KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:27:34 2014 Check: 00 .. Name: ENSP00000386604/1-590 Len: 590 Check: 7535 Weight: 1.00 Name: ENSBTAP00000025898/1-584 Len: 590 Check: 6780 Weight: 1.00 Name: bmy_12315T0/1-546 Len: 590 Check: 3938 Weight: 1.00 Name: BACU003761/1-338 Len: 590 Check: 6008 Weight: 1.00 // 1 50 ENSP00000386604/1-590 MEVIHGRPYC CRELEGADIL SNTFYSNELH NPLQTVTRPT ASEDRYQELR ENSBTAP00000025898/1-584 MEVIHGQPYC CRELEGADIL SDTFYSNELH TPLETATRPT ASEDRYQKFR bmy_12315T0/1-546 MEVIHGRLYC CRELKGADIP SDTFYSNELH TPLQTAAXPT ASED------ BACU003761/1-338 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000386604/1-590 ESLQQCRLPW GAEREYGGII PISLPEDHRP KYEPPRVMGK GHQHYGFGGE ENSBTAP00000025898/1-584 QSLQRCRLPW GAEREYGGMI PISLPEEHRP KCEPPRVMGK GHQHYGFGGE bmy_12315T0/1-546 ------RLPW GAEREYGGII PVSLPEEHRP KCEPPHVMGK GHQRYGFGGE BACU003761/1-338 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000386604/1-590 TWPRKLPVEQ FYYLTQNKKS DVYGNDSLIP KPPNSTVGEI CLPYPIEHPY ENSBTAP00000025898/1-584 IWPRKLPIEQ FYYLSQNKKS DIYGNDSLLP KPPNSTVGEI CSPYPIEHPY bmy_12315T0/1-546 TWPRKLPLEQ FYYLSQNKKS DVYGNDSF-- ---------- ---------- BACU003761/1-338 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000386604/1-590 HTHICRGAMF PTFTSPEDLY TGIKARTQQP FPPTVPTKAY DSTVLKTRGN ENSBTAP00000025898/1-584 HTHISRGAMF PTFTSPKDLY TGIKARTQQP FPPTVPTKPY DTTVLKTRGN bmy_12315T0/1-546 ----SSGATF PMSPSPEGLY TGVKAQSQQP LPPTVPARPY GAAVLKARGN BACU003761/1-338 --------MF PMSPSPEGLY TGVKAQSQQP LPPTVPARPY GAAVLKTR-- 201 250 ENSP00000386604/1-590 PYRYELIDIP MDSKKKALTW PGQGVYYDFP RGVEKNKPVF YPKPPKTFAP ENSBTAP00000025898/1-584 PYRYELLDFP MDSKKKALVW PGQRVYFDLP KCVEKNKPVF YPKPPKTFAP bmy_12315T0/1-546 PYRYELLDFP MDSKKKALVW PGQGVYYDLP KCVEKNKPVF YPKPPKTFAP BACU003761/1-338 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000386604/1-590 NTSLNSWDPI CSAKEANIQR NLERSHWLTS YTHDFTGLGP MDPLELDDYH ENSBTAP00000025898/1-584 NTSLNSWDPI TSLKEVNIQR NLEKSHWITS YNHDFTGLGP MNPLELDDYH bmy_12315T0/1-546 TTSLNSWDPI NSLKEANIQR NLERSHWITS YNHDFTGLGP MNPLELDDYH BACU003761/1-338 ---------- ---------- ---------- ------GLGP MNPLELDDYH 301 350 ENSP00000386604/1-590 EKMVAELTRK IGFDPEPQEK FHPVFKPPRP LEGRIARLIQ NRRSLEAIVQ ENSBTAP00000025898/1-584 EKEVAELTGQ IGFDPEPQEK VHPALKPTRP LEGRIARLIQ NQRPLEAILE bmy_12315T0/1-546 EKEVAELTGQ IGFDPEPQEK FHPALKPTRP LEGRIARLIQ NRRPLEAIVQ BACU003761/1-338 EKEVAELTGQ IGFDPEPQEK FHPALKPTRP LEGRIARLIQ NPRPLEAIVQ 351 400 ENSP00000386604/1-590 QRPRSCPDCT PRVLCNFHTF VPSSKEMVAL SDNIPAGVTH KNQDIEEKII ENSBTAP00000025898/1-584 QRPSSCPDCT PRVLCTFHTF VPSSTEMMAL SDNIPADVTH KNQEIEEKIK bmy_12315T0/1-546 QRPPSCPDCT PRVLCAFHTF VSSSTEMMAL SDNIPAGVTH KNQEIEDKIK BACU003761/1-338 QRPPSCPDCT PRVLCAFHTF VSSSTEMMAL SDNIPAGVTH KNQEIEDKIK 401 450 ENSP00000386604/1-590 EEQSLLSTYE LPSCYPTKDL TSIYDIKPFP KITDTKKTED LYWRQQSLKT ENSBTAP00000025898/1-584 EEQSLLSTYA LPSCYPTKDL ANTYDIKPFP KITDTKKTED LYWRQLSLKP bmy_12315T0/1-546 EEQSLLSTYA LPSCYPTKDL ANTYDIKPFP KITDTEKTED LYWRQLSLKP BACU003761/1-338 EEQSLLSTYA LPSCYPTKDL ANTYDIKPFP KITDTEKTED LYWRQLSLKP 451 500 ENSP00000386604/1-590 QPTPYCKPDH WIHYENLKSP LRDQYNMCPD PVSLSKPSVL QNKQDTEAFT ENSBTAP00000025898/1-584 QLIPYCNPDH YIPYEHL--- --NQYNVYQN PVSLSKPGIL QSKPDLKTFD bmy_12315T0/1-546 QPIPYCNPDH YIPYEHL--- --NQYNMCQN PVSLSKPSIL QNKPDSEASD BACU003761/1-338 QPIPYCNPDH YIPYEHL--- --NQYNMCQN PISLSKPSIL QNKPDSGASD 501 550 ENSP00000386604/1-590 LEHFLSKPEE ELFLNMENNE ETRPVLGWIP RAGVTKPQTN LLELKNSFSK ENSBTAP00000025898/1-584 FEHFLSKP-E QLTLNMEDDE ETKPILGWIP RAGVAKPQTD LLELKNAFSK bmy_12315T0/1-546 LEHFLSKP-E RLTLNMENGE ETRPILCWIP RAGVAKPQTD LLELRNTFSK BACU003761/1-338 LEHFLSKP-E RLTLNMENGE ETRPILCWIP RAGVAKPQTD LLELKNTLSK 551 600 ENSP00000386604/1-590 TGAQKRFHKS ILEDHKDLRD NEHSGMKHQF YGHNSYYFYN ENSBTAP00000025898/1-584 TGAQKRFHKS VLEDYKDLRD KEHLGKKHQF YGHNSYYFYN bmy_12315T0/1-546 TGAQKYFHKS ILEDYKDLRD KEHSGKKHQF YGHNSYYFYN BACU003761/1-338 TGAQKCFHKS ILEDYKDLRD KEHSGKKHQF YGHNSYYFYN