KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:27:33 2014 Check: 00 .. Name: ENSBTAP00000025891/1-898 Len: 901 Check: 311 Weight: 1.00 Name: ENSTTRP00000004626/1-897 Len: 901 Check: 5086 Weight: 1.00 Name: bmy_02905T0/1-877 Len: 901 Check: 6422 Weight: 1.00 Name: BACU013957/1-856 Len: 901 Check: 8199 Weight: 1.00 // 1 50 ENSBTAP00000025891/1-898 --MEKHYSRL AVDSSYPDLV INVGKVTLGE SNRKKLQKVQ REKEKVKVIQ ENSTTRP00000004626/1-897 --MEEHNSSL VVESSYPDLV INVGKVTLGE RNRKKLQKIQ REQEKAKVIK bmy_02905T0/1-877 MNMEEHNSSL VVESSYPDLV INVGKVTLGE RNRKELQKIQ RXQEKAKVIK BACU013957/1-856 MNMEEHNSSL VVESSYPDLV INVGKVTLGE RNRKKLQKIQ REQEKAKVIK 51 100 ENSBTAP00000025891/1-898 AACALLNSGG GVIQLEMANN DDNLVEMGLD LEEALRTLIL FSNLQAFFET ENSTTRP00000004626/1-897 AACALLNSGG GVIQLEMTNN DEHPVEMGQD LEESLRTLIL SSNLQDFFKT bmy_02905T0/1-877 AACALLNSGG GVIQLEMANN NEHPVEMGLD LEESLRTLIL SSNLQAFFKT BACU013957/1-856 AACALLNSGG GVIQLEMANN DEHPVEMGLD LEESLRTLIL SSNLQAFFKT 101 150 ENSBTAP00000025891/1-898 KQQGSCYYIF VKSWSSDTLL ENVFVKPRIC SLSSSLYCRS GTSVYLMDSR ENSTTRP00000004626/1-897 KQQGRCYYIF VKSWSSDTFP EDSSFKPRIC SLNSSLYRRS GTSVHLMNSR bmy_02905T0/1-877 KQQGRCYYIF VKSWSSDTFP EDSSFKPRIC SLSSSLHCRS GTSVLPMDSR BACU013957/1-856 KQQGRCYYIF VKSWSSDTFP EDSSFKPRIC SLSSSLYCRS GTSVLPMDSR 151 200 ENSBTAP00000025891/1-898 KAFHFLKTKK TNAKSSGKEP VGEISKVIHP DLHDVDPTYC VFQKDHFERG ENSTTRP00000004626/1-897 EAFKFLKTKK INAKVLGKEP FGKVVKVITQ DLHNSDPTYL VFQKDQLEYG bmy_02905T0/1-877 EAFSFLKTKK INAQILGKEP FGKVVKVIHQ DLHNLDPTYL VFQKDQLEYG BACU013957/1-856 EAFRFLKTKK INAKILGKKP FGKVVKVIRQ DLHNSDPTYL VFQKDQLEYG 201 250 ENSBTAP00000025891/1-898 EVMPFPESQL IEFKQFATKH IEQYMKDTIL EYIPAFANTE GGYLVIGVDD ENSTTRP00000004626/1-897 EIMPFPESEF IEFKQFSTKR ILEYVKNIIP VYITAFANTE GGYLCIGVDD bmy_02905T0/1-877 EIVPFPESQF IEFKQFSTKH IQEYVKSIIP VYIPAFANTE GGYLCIGVDD BACU013957/1-856 EIVPFPESQF IEFKQFSTKH IQEYVKNIIP LYIPAFANTE GGYLCIGVDD 251 300 ENSBTAP00000025891/1-898 KSREVLGCAK ENVDRDSLKK KIEETIQKLS CVHFCQSRCQ IDFTVKILDV ENSTTRP00000004626/1-897 RSKKVLGCAK EKVDRDSLKK KIENTIYKLP CVHFCQSQCQ IDFTVKILDV bmy_02905T0/1-877 KSKKVLGCAK EKVDRDSLKK KIENTIYKLP CVHFCQSQCQ IDFTVKILDV BACU013957/1-856 RSKKVVGCAK EKVDRDSLKK KIENTIYKLP CVHFCQSQCQ IDFTVKILDV 301 350 ENSBTAP00000025891/1-898 LAEGELYGYA CVIGVKRFCG AVFSGVPSSW MVNGKDVCSL TTKEWLSMMM ENSTTRP00000004626/1-897 LAGGELYGYA CVIGVKPFCG ALFSETPCSW MVKDKHICKL TTQEWVGMVM bmy_02905T0/1-877 LAEGELYGYA CVIGVKPFCG ALFSEAPRSW MVKDKDICKL TTQEWVGMVM BACU013957/1-856 LAEGELYGYA CVIGVKPFCG ALFSEAPCSW MVKDKDICKL ATQEWVGMVM 351 400 ENSBTAP00000025891/1-898 DTDPDLTQLC KDFESQLSLS NSPPQSRPVY SKKGLEHKKD LQQLLFPDLV ENSTTRP00000004626/1-897 DTDPDFTWLC KDFESQLSLS SGPPLSRPVY SKKGLEHKKD LQQLLFP--V bmy_02905T0/1-877 DTDPDFTWLC KDFESQLSLS SGPPLSRPVY SKKGLEHKKD LQRLLFP--V BACU013957/1-856 DTDP------ ---------- ---------- ---------- ---------V 401 450 ENSBTAP00000025891/1-898 TPGCLKYTPE SLQKELFSQN EGLEELINRQ IDPSSQGILI LSTSWAVDLN ENSTTRP00000004626/1-897 LPGRLQCTPK SLWKELCSQN EGLEELINMQ IYPFSQGILI LSRSWAVDLN bmy_02905T0/1-877 LPGCLKYTPK SLWKELSSQN EGLEELINMQ IYPFSQGILI LSRSWAVDLN BACU013957/1-856 LPGHLKYIPE SLWKELSSQN EGLEELINRQ IRSFSQGILI LSRSWAVDLN 451 500 ENSBTAP00000025891/1-898 LEEKQGVICD ALLIAQNRPP ILYTILRGQD AEGQSYCTHT AFTLKQKLVN ENSTTRP00000004626/1-897 LKEKQAVICD ALLIAWNSPP ILYTILREQD ADEQSYCTST AFTLKQKLVN bmy_02905T0/1-877 LQEKQAVICD ALLIAWNSPP ILYTILREQD ADEQSYCTST AFTXKQKLVN BACU013957/1-856 LEEKQAVICD ALLIAWDSPP ILYTILREQD ADEQSYCTST AFTLKQKLVN 501 550 ENSBTAP00000025891/1-898 TGGYTENLCI TTKVLHLNPE GGAQSSAGSG SVIDYPSSYH LADTQQMEVL ENSTTRP00000004626/1-897 LGGYSGNVCV ITKVLHLSPE SNAESSEGAA SLIDYPRSYY IANTQQMEAL bmy_02905T0/1-877 MGGYSGNLCV ITKVLHLSPK SNAESSGGAA SLIDYPRSYY FANTQQMEAL BACU013957/1-856 MGGYSGNLCV ISKVLHLRPE SNAESSEGAA SPIDYPRSYY FANTQQMEAL 551 600 ENSBTAP00000025891/1-898 LQSLVIVLLG FRSLLSDKLG CEVLNLLTAK QYKIFSKNLR KSKELFIHGL ENSTTRP00000004626/1-897 LQSLVIVLLA FRSFLSDQLG CEVLNLLTAK QYEIFSKNLR KNKELFIHGL bmy_02905T0/1-877 LQSLVIVLLG FRSFLSDQLG CEVLNLLTAK QYEIFSKNLR KNKELFIHGL BACU013957/1-856 LQSLVIVLLG FRSFLSDQLG CEVLNLLTAK QYEIFSKNLR KNKELFIHGL 601 650 ENSBTAP00000025891/1-898 PGSGKTIMAI KIMEKIRNTF HCETQEILYI CENKPLKNFI RGKNICQAVT ENSTTRP00000004626/1-897 PGSGKTIMAM KIMEKIRNMF HCEANEILYI CENEPLRKFI SDKKICQAVT bmy_02905T0/1-877 PGSGKTIMAV KIMEKIRNI- ---------- ---------- -DKKICHAVT BACU013957/1-856 PGSGKTIIAV KIMEKIRNMF HCEANEILYI CENQPLRKFI SDKKICHAVT 651 700 ENSBTAP00000025891/1-898 RKSFMKYNFE YIQHIIIDEA QNFRTEDGEW YRKAKTITQR DVDCPRILWI ENSTTRP00000004626/1-897 RKSFMKNDFK KIQHIIIDEA QNFRSEDGDW YGKAKTITQR DRDCPGILWI bmy_02905T0/1-877 RKTFMKNDFQ KIQHIIIDEA QNFRSEDGDW YGKAKTITQR DKDCPGILWI BACU013957/1-856 RKTFMKDDFQ KIQHIIIDEA QNFRSEDGDW YGKAKTITQR DKDCPGILWI 701 750 ENSBTAP00000025891/1-898 FLDYFQTSHM ECIGLPALSA QYPREELTRV VRNAGQIAGY LRRVLQKVRK ENSTTRP00000004626/1-897 FLDYFQTNHV ECSGLPALSA QFPREELTRV VRNAYQITEY LQRVLQEVRK bmy_02905T0/1-877 FLDYFQTNHV ECSGLPALSA QYPREELTRV VRNAYQIAEY LQRVLQEVRK BACU013957/1-856 FLDYFQTNHV ECSGLPALSA QYPREELTRV VRNAHQIAEY LQSVLQKVRK 751 800 ENSBTAP00000025891/1-898 NPPCNIPHEP LKMCLKAEWA QDVQGTLHIK KNLTLNAIVT HVADTCKLLF ENSTTRP00000004626/1-897 NPPPNIPLGS LQMLLEAEWA QVVEGTLNIE ENLPLNKIAT YVADTCKLLF bmy_02905T0/1-877 NPPPNIPLGS LQMLLEADWA QGVQGTLTLK ENLTLNEIVT HVADTCKVLF BACU013957/1-856 NPPPNIPLGS LQMLLEADWA QGVQGTLNIQ ENLTLNTIVT QVADTCKLLF 801 850 ENSBTAP00000025891/1-898 ERGYSPKDVA VLVSTAKDVE KYQQKLLQAM RKKRIVYLTD ASDLGGDHMV ENSTTRP00000004626/1-897 ERGYSPKDIA VLVSTARDVE RYKTELLRAM RKIKVVHFTN ASNMSGDYIV bmy_02905T0/1-877 ERGYSPKDVA VLVSTRKDVE WYKQKLLRAM RKIKVVRFTD ASDMSGDRIV BACU013957/1-856 ERGYSPKDVA VLVSTTKDVE RYKQELLRAM RKIRVVRFTD ASDMSGDHIV 851 900 ENSBTAP00000025891/1-898 LDSVRRFSGL ERSIVFGIHP STMEPAILYN ILVCLASRAN QQLHILWQRD ENSTTRP00000004626/1-897 LDSVRRFSGL ERNIVFGIHP KTVEPAILYN ILVCLASRAN QQLHILWHRD bmy_02905T0/1-877 LDSVRRFSGL ERNIVFGIHP KTVEPAILHN ILVCLASRAN QQLRILWLRD BACU013957/1-856 LDSVRRFSGL ERNIVFGIHP KTVEPAILHN ILVCLASRAN QQLHILWLCD 901 950 ENSBTAP00000025891/1-898 - ENSTTRP00000004626/1-897 V bmy_02905T0/1-877 V BACU013957/1-856 V