KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:32 2014 Check: 00 .. Name: ENSP00000415283/1-275 Len: 295 Check: 8422 Weight: 1.00 Name: ENSBTAP00000025884/1-259 Len: 295 Check: 5689 Weight: 1.00 Name: ENSTTRP00000006623/1-275 Len: 295 Check: 1877 Weight: 1.00 Name: bmy_06543T0/1-289 Len: 295 Check: 7291 Weight: 1.00 Name: BACU019255/1-275 Len: 295 Check: 4517 Weight: 1.00 // 1 50 ENSP00000415283/1-275 ---------- -------MSS FGYRTLTVAL FTLICCPGSD EKVFEVHVRP ENSBTAP00000025884/1-259 ---------- ---------- ---------- --MLCCQGSG EKAFE---GP ENSTTRP00000006623/1-275 ---------- -------MSP FGGWGLLSAF LALLCCTGSG EEAFEVRTWP bmy_06543T0/1-289 MTGGSRLFPV SPWTPLEMSP FGGWGLLSAF LALLCCTGSG EEAFEVRMWP BACU019255/1-275 ---------- -------MSP FGGWGLLSAF LALLCCTGSG EEAFEVRMWP 51 100 ENSP00000415283/1-275 KKLAVEPKGS LEVNCSTTCN QPEVGGLETS LDKILLDEQA QWKHYLVSNI ENSBTAP00000025884/1-259 EHLMVGSGEF QMINCTASCT DPTNLILETA LNKTLLESQA QWKLFQVYNI ENSTTRP00000006623/1-275 EQLMVESGES QVINCSTTCT QPNTGGLETT LHKTLLAEQD QWKLYEVFNI bmy_06543T0/1-289 EQLMVESGES QVINCSTTCT QPNAGGLETT LHKTLLDEQA QWKLYEVFNI BACU019255/1-275 EQLMVESGES QVINCSTTCT QPNAGGLETT LHKTLLEEQA QWKLYEVFNI 101 150 ENSP00000415283/1-275 SHDTVLQCHF TCSGKQESMN SNVSVYQPPR QVILTLQPTL VAVGKSFTIE ENSBTAP00000025884/1-259 SKDEELLCSF TCAGKQEMKV FNITVFYPPK QVLLTLSHTS VAVGTLFTIE ENSTTRP00000006623/1-275 SQDTDVICHF TCSGKQESKS LNISVFHPPK QVLLKLWPTL VAVGRSFTIQ bmy_06543T0/1-289 SQDTDVICHF TCSGKQESRS LNIN---PPK QVLLKLWPTL VAVGRSFTIQ BACU019255/1-275 SQDTDVICHF TCSGKQESRS LNVSVFYPPK QVLLKLWPTL VAVGKSFTIQ 151 200 ENSP00000415283/1-275 CRVPTVEPLD SLTLFLFRGN ETLHYETFGK AAPAPQEATA TFNSTADRED ENSBTAP00000025884/1-259 CRVPAVAPLE GLTVTLLRGT EILHNQTFEE TAPFPHDAVV THHTTAHRED ENSTTRP00000006623/1-275 CRVPSVAPLE GLTVTLLHGS EIVYSQTFVG TTLSPQEAMV THNTTAHRED bmy_06543T0/1-289 CRVPSVAPLE GLTVTLLRGS EIVYSQTFVG TTLSPQEAMV THNTTAHRED BACU019255/1-275 CRVPSVAPLE GLTVTLLRGS EIVYNQTFVG TTLSPQEAMV THNTTAHRED 201 250 ENSP00000415283/1-275 GHRNFSCLAV LDLMSRGGNI FHKHSAPKML EIYEPVSDSQ MVIIVTVVSV ENSBTAP00000025884/1-259 GHHNFSCEAQ MDLRSRGGGL VHRVSDPQRL EVKEPEPNYQ MV-IMAIVIV ENSTTRP00000006623/1-275 NRHNFSCRAE MDLRSRGGDL IHRVSDPQAL DVYEPAQDNQ VVAIITVVSV bmy_06543T0/1-289 DRHNFSCRAE MDLRSRGGEL VHSVSDPQAL DVYEPAQDNQ MVIIITVVSV BACU019255/1-275 DRHNFSCRAE MDLRSRGGDL VHSVSDPQAL DVYEPAQDSQ TVIIITVVSV 251 300 ENSP00000415283/1-275 LLSLFVTSVL LCFIFGQHLR QQRMGTYGVR AAWRRLPQAF RP--- ENSBTAP00000025884/1-259 LLLLFVTFVF LCFVFSEKWR RGRTGHYPVQ AAWNRLRRSH RAQPL ENSTTRP00000006623/1-275 LLFLFVTSVL LCFVFGQQWH QRRTGTYGVQ AAWRRLRWAY RA--- bmy_06543T0/1-289 LLFLFVTSVL LCFVFGQQWH QRRTGTYGVQ AAWRRLRWAY RA--- BACU019255/1-275 LLFLFVTSVL LCFVFGQQWH QRRTGTYGVQ AAWRRLRWAY RA---