KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:27:28 2014 Check: 00 .. Name: ENSP00000299314/1-1256 Len: 1267 Check: 408 Weight: 1.00 Name: ENSBTAP00000025859/1-1249 Len: 1267 Check: 3023 Weight: 1.00 Name: bmy_08314T0/1-898 Len: 1267 Check: 2860 Weight: 1.00 Name: BACU000928/1-1210 Len: 1267 Check: 6986 Weight: 1.00 // 1 50 ENSP00000299314/1-1256 MLFKLLQRQT YTCLSHRYGL YVCFLGVVVT IVSAFQFGEV VLEWSRDQYH ENSBTAP00000025859/1-1249 MLLKLLQRQT YTCLSHRYGL YVCFVGVVVT IVSAFQFGEV VLEWSRDQYH bmy_08314T0/1-898 ---------- ---------- ---------- ---------- ---------- BACU000928/1-1210 ---------- ---------- ---------- ------MGST SVSWAS---- 51 100 ENSP00000299314/1-1256 VLFDSYRDNI AGKSFQNRLC LPMPIDVVYT WVNGTDLELL KELQQVREQM ENSBTAP00000025859/1-1249 VLFDSYRDNI AGKSFQNRLC LPMPIDVVYT WVNGTDLELL KELQQVREQM bmy_08314T0/1-898 ---------- ---------- ---------- ---------- ---------- BACU000928/1-1210 -LSPSSR--- --PSSSERLC LPMPIDVVYT WVNGTDLELL KELQQVREQM 101 150 ENSP00000299314/1-1256 EEEQKAMREI LGKNTTEPTK KSEKQLECLL THCIKVPMLV LDPALPANIT ENSBTAP00000025859/1-1249 EEEQKAMREI LGKNTTEPTK KSEKPLECLL THCIKVPMLV LDPALPTNVT bmy_08314T0/1-898 ---------- ---------- ---------- ---------- ---------- BACU000928/1-1210 EEEQKAMREI LGKNTTEPTK KSEKQLECLL THCIKVPMLV LDPALPTNIT 151 200 ENSP00000299314/1-1256 LKDLPSLYPS FHSASDIFNV AKPKNPSTNV SVVVFDSTKD VEDAHSGLLK ENSBTAP00000025859/1-1249 LKDLPSLYPS FHSASDVFNV AKPKNPSTNV SVVVFDTTKS VEDAQAGMFK bmy_08314T0/1-898 ---------- ---------- ---------- ---------- ---------- BACU000928/1-1210 LKDLPSLYPS FHSASDIFNV AKPKNPSTNV SVVVFDSTKN VEDAHTGIFK 201 250 ENSP00000299314/1-1256 GNSRQTVWRG YLTTDKEVPG LVLMQDLAFL SGFPPTFKET NQLKTKLPEN ENSBTAP00000025859/1-1249 GNSRQTVWRG YLTTDKEVPG LVLMQDLAFL SGFPPTFKET NQLKAKLPEN bmy_08314T0/1-898 ---------- ---------- ---------- ---------- ---------- BACU000928/1-1210 GNSRQTVWRG YLTTDKEVPG LVLMQDLAFL SGFPPTFKET NQLKTKLPEN 251 300 ENSP00000299314/1-1256 LSSKVKLLQL YSEASVALLK LNNPKDFQEL NKQTKKNMTI DGKELTISPA ENSBTAP00000025859/1-1249 LSSKIKLLQL YSEASVALLK LNNPKDFQEL NKQTKKNMTI NGKELTISPA bmy_08314T0/1-898 ---------- ---------- ---------- -------MTI NGKELTISPA BACU000928/1-1210 LSSKIKLLQL YSEASVALLK LNNPKDFQEL NKQTKKNMTI NGKELTISPA 301 350 ENSP00000299314/1-1256 YLLWDLSAIS QSKQDEDISA SRFEDNEELR YSLRSIERHA PWVRNIFIVT ENSBTAP00000025859/1-1249 YLLWDLSAIS QSKQDEDVSA SRFEDNEELR YSLRSIERHA PWVRNIFIVT bmy_08314T0/1-898 YLLWDLSAIS QSKQDEDVSA SRFEDNEELR YSLRSIERHA PWVRNIFIVT BACU000928/1-1210 YLLWDLSAIS QSKQDEDVSA SRFEDNEELR YSLRSIERHA PWVRNIFIVT 351 400 ENSP00000299314/1-1256 NGQIPSWLNL DNPRVTIVTH QDVFRNLSHL PTFSSPAIES HIHRIEGLSQ ENSBTAP00000025859/1-1249 NGQIPSWLNL DNPRVTIVTH QDVFRNLSHL PTFSSPAIES HIHRIEGLSQ bmy_08314T0/1-898 NGQIPSWLNL DNPRVTIVTH QDVFRNLSHL PTFSSPAIES HIHRIEGLSQ BACU000928/1-1210 NGQIPSWLNL DNPRVTIVTH QDVFRNLSHL PTFSSPAIES HIHRIEGLSQ 401 450 ENSP00000299314/1-1256 KFIYLNDDVM FGKDVWPDDF YSHSKGQKVY LTWPVPNCAE GCPGSWIKDG ENSBTAP00000025859/1-1249 KFIYLNDDVM FGKDVWPDDF YSHSKGQKVY LTWPVPNCAE GCPGSWIKDG bmy_08314T0/1-898 KFIYLNDDVM FGKDVWPDDF YSHSKGQKTV ST-------- --------AG BACU000928/1-1210 KFIYLNDDVM FGKDVWPDDF YSHSKGQKVY LTWPVPNCAE GCPGSWIKDG 451 500 ENSP00000299314/1-1256 YCDKACNNSA CDWDGGDCSG NSGGSRYIAG GGGTGSIGVG QPWQFGGGIN ENSBTAP00000025859/1-1249 YCDKACNNSA CDWDGGDCSG NSGASRYIAG AGGTGSIGVG QPWHFGAGMT bmy_08314T0/1-898 FCFPP----- ------PXPG NSGVGRYAGG GGGTGGIGVG QPWHFGGGIS BACU000928/1-1210 YCDKACNNSA CDWDGGDCSG NSGAGRYAGG GGGTGGIGVG QPWHFGGGIS 501 550 ENSP00000299314/1-1256 SVSYCNQGCA NSWLADKFCD QACNVLSCGF DAGDCGQDHF HELYKVILLP ENSBTAP00000025859/1-1249 GVSYCNQGCA NSWLADKFCD QACNVLSCGF DAGDCGQDHF HELYKVTLLP bmy_08314T0/1-898 GVSYCNQGCA NSWLADKFCD QACNVLSCGF DAGDCGQDHF HELYKVTLLP BACU000928/1-1210 GVSYCNQGCA NSWLADKFCD QACNVLSCGF DAGDCGQDHF HELYKVTLLP 551 600 ENSP00000299314/1-1256 NQTHYIIPKG ECLPYFSFAE VAKRGVEGAY SDNPIIRHAS IANKWKTIHL ENSBTAP00000025859/1-1249 NQTHYVVPKG ECLPYFSFAE IAKKGIEGAY SDNPIIRHAS IANKWKTIHL bmy_08314T0/1-898 NQTHYVIPKG ECLPYFSFAE IAKRGIEGAY SDNPIIRHAS IANKWKTIHL BACU000928/1-1210 NQTHYVIPKG ECLPYFSFAE IAKRGVEGAY SDNPIIRHAS IANKWKTIHL 601 650 ENSP00000299314/1-1256 IMHSGMNATT IHFNLTFQNT NDEEFKMQIT VEVDTREGPK LNSTAQKGYE ENSBTAP00000025859/1-1249 LMHSGMNATT IHFNLTLQGK NDEEFKIQIV VEVDTREEPK RNSTTQKAYQ bmy_08314T0/1-898 LMHSGMNATT IHFNLTFQST NDEEFRIQIA VEVDTREEPK RNSTTQKSYQ BACU000928/1-1210 LMHSGMNATT IHFNLTFQST NDEEFRIQIA VEVDTREEPK RNSTTQKSYQ 651 700 ENSP00000299314/1-1256 NLVSPITLLP EAEILFEDIP KEKRFPKFKR HDVNSTRRAQ EEVKIPLVNI ENSBTAP00000025859/1-1249 SSMSSTTLLP EAEILFEDIP EEKRFPKVKR HDVNTTRRFQ VEVEIPQVNI bmy_08314T0/1-898 SLVSPSALLP EVEILFEDIP EEKRFPKVKR HDVNTTGRFQ MEVQIPLVNI BACU000928/1-1210 SLVSPSALLP EVEILFEDIP EEKRFPKVKR HDVNTTGRFQ MEVQIPLVNI 701 750 ENSP00000299314/1-1256 SLLPKDAQLS LNTLDLQLEH GDITLKGYNL SKSALLRSFL MNSQHAKIK- ENSBTAP00000025859/1-1249 SLLPKETQLS LNNLDLQLER GDITMKGYNL SKSALLRSFL MNPQNGKLTV bmy_08314T0/1-898 SLLPKETQLS LNNLDLQLEH GDITMKGYNL SKSALLRSFL MNPQDAKLTI BACU000928/1-1210 SLLPKETQLS LNNLDLQLEH GDITMKGYNL SKSALLRSFL MNPQDAKLTI 751 800 ENSP00000299314/1-1256 NQAIITDETN DSLVAPQEKQ VHKSILPNSL GVSERLQRLT -FPAVSVKVN ENSBTAP00000025859/1-1249 NHPLTTEQRN GGLEAPLAKD AHKSNL---- GTSERRQGSS PVPAVTMTVN bmy_08314T0/1-898 NHPLMTEQRN DSLEAPLEKQ VHKSILPSSL GTSERFQGLL PFPAVTMTVN BACU000928/1-1210 NHPLMTEQRN DSLEAPLEKQ VHKSILPSSL GTSERFQGLL PFPAVTMTVN 801 850 ENSP00000299314/1-1256 GHDQGQNPPL DLETTARFRV ETHTQKTIGG NVTKEKPPSL IVPLESQMTK ENSBTAP00000025859/1-1249 NHSQSQIPPL E----ARFRA ITVTPKVGGR TVSREKLSSL TFPLESKDTQ bmy_08314T0/1-898 GHSQSQTAPL DLETKARFRS KTVTPKVGGG GVSKEKLSSL IFPLENRET- BACU000928/1-1210 GHSQSQTPPL DLETKARFRS KTVTPKVGGG -VSKEKLSSL IFPLENRET- 851 900 ENSP00000299314/1-1256 EKKITGKEKE NSRMEENAEN HIGVTEVLLG RKLQHYTDSY LGFLPWEKKK ENSBTAP00000025859/1-1249 EKVITGKEQE K-KIEENANS YPGGNEVVPG RKLQQYTDSY LGFLPWEKKK bmy_08314T0/1-898 EKVITGKEQE KNRMEENXNN YLGGNEVLPG RKLQHYTESY LGFLPWEKKK BACU000928/1-1210 EKVITGKEQE KNRMEENANN YLGGNEVLPG RKLQHYTESY LGFLPWEKKK 901 950 ENSP00000299314/1-1256 YFQDLLDEEE SLKTQLAYFT DSKNTGRQLK DTFADSLRYV NKILNSKFGF ENSBTAP00000025859/1-1249 YFQDLLDEEE SLKTQLAYFT DSKHTGRQLK DTFADSLRYV NKILNSKFGF bmy_08314T0/1-898 YFQDLLDEEE SLKTQLAYFT DSKHTGRQLK DTFADSLRYV NKILNSKFGF BACU000928/1-1210 YFQDLLDEEE SLKTQLAYFT DSKHTGRQLK DTFADSLRYV NKILNSKFGF 951 1000 ENSP00000299314/1-1256 TSRKVPAHMP HMIDRIVMQE LQDM------ ---FPEEFDK TSFHKVRHSE ENSBTAP00000025859/1-1249 TSRKVPAHMP HMIDRIVMQE LQDM------ ---FPEEFDK TSFHKVRHSE bmy_08314T0/1-898 TSRKVPAHMP HMIDRTVMQE LQDISHGMLH LDRFPEEFDK TSFHKVRHSE BACU000928/1-1210 TSRKVPAHMP HMIDRTVMQE LQDM------ ---FPEEFDK TSFHKVRHSE 1001 1050 ENSP00000299314/1-1256 DMQFAFSYFY YLMSAVQPLN ISQVFDEVDT DQSGVLSDRE IRTLATRIHE ENSBTAP00000025859/1-1249 DMQFAFSYFY YLMSAVQPLN ISQVFDEVDT DQSGILSDRE IRTLATRIHD bmy_08314T0/1-898 DMQFAFSYFY YLMSAVQPLN VSQVFDEVDT DQSGVLSDRE IRTLATRIHD BACU000928/1-1210 DMQFAFSYFY YLMSAVQPLN VSQVFDEVDT DQSGVLSDRE IRTLATRIHD 1051 1100 ENSP00000299314/1-1256 LPLSLQDLTG LEHMLINCSK MLPADITQLN NIPPTQESYY DPNLPPVTKS ENSBTAP00000025859/1-1249 LPLSLQDLTG LEHMLINCSK MLPANITQLN NIPPTQEAYY DPNLPPVTKS bmy_08314T0/1-898 LPLSLQDLTG LEHVLINCSK MLPANITQLN NIPPTQEAYY DPNLVSAMGS BACU000928/1-1210 LPLSLQDLTG LEHVLINCSK MLPANITQLN NIPPTQEAYY DPNLPPVTKS 1101 1150 ENSP00000299314/1-1256 LVTNCKPVTD KIHKAYKDKN KYRFEIMGEE EIAFKMIRTN VSHVVGQLDD ENSBTAP00000025859/1-1249 LVTNCKPVTD KIHKAFKDKN KYRFEIMGEE EIAFKMIRTN VSHVVGQLDD bmy_08314T0/1-898 FM-------- ---------- ---------- ---------- ---------- BACU000928/1-1210 LVTNCKPVTD KIHKAYKDKN KYRFEIMGEE EIAFKMIRTN VSHVVGQLDD 1151 1200 ENSP00000299314/1-1256 IRKNPRKFVC LNDNIDHNHK DAQTVKAVLR DFYESMFPIP SQFELPREYR ENSBTAP00000025859/1-1249 IRKNPRKFVC LNDNIDHNHK DAQTVKAVLR DFYESMFPIP SQFELPREYR bmy_08314T0/1-898 ------KFVC LNDNIDHNHK DAQTVKAVLR DFYESVFPIP SQFELPREYR BACU000928/1-1210 IRKNPRKFVC LNDNIDHNHK DAQTVKAVLR DFYESVFPIP SQFELPREYR 1201 1250 ENSP00000299314/1-1256 NRFLHMHELQ EWRAYRDKLK FWTHCVLATL IMFTIFSFFA EQLIALKRKI ENSBTAP00000025859/1-1249 NRFLHMHELQ EWRAYRDKLK FWTHCVLATL IMFTVFSFFA EQLIALKRKI bmy_08314T0/1-898 NRFLHMHELQ EWRVYRDKLK FWTHCVLATL IMFTVFSFFA EQLIALKRKI BACU000928/1-1210 NRFLHMHELQ EWRVYRDKLK FWTHCVLATL IMFTVFSFFA EQLIALKRKI 1251 1300 ENSP00000299314/1-1256 FPRRRIHKEA SPNRIRV ENSBTAP00000025859/1-1249 FPRRRIHKEA SPDRIRV bmy_08314T0/1-898 FPRRRIHKEA SPDRIKV BACU000928/1-1210 FPRRRIHKEA SPDRIKV