KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:30 2014 Check: 00 .. Name: ENSP00000331662/1-632 Len: 634 Check: 7391 Weight: 1.00 Name: ENSTTRP00000010142/1-619 Len: 634 Check: 6828 Weight: 1.00 Name: ENSBTAP00000025866/1-609 Len: 634 Check: 5740 Weight: 1.00 Name: bmy_10092T0/1-619 Len: 634 Check: 6933 Weight: 1.00 Name: BACU009088/1-619 Len: 634 Check: 7028 Weight: 1.00 // 1 50 ENSP00000331662/1-632 MSRVRDAGCV AAGIVIGAGA WYCVYKYTRG RDQ-TKKRMA KPKNRAVAGT ENSTTRP00000010142/1-619 MSRVRDAGCV AAGIVIGASA WYCVYKYARG RNQ-MKKRLA KPKTRAVAGT ENSBTAP00000025866/1-609 MSRVRDAGCV AAGIVIGASA WYCVYKYARG RNHMMKKRLA KPKTRAVAET bmy_10092T0/1-619 MSRVRDAGCV AAGIVIGASA WYCVYKYARG RNQ-MKKRLA KPKTRAVAGT BACU009088/1-619 MSRVRDAGCV AAGIVIGASA WYCVYKYARG RNQ-MKKRLA KPKTRAVAGT 51 100 ENSP00000331662/1-632 GARARAGLRA GFTIDLGSGF SPPTPVRAEA EDRAQDEASA LDTVGAEAVA ENSTTRP00000010142/1-619 GARARAGLRA GFTIDLGPGF GPPTPVHTGA EV-VQDE-SA LDMAGAEAVA ENSBTAP00000025866/1-609 GARARAGLRA GFTIDLGPGF SPPTPVRTGA EERAQDESSA LDTAGVEAVV bmy_10092T0/1-619 GARARAGLRA GFTIDLGPGF GPPTPVRTGA EVRVQDETSA LDMAGAEAVA BACU009088/1-619 GARARAGLRA GFTIDLGPGF GPPTPVRTGA EVRVQDGTSA LDMAGAEAVA 101 150 ENSP00000331662/1-632 PAASSAEAQS GAGSQAQEAD GAGVGPKAES VVGAAMASAI APPPGVTEAL ENSTTRP00000010142/1-619 PAASSXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000025866/1-609 PAASSAETQS GAGNKGQETE GAWVGLKAES V--ATVAFAV APPLWEAKAP bmy_10092T0/1-619 PAASSAEAQS GAGSQAQEAE GAGVGPKAES E--ATVASAV APPPWEAEAP BACU009088/1-619 PAASSAEAQS GAGSRAQEAE GAGVGPKAES E--ATVASAV APPPWEAEAP 151 200 ENSP00000331662/1-632 GAAEAPAMAG APKVAEAPRE AETSRAAVPP GT-VVPTEAA APTEVTEGPG ENSTTRP00000010142/1-619 XXXXXXXXXX APKLAEAPGT AEAPGA---- ---PAPTEAA PPTEAVEASI ENSBTAP00000025866/1-609 LAAKAPTMVG APKLAEAPGA AEAPRAPVVP HVVPVPTEAS QPTEPVEASI bmy_10092T0/1-619 VAAETSTMTG APKLAEAPGT AESPGA---- ---PAPTEAA PPTEAVEAPI BACU009088/1-619 VAAETSTMTA APKLAEAPGT AESPGA---- ---PAPTEAA PPTEAVEAPM 201 250 ENSP00000331662/1-632 VAAPTKVAEA PGVASPTEAA EAPVPATPTG AAAPTGAAES PGTSGSPRTA ENSTTRP00000010142/1-619 PATPTVVAAL SGATASSGAA APSGAAVPSG AAAPTGAAEA PGTSGSSKTA ENSBTAP00000025866/1-609 PAMPT----- ---------- ---GAAATLG VAAPSGTAEA PGPSGSSRTA bmy_10092T0/1-619 PATPTEVAAL SGATASSGAA APSGAAVPSG AAAPTGAAEA PGTSGSSRAA BACU009088/1-619 PATPTEVAAL SGATASSGAA APSGAAVPSG AAAPPGAAEA PGTSGSSRTA 251 300 ENSP00000331662/1-632 VVPGTSAAKK ATPGAHTGAI PKATSATGAV PKGGGKGVTR SRNGGKGKGK ENSTTRP00000010142/1-619 -----AAAKK TTPGAHTGAI PKAGSATGAV PKGGAKGGTK SRTGGKGKGK ENSBTAP00000025866/1-609 -----AATKK ATPGAHTGAI PKAGSATGAV PKGGAKGVTR SRTGGKGKGK bmy_10092T0/1-619 -----AAAKK TTPGAHTGAI PKAGSATGAV PKGGAKGGTK SRTGGKGKGK BACU009088/1-619 -----AAAKK TTPGAHTGAI PKAGSATGAV PKGGAKGGTK SRTGGKGKGK 301 350 ENSP00000331662/1-632 KSKVEVDELG MGFRPGDGAA AAAAASANGG QAFLAEVPDS EEGESGWTDT ENSTTRP00000010142/1-619 KNKVEVDELG LGFRPGDGAA AAAAASANGG QAFLAEVPDS EEGESGWTDT ENSBTAP00000025866/1-609 KNKVEVDELG LGFRPGDGAA AAAAASANGG QAFLAEVPDS EEGESGWTDT bmy_10092T0/1-619 KNKVEVDELG LGFRPGDGAA AAAAASANGG QAFLAEVPDS EEGESGWTDT BACU009088/1-619 KNKVEVDELG LGFRPGDGAA AAAAASANGG QAFLAEVPDS EEGESGWTDT 351 400 ENSP00000331662/1-632 ESDSDSEPET QRRGRGRRPV AMQKRPFPYE IDEILGVRDL RKVLALLQKS ENSTTRP00000010142/1-619 ESESDSEPET QQRGRGKRPV PMQKRPFPYE IDEILGVRDL RKVLALLQKS ENSBTAP00000025866/1-609 ESESDSEPET QQKGKGRRPV PMQKRPFPYE IDEILGVRDL RKVLALLQKS bmy_10092T0/1-619 ESESDSEPET QQRGRGRRPI PMQKRPFPYE IDEILGVRDL RKVLALLQKS BACU009088/1-619 ESESDSEPET QQRGRGRRPV PMQKRPFPYE IDEILGVRDL RKVLALLQKS 401 450 ENSP00000331662/1-632 DDPFIQQVAL LTLSNNANYS CNQETIRKLG GLPIIANMIN KTDPHIKEKA ENSTTRP00000010142/1-619 DDPFIQQVAL LTLSNNANYS CNQDTIRKLG GLPIIANMIN KTDPHIKEKA ENSBTAP00000025866/1-609 DDPFIQQVAL LTLSNNANYS CNQDTIRKLG GLPIIANMIN KTDPHIKEKA bmy_10092T0/1-619 DDPFIQQVAL LTLSNNANYS CNQDTIRKLG GLPIIANMIN KTDPHIKEKA BACU009088/1-619 DDPFIQQVAL LTLSNNANYS CNQDTIRKLG GLPIIANMIN KTDPHIKEKA 451 500 ENSP00000331662/1-632 LMAMNNLSEN YENQGRLQVY MNKVMDDIMA SNLNSAVQVV GLKFLTNMTI ENSTTRP00000010142/1-619 LMAMNNLSEN YENQGRLQVY MNKVMDDIMA SNLNSAVQVV GLKFLTNMTI ENSBTAP00000025866/1-609 LMAMNNLSEN YENQGRLQVY MNKVMDDIMA SNLNSAVQVV GLKFLTNMTI bmy_10092T0/1-619 LMAMNNLSEN YENQGRLQVY MNKVMDDIMA SNLNSAVQVV GLKFLTNMTI BACU009088/1-619 LMAMNNLSEN YENQGRLQVY MNKVMDDIMA SNLNSAVQVV GLKFLTNMTI 501 550 ENSP00000331662/1-632 TNDYQHLLVN SIANFFRLLS QGGGKIKVEI LKILSNFAEN PDMLKKLLST ENSTTRP00000010142/1-619 TNDYQHLLVN SIANFFRLLS QGGGKIKVEI LKILSNFAEN PDMLKKLLST ENSBTAP00000025866/1-609 TNDYQHLLVN SIANFFRLLS QGGGKIKVEI LKILSNFAEN PDMLKKLLST bmy_10092T0/1-619 TNDYQHLLVN SIANFFRLLS QGGGKIKVEI LKILSNFAEN PDMLKKLLST BACU009088/1-619 TNDYQHLLVN SIANFFRLLS QGGGKIKVEI LKILSNFAEN PDMLKKLLST 551 600 ENSP00000331662/1-632 QVPASFSSLY NSYVESEILI NALTLFEIIY DNLRAEVFNY REFNKGSLFY ENSTTRP00000010142/1-619 QVPSSFSSLY NSYVESEILI NALTLFEIIY DNLRAEVFNY REFNKGSLFY ENSBTAP00000025866/1-609 QVPSSFSSLY NSYVESEILI NALTLFEIIY DNLRAEVFNY REFNKGSLFY bmy_10092T0/1-619 QVPSSFSSLY NSYVESEILI NALTLFEIIY DNLRAEVFNY REFNKGSLFY BACU009088/1-619 QVPSSFSSLY NSYVESEILI NALTLFEIIY DNLRAEVFNY REFNKGSLFY 601 650 ENSP00000331662/1-632 LCTTSGVCVK KIRALANHHD LLVKVKVIKL VNKF ENSTTRP00000010142/1-619 LCTTSGVCVK KIRALADHHD LLVKVKVIKL VDKF ENSBTAP00000025866/1-609 LCTASGVCVK KIRALADHHD LLVKVKVIKL VDKF bmy_10092T0/1-619 LCTTSGVCVK KIRALADHHD LLVKVKVIKL VDKF BACU009088/1-619 LCTTSGVCVK KIRALADHHD LLVKVKVIKL VDKF