KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:36 2014 Check: 00 .. Name: ENSP00000295304/1-184 Len: 227 Check: 8285 Weight: 1.00 Name: ENSBTAP00000025922/1-176 Len: 227 Check: 3400 Weight: 1.00 Name: ENSTTRP00000006912/1-140 Len: 227 Check: 1825 Weight: 1.00 Name: bmy_12132T0/1-227 Len: 227 Check: 3311 Weight: 1.00 Name: BACU013872/1-176 Len: 227 Check: 2430 Weight: 1.00 // 1 50 ENSP00000295304/1-184 ---------- ---------- ---------- ---------M WVFGYGSLIW ENSBTAP00000025922/1-176 ---------- ---------- ---------- ---------M WVFGYGSLIW ENSTTRP00000006912/1-140 ---------- ---------- ---------- ---------- ---------- bmy_12132T0/1-227 VSCVRKAVVP ACSSETTPRG QPPPLQLLLP PPRRKSKGRM WVFGYGSLIW BACU013872/1-176 ---------- ---------- ---------- ---------M WVFGYGSLIW 51 100 ENSP00000295304/1-184 KVDFPYQDKL VGYITNYSRR FWQGSTDHRG VPGKPGRVVT LVEDPAGCVW ENSBTAP00000025922/1-176 KVDFPYQDKL VGYISGYSRR FWQGSTDHRG VPGK------ ------GSVW ENSTTRP00000006912/1-140 ---------- ---------- ---------- -PGR---VVT LVEDPAGCVW bmy_12132T0/1-227 KVDFPYQDKV VGYISGYSRR FWQGSIDHRG VPGKPGRVVT LVEDPAGCVW BACU013872/1-176 KVDFPYQDKV VGYISGYSRR FWQGSIDHRG VPGK------ ------GCVW 101 150 ENSP00000295304/1-184 GVAYRLPVGK EEEVKAYLDF REKGGYRTTT VIFYPKDPTT KPFSVLLYIG ENSBTAP00000025922/1-176 GVAYKLPVGK EEEVKAYLDF REKGGYRTTT VIFYPKDSTT EPFSVLLYIG ENSTTRP00000006912/1-140 GVAYKLPVGK EEEVKAYLDF REKGGYRTTT VNFYPKDSTT EPFTVLLYIG bmy_12132T0/1-227 GVAYRLPVGK EEEVKAYLDF REKGGYRTTT VIFYPKDSTT EPFTVLLYIG BACU013872/1-176 GVAYRLPVGK EEEVKAYLDF REKGGYRTTT VIFYPKDSTT EPFTVLLYIG 151 200 ENSP00000295304/1-184 TCDNPDYLGP APLEDIAEQI FNAAGPSGRN TEYLFELANS IRNLVPEEAD ENSBTAP00000025922/1-176 TRDNPNYLGP APLEDIAEQI FNAAGPSGKN TEYLFELANS MRSLVPEDAD ENSTTRP00000006912/1-140 TCDNPNYLGP APLEDIAEQI FNAAGPSGKN TEYLFELANS IRSLVPEDAD bmy_12132T0/1-227 TCDNPNYLGP APLEDIAEQI FNAAGPSGKN TEYLFELANS VRSLVPEDAD BACU013872/1-176 TCDNPNYLGP APLEDIAEQI FNAAGPSGKN TEYLFELANS VRSLVPEDAD 201 250 ENSP00000295304/1-184 EHLFALEKLV KERLEGKQNL NCI---- ENSBTAP00000025922/1-176 EHLFSLEKLV KERLEGKQNF NCIKRPN ENSTTRP00000006912/1-140 EHLFSLEKLV KERLEGKQNF NCLK--- bmy_12132T0/1-227 EHLFSLEKLV KERLEGKQNF NCLKRPN BACU013872/1-176 EHLFSLEKLV KERLEGKQNF NCLKRPN