU014201/1-475 KALEDETKER NLAHEELIKQ KKDISMQLSS AQSHCTLLEK QLEYTKRMVL 151 200 ENSTTRP00000003930/1-459 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000383936/1-460 NVEREKNMIL EQQAQLQREK EQDQMKLYAK LEKLDVLEKE CFRLTTTQKT ENSBTAP00000025858/1-476 NVEREKNMIL EQQAQLQREK EQDHMKLHAK LAKLDVLEKE CFKLTTTQKT bmy_05561T0/1-446 N--------- ---AQLQREK EQDHMKLQAK LEKLDVLEKE CFKLTTTQKT BACU014201/1-475 NVEREKNMIL EQQAQLQREK EQDHMKLQAK LEKLDVLEKE CFKLTTTQKT 201 250 ENSTTRP00000003930/1-459 XXGKIKHLEE KLKEEEHQRK LFQDKASQLQ TELEISRILM SSVSNPKRSK ENSP00000383936/1-460 AEDKIKHLEE KLKEEEHQRK LFQDKASELQ TGLEISKIIM SSVSNLKHSK ENSBTAP00000025858/1-476 AEDKIKHLEE KLKEEEHQRK LFQDKASQLQ TGLEISRILM SSVTNPRHFK bmy_05561T0/1-446 AEGKIKHLEE KLKEEEHQRK LFQDKASQLQ TGLEISRIFM SSVSNPKCSK BACU014201/1-475 AEGKIKHLEE KLKEEEHQRK LFQDKASQLQ TGLEISRILM SSVSNPKCSK 251 300 ENSTTRP00000003930/1-459 EKKKSSKKTK CLKRGPPQQI YSKFGSLPIV AEK------- ---------T ENSP00000383936/1-460 EKKKSSKKTK CIKRRPPWQI CSKFGALPFV AEK------- ---------M ENSBTAP00000025858/1-476 EKKKSSKKIK CLKRRPPQQI CSKFETLPIM AEKSASASHS ANASTHSLQT bmy_05561T0/1-446 EKKKSS---- ---------- ---------- --KSASAGHS RNASTQNLQT BACU014201/1-475 EKKKSSKKTK CLKRGPPQQI YSKFGSLPIV AEKSASAGHS RNASTQNLQT 301 350 ENSTTRP00000003930/1-459 MQHYRPHILQ KLAEVSEPRC LYKPSKSTSQ CEAVPSDSEK SISVCNNLSE ENSP00000383936/1-460 RQHRDPHILQ KPFNVTETRC LPKPSRTTSW CKAIPPDSEK SISICDNLSE ENSBTAP00000025858/1-476 VQHSGPHILQ KPAEVTELRC LYKPSRTTSQ CKAVPSDSEK SISICHNLSE bmy_05561T0/1-446 MQHYRPHILQ KLAEVSEPRC LYKPSRTTSQ CEAVPSDSEK SISMCNNLSE BACU014201/1-475 MQHYRPHILQ KLAEVSEPRC LYKPSRTTSQ CEAVPSDSEK SISICNNLSE 351 400 ENSTTRP00000003930/1-459 LLMAMQDELD QMTMEYQDLL NQMKETESQS VCENIECELE HLVKKMEIKG ENSP00000383936/1-460 LLMAMQDELD QMSMEHQELL KQMKETESHS VCDDIECELE CLLKKMEIKG ENSBTAP00000025858/1-476 LLMAMQDELD QMTMGYQDLL NQMKETESQS VCEDIECELE RLVKKMEIKG bmy_05561T0/1-446 LLMXMQDELD QMTMEYQDLL NQMKETESQS VCENIECELE HLVKKMEIKG BACU014201/1-475 LLMAMQDELD QMTMEYQDLL NQMKETESQS VCENIECELE HLVKKMEIKG 401 450 ENSTTRP00000003930/1-459 EQISKLMKHQ DNVCKLQQKV QNLKMSEASA IQKEDSNCKG SKNIKNSPRK ENSP00000383936/1-460 EQISKLKKHQ DSVCKLQQKV QNSKMSEASG IQQEDSYPKG SKNIKNSPRK ENSBTAP00000025858/1-476 EQISKLMQHQ ESVRKLQQKV QNSKMSETSA IQQEDSNCKG TKNIKNSSRK bmy_05561T0/1-446 EQISKLMKHQ DSVRKLQQKV QNSKMSEASA IQKEDSNCKG SKNIKNSPRK BACU014201/1-475 EQISKLMKHQ DSVRKLQQKV QNSKMGEAST IQKEDSNCKG SKNIKNSPRK 451 500 ENSTTRP00000003930/1-459 CLL-TNSPQK NSNFPPIRVH NLQMKLRRDD IMWEQ ENSP00000383936/1-460 CLTDTNLFQK NSSFHPIRVH NLQMKLRRDD IMWEQ ENSBTAP00000025858/1-476 CLL-TNSLQK NNNCRPIRVH NLQMKLRRDD IMWEQ bmy_05561T0/1-446 CLL-TNSPQK NRNFXPVRVH NLQMKLRRDD IMWEQ BACU014201/1-475 CLL-TNSPQK NSNLRPIRVH NLQMKLRRDD IMWEQ