KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:37 2014 Check: 00 .. Name: ENSP00000252891/1-609 Len: 609 Check: 4060 Weight: 1.00 Name: ENSBTAP00000025925/1-594 Len: 609 Check: 1476 Weight: 1.00 Name: BACU001443/1-471 Len: 609 Check: 5146 Weight: 1.00 Name: bmy_11294T0/1-464 Len: 609 Check: 4834 Weight: 1.00 Name: ENSTTRP00000006789/1-581 Len: 609 Check: 7235 Weight: 1.00 // 1 50 ENSP00000252891/1-609 MSRSAAASGG PRRPERHLPP APCGAPGPPE TCRTEPDGAG TMNKLRQSLR ENSBTAP00000025925/1-594 MSRSAAARGG LRRPEQHLPP APCGALGPPE ISRTEPDGAG TMNKLRQSLR BACU001443/1-471 ---------- ---------- ---------- ---------- -MNKLRQSLR bmy_11294T0/1-464 MSRSAAASGG PRSPEQHLPP APCGALGPPE TSRTEPDGAG TMNKLRQSLR ENSTTRP00000006789/1-581 --------GG PRRPEQHLPP APCGALGPPE TSRTEPDGAG TMNKLRQSLR 51 100 ENSP00000252891/1-609 RRKPAYVPEA SRPHQWQADE DAVRKGTCSF PVRYLGHVEV EESRGMHVCE ENSBTAP00000025925/1-594 RRKPAYVPEA SRPHQWQADE DAVRKGTCSF PVRYLGHVEV EESRGMHVCE BACU001443/1-471 RRKPAYVPEA SRPHQWQADE DAVRKGTCSF PVRYLGHVEV EESRGMHVCE bmy_11294T0/1-464 RRKPAYVPEA SRPHQWQADE DAVRKGTCSF PVR------- ---------- ENSTTRP00000006789/1-581 RRKPAYVPEA SRPHQWQADE DAVRKGTCSF PVRYLGHVEV EESRGMHVCE 101 150 ENSP00000252891/1-609 DAVKKLKAMG RKSVKSVLWV SADGLRVVDD KTKDLLVDQT IEKVSFCAPD ENSBTAP00000025925/1-594 DAVKKLKAMG RKSVKSVLWV SADGLRVVDD KTKDLLVDQT IEKVSFCAPD BACU001443/1-471 DAVKKLKAMG RKSVKSVLWV SADGLRVVDD KTKDLLVDQT IEKVSFCAPD bmy_11294T0/1-464 --------MG RKSVKSVLWV SADGLRVVDD KTK------- ---------- ENSTTRP00000006789/1-581 DAVKKLKAMG RKSVKSVLWV SADGLRVVDD KTKDLLVDQT IEKVSFCAPD 151 200 ENSP00000252891/1-609 RNLDKAFSYI CRDGTTRRWI CHCFLALKDS GERLSHAVGC AFAACLERKQ ENSBTAP00000025925/1-594 RNLDKAFSYI CRDGTTRRWI CHCFLALKDS GERLSHAVGC AFAACLERKQ BACU001443/1-471 RNLDKAFSYI CRDGTTRRWI CHCFLALKDS ---------- ---------- bmy_11294T0/1-464 ---------- ---------- ---------- GERLSHAVGC AFAACLERKQ ENSTTRP00000006789/1-581 RNLDKAFSYI CRDGTTRRWI CHCFLALKDS GERLSHAVGC AFAACLERKQ 201 250 ENSP00000252891/1-609 RREKECGVTA AFDASRTSFA REGSFRLSGG GRPAEREAPD KKKAEAAAAP ENSBTAP00000025925/1-594 RREKECGVTA AFDASRTSFA REGSFRLSGG GRPAEREAQD KKK-EAAAAP BACU001443/1-471 ---------- ---------- ---------- ---------- ---------- bmy_11294T0/1-464 RREKECGVTA AFDASRTSFS REGSFRLSGG GRPAEREAAD KKKAEAAAAP ENSTTRP00000006789/1-581 RREKECGVTA AFDASRTSFA REGSFRLSGG GRPAEREAAD KKKAEAAAAP 251 300 ENSP00000252891/1-609 TVAPGPAQPG HVSPTPATTS PGEKGEAGTP VAAGTTAAAI PRRHAPLEQL ENSBTAP00000025925/1-594 TAAPGPAQPG HVSPTPATTS PGEKGEAGTP VPAGTTAAAI PRRHAPLEQL BACU001443/1-471 --------PG HVSPTPATTS PGEKGEAGTP VAAGTTAAAI PRRHAPLEQL bmy_11294T0/1-464 TAAPGPAQPG HVSPTPATTS PGEKGEAGTP VAAGTTAAAI PRRHAPLEQL ENSTTRP00000006789/1-581 SAAPGPAQPG HVSPTPATTS PGEKGEAGTP VAAGTTAAAI PRRHAPLEQL 301 350 ENSP00000252891/1-609 VRQGSFRGFP ALSQKNSPFK RQLSLRLNEL PSTLQRRTDF QVKGTVPEME ENSBTAP00000025925/1-594 VRQGSFRGFP ALSQKNSPFK RQLSLRLNEL PSTLQRRTDF QVKGTVPEME BACU001443/1-471 VRQGSFRGFP ALSQKNSPFK RQLSLRLNEL PSTLQRRTDF QVKGTVPEME bmy_11294T0/1-464 VRQGSFRGFP ALSQKNSPFK RQLSLRLNEL PSTLQRRTDF QVKGT----- ENSTTRP00000006789/1-581 VRQGSFRGFP ALSQKNSPFK RQLSLRLNEL PSTLQRRTDF QVKGTVPEME 351 400 ENSP00000252891/1-609 PPGAGDSDSI NALCTQISSS FASAGAPAPG PPPATTGTSA WGEPSVPPAA ENSBTAP00000025925/1-594 PPGASDSDSI SALCTQISSS FASAGAPASG PPPASTGTSA WGEPSVTPAA BACU001443/1-471 PPSASDSDSI SALCTQISSS FASAGAPAPG PPPASTGTSA WGEPSVPPAA bmy_11294T0/1-464 ---------- ---------- ---------- ---------- ---------A ENSTTRP00000006789/1-581 PPNASDSDSI SALCTQISSS FASAGAPAPG PPPASTGTSA WGEPPAPPAA 401 450 ENSP00000252891/1-609 AFQPGHKRTP SEAERWLEEV SQVAKAQQQQ QQQQQQQQQQ QQQQQQAASV ENSBTAP00000025925/1-594 AFQPGHKRTP SEAERWLEEV SQVAKAQQQQ QQQQQ----- ---------A BACU001443/1-471 AFQPGHKRTP SEAERWLEEV SQVAKAQQQQ ---------- ---------A bmy_11294T0/1-464 AFQPGHKRTP SEAERWLEEV SQVAKAQQQQ ---------- ---------A ENSTTRP00000006789/1-581 AFQPGHKRTP SEAERWLEEV SQVAKAQQQ- ---------- ---------A 451 500 ENSP00000252891/1-609 APVPTMPPAL QPFPAPVGPF DAAPAQVAVF LPPPHMQPPF VPAYPGLGYP ENSBTAP00000025925/1-594 APVPTVPPGL QPFPAPVGPF DATPAQVAVF LPAPHMQPPF VPAYPGLGYP BACU001443/1-471 ASVPAVPPGL QPFPAPVGPF DAAPAQVAVF LPPPHMQPPF VPAYPGLGYP bmy_11294T0/1-464 ASVPAVPPGL QPFPAPVGPF DAAPAQVAVF LPPPHMQPPF VPAYPGLGYP ENSTTRP00000006789/1-581 ASVPAVPPGL QPFPAPVGPF DAAPAQVAVF LPPPHMQPPF VPAYPGLGYP 501 550 ENSP00000252891/1-609 PMPRVPVVGI TPSQMVANAF CSAAQLQPQP ATLLGKAGAF PPPAIPSAPG ENSBTAP00000025925/1-594 PMPRVPVVGI TPSQMVANAF CSAAQLQPQP ATLLGKAGAF PPPAAPSAPG BACU001443/1-471 PMPRVPVVGI TPSQMVANAF CSAAQLQPQP ATLIGKAGAF PPPAAPSAPG bmy_11294T0/1-464 PMPRVPVVGI TPSQMVANAF CSAAQLQPQP AALIGKAGAF PPPAAPSAPG ENSTTRP00000006789/1-581 PMPRVPVVGI TPSQMVANAF CSAAQLQPQP ATLIGKAGAF PPPAAPSAPG 551 600 ENSP00000252891/1-609 SQARPRPNGA PWPPEPAPAP APELDPFEAQ WAALEGKATV EKPSNPFSGD ENSBTAP00000025925/1-594 GQARPRPNGA PWPPEPAPAP APELDPFEAQ WAALEGKPAV EKPSNPFSGD BACU001443/1-471 GQARPRPNGA PWPPEPAPAP APELDPFEAQ WAALEGKPAV EKPSNPFSGD bmy_11294T0/1-464 GQARPRPNGA PWPPEPAPAP APELDPFEAQ WAALEGKPAV EKPSNPFSGD ENSTTRP00000006789/1-581 GQARPRPNGA PWPPEPAPAP APELDPFEAQ WAALEGKPAV EKPSNPFSGD 601 650 ENSP00000252891/1-609 LQKTFEIEL ENSBTAP00000025925/1-594 LQKTFEIEL BACU001443/1-471 VQKTFEIEL bmy_11294T0/1-464 LQKTFEIEL ENSTTRP00000006789/1-581 LQKTFEIEL