KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:36 2014 Check: 00 .. Name: BACU014307/1-175 Len: 616 Check: 4867 Weight: 1.00 Name: ENSTTRP00000009319/1-610 Len: 616 Check: 5686 Weight: 1.00 Name: ENSP00000356940/1-613 Len: 616 Check: 2754 Weight: 1.00 Name: bmy_12930T0/1-393 Len: 616 Check: 2185 Weight: 1.00 Name: ENSBTAP00000025923/1-614 Len: 616 Check: 6274 Weight: 1.00 // 1 50 BACU014307/1-175 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009319/1-610 MCRWPLLLLC GLLPGAAAGG SGRPFPHRTL LDSEGKYWMR WGPRGSRLAF ENSP00000356940/1-613 MCCWPLLLLW GLLPGTAAGG SGRTYPHRTL LDSEGKYWLG WSQRGSQIAF bmy_12930T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025923/1-614 MCRWPLLLLW GLLPRAAAGG SGWPFPHRTL LDSEGKYWLS WGPRGGRLAF 51 100 BACU014307/1-175 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009319/1-610 RLEENTAGYV GLGF-PTXXX XXXXXXXXXX XXXXXXXXDY FTNANRELKK ENSP00000356940/1-613 RLQVRTAGYV GFGFSPTGAM ASADIVVGGV AHGRPYLQDY FTNANRELKK bmy_12930T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025923/1-614 RLEVRTAGYV GFGFSSTGAM AAADIVVGGV ARGRPYLQDY FTNANRELRK 101 150 BACU014307/1-175 ---------- -MENSTHTII EFTRELHTCD INDKSITEST VRVIWAYHHE ENSTTRP00000009319/1-610 DVQQDYHLEY AMENSTHTII EFTRELHTCD INDKSITXXX XXXXXXXXXX ENSP00000356940/1-613 DAQQDYHLEY AMENSTHTII EFTRELHTCD INDKSITDST VRVIWAYHHE bmy_12930T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025923/1-614 DAQQDYHLEY AMENSTHTVI EFTRELHTCD INDKSISEST VRVIWAYHHE 151 200 BACU014307/1-175 DVGEAGPKYH ESSRGTKSLR LLNPEKTNVL STAVPYFDLV NQNVPIPNKG ENSTTRP00000009319/1-610 XXXXXXXXXX XXXXGTKSLR LLNPEKTNVL STAVPYFDLV NQDVPIPNKG ENSP00000356940/1-613 DAGEAGPKYH DSNRGTKSLR LLNPEKTSVL STALPYFDLV NQDVPIPNKD bmy_12930T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025923/1-614 DVGEAGPKYH ESNRGTKSLR LLNPEKTSML STAIPYFDLV NQDVSIPNKG 201 250 BACU014307/1-175 TTYWCQMFKI PMLQEKHHVV K-NQCIDRGL HEQI------ ---------- ENSTTRP00000009319/1-610 TTYWCQMFKI PVLQEKHHVV KVKLVIQRG- HESLVHHILL YQCSSNFSDS ENSP00000356940/1-613 TTYWCQMFKI PVFQEKHHVI KVEPVIQRG- HESLVHHILL YQCSNNFNDS bmy_12930T0/1-393 ---------- ---------- -VKPVIQRG- HESLVHHILL YQCSSNFSDS ENSBTAP00000025923/1-614 TTYWCQMFKI PMLQEKHHVI KVEPVIQKG- HESLVHHILL YQCSSNFSDS 251 300 BACU014307/1-175 ---------- ---------- ---------- ---------- ------PLEP ENSTTRP00000009319/1-610 VL-HGYECYY PNMLDAFFTC ETVIFAWXXX XXGFSYPPHV GLSLGTPLDP ENSP00000356940/1-613 VLESGHECYH PNMPDAFLTC ETVIFAWAIG GEGFSYPPHV GLSLGTPLDP bmy_12930T0/1-393 VQDHGHECYH PNMPDAFLTC ETVIFAWAIG GEGFSYPPHV GLSLGTPLDP ENSBTAP00000025923/1-614 VLDDGHECYH PNMPDAFLTC ETVIFAWAIG GEGFSYPPHV GLSLGTPLDP 301 350 BACU014307/1-175 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009319/1-610 HYVLLEVHYD NPTYKEGLLD NSGLRLFHTT DIRKYDAGVI EAGLWVSLFH ENSP00000356940/1-613 HYVLLEVHYD NPTYEEGLID NSGLRLFYTM DIRKYDAGVI EAGLWVSLFH bmy_12930T0/1-393 HYVLLEVHYD NPTYKEGLID NSGLRLFHTT DIRKYDAGVI EAGLWVSLFH ENSBTAP00000025923/1-614 HYVLLEVHYD NPTYKEGLID NSGLRLFYTA DIRKYDAGVI EAGLWVSLFH 351 400 BACU014307/1-175 ---------- ---------- ---------- ---------- ----SRNVSI ENSTTRP00000009319/1-610 TIPPGLPDFR SEGHCTLECL EEALEVEKPS GIHVFAVLLH AHLAGRGIRL ENSP00000356940/1-613 TIPPGMPEFQ SEGHCTLECL EEALEAEKPS GIHVFAVLLH AHLAGRGIRL bmy_12930T0/1-393 TIPPGLPDFR SEGHCTLECL EEALEVEKPS GIHVFAVLLH AHLAGRGIRL ENSBTAP00000025923/1-614 TIPPGLPDFR SEGHCTLECL EEALEAEKPS GIHVFAVLLH AHLAGRGIRL 401 450 BACU014307/1-175 KILGTG---- ---------- ---------- ---------- ---------- ENSTTRP00000009319/1-610 RHFRKGEEMR LLAYDDDFDF NFQEFQYLKE ERTILPXXXX XXXXXXXXXX ENSP00000356940/1-613 RHFRKGKEMK LLAYDDDFDF NFQEFQYLKE EQTILPGDNL ITECRYNTKD bmy_12930T0/1-393 RHFRKGEEMR LLAYDDDFDF NFQEFQYLKE ERTILPGDNL ITECRYNTKD ENSBTAP00000025923/1-614 RHFRKGEEMR LLAYDDDFDF NFQEFQYLKE EQTILPGDNL ITECRYNTKD 451 500 BACU014307/1-175 ---------- ---------- ---------- ---------- LDLVG----- ENSTTRP00000009319/1-610 XXXXXXGGLS TRNEMCLSYL LYYPRINLTR CASIPDIMEQ LQFIGVKEIY ENSP00000356940/1-613 RAEMTWGGLS TRSEMCLSYL LYYPRINLTR CASIPDIMEQ LQFIGVKEIY bmy_12930T0/1-393 RSRMTWGGLS TRNEMCLSYL LYYPRINLTR CASIPDIMEQ LQFIGVKEIY ENSBTAP00000025923/1-614 RARMTWGGLS TRNEMCLSYL LYYPRINLTR CASIPDIMEQ LQFIGVKEIY 501 550 BACU014307/1-175 -----WHLST QRPTVF---- ---TLGDWK- ---------- ---------- ENSTTRP00000009319/1-610 RPVTTWPFII KSPKQYKNLS FMDAMNKFKW TKKEGLAFNK IVLNLPVNVR ENSP00000356940/1-613 RPVTTWPFII KSPKQYKNLS FMDAMNKFKW TKKEGLSFNK LVLSLPVNVR bmy_12930T0/1-393 RPVTTWPFII KSPKQYKNLS FMDAMNKFKW TKKEGLAFNK LVLSLPVNVR ENSBTAP00000025923/1-614 RPVTTWPFII KSPKQYRNLS FMDAMNKFKW TKKEGLAFNK LVLSLPVNVR 551 600 BACU014307/1-175 CSRTRDDTYK V--------- ---------- ---------- ---------- ENSTTRP00000009319/1-610 CSKTDNAEWS IQGMTALPPD IERPYKEEPL MCG-ASSTSL RGSVSLELLL ENSP00000356940/1-613 CSKTDNAEWS IQGMTALPPD IERPYKAEPL VCGTSSSSSL HRDFSINLLV bmy_12930T0/1-393 CSKTDNAEWS IQGMTALPPD IERPYKAEPL VCG-ASSTSL HGNVSLELLL ENSBTAP00000025923/1-614 CSKTDNAEWS IQGMTALPPD IERPYQAEPL VCG-ASSTSL RGNVCLELLL 601 650 BACU014307/1-175 SFVI------ ------ ENSTTRP00000009319/1-610 CFMVLGGTLS TASL-- ENSP00000356940/1-613 CLLLLSCTLS TKSL-- bmy_12930T0/1-393 CFMVLGGTLS TTSLCP ENSBTAP00000025923/1-614 SFVVLGSSLS TRSLWP