KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:38 2014 Check: 00 .. Name: ENSP00000334300/1-435 Len: 440 Check: 2584 Weight: 1.00 Name: ENSBTAP00000025933/1-438 Len: 440 Check: 5480 Weight: 1.00 Name: ENSTTRP00000000382/1-434 Len: 440 Check: 974 Weight: 1.00 Name: bmy_22600T0/1-440 Len: 440 Check: 140 Weight: 1.00 Name: BACU007356/1-419 Len: 440 Check: 5956 Weight: 1.00 // 1 50 ENSP00000334300/1-435 -----MWAPP AAIMGDGPTK KVGNQAPLQT QALQTASLRD GPAKRAVWVR ENSBTAP00000025933/1-438 MALESVWAPQ AAVIGDGLSE RVGEQASPQT QVLQTASLKD GPAKRAVWVR ENSTTRP00000000382/1-434 ------MAPQ AAIIGAGPSE RMGEQASLQT QVLQTASLKD GPAKRAVRVR bmy_22600T0/1-440 MALKSVWAPQ AAIIGDGPSE RMGEQASLQT QVLQTASLKD GPAKRAVWVR BACU007356/1-419 ---------- ---------- -MGEQASLQT QVLQTASLKD GPAKRAVWVR 51 100 ENSP00000334300/1-435 HTSSEPQEPT ESKAAKERPK QEVTKAVVVD LGTGYCKCGF AGLPRPTHKI ENSBTAP00000025933/1-438 RDHSEP-EPT TSPEV-KKPK LELTKAVVVD LGTGYCKCGF AGLPKPTHRI ENSTTRP00000000382/1-434 RNHSEPEEPT KSPVVNNKSK LESTKAVVVD LGTGYCKCGF AGLPKPTHVI bmy_22600T0/1-440 RNHSEPEEPT KSPAVNKKSK LELTKAVVVD LGTGYCKCGF AGLPKPTHVI BACU007356/1-419 RNHSEPEEPT KSPVVNKKSK LELTKAVVVD LGTGYCKCGF AGLPKPTHVI 101 150 ENSP00000334300/1-435 STTVGKPYME TAKTGDNRKE TFVGQELNNT NVHLKLVNPL RHGIIVDWDT ENSBTAP00000025933/1-438 STTVGKPYME TAKTGDNRKE TFVGHELINP EVRLKLINPL RHGIIVDWDT ENSTTRP00000000382/1-434 SSTVGKPYME TTKTGDNRKE TFVGQELVNP EVRLKLINPL RHGIIVDWDT bmy_22600T0/1-440 SSTVGKPYME TAKTGDNRKE TFVGHELVNP EVRLKLINPL RHGIIVDWDT BACU007356/1-419 SSTVGKPYME TAKTGDNRKE TFVGHELVNP EVRLKLINPL RHGVIVDWDT 151 200 ENSP00000334300/1-435 VQDIWEYLFR QEMKIAPEEH AVLVSDPPLS PHTNREKYAE MLFEAFNTPA ENSBTAP00000025933/1-438 VQDIWEYLFH QEMKIAPEEH AVLVSDPPLS PHTNREKYAE MLFETFKTPA ENSTTRP00000000382/1-434 VQDIWDYLFR QEMKIAPEKH AVLVSDPPLS PHTNREKYAE MLFETFKTPA bmy_22600T0/1-440 VQDIWDYLFH QEMKIAPEEH AVLVSDPPLS PHTNREKYAE MLFETFRTPA BACU007356/1-419 VQDIWDYLFH QEMKIAPEEH AVLVSDPPLS PHTNREKYAE MLFETFRTPA 201 250 ENSP00000334300/1-435 MHIAYQSRLS MYSYGRTSGL VVEVGHGVSY VVPIYEGYPL PSITGRLDYA ENSBTAP00000025933/1-438 MHIAYQSRLS MYSYGRTSGL VVEVGHGVSY VVPIYEGYPL PSITGRLDYA ENSTTRP00000000382/1-434 MHIAYQSRLS MYSYGRTSGL VVEVGHGVSY VVPIYEGYPL PSITGRLDYA bmy_22600T0/1-440 MHIAYQSRLS MYSYGRTSGL VVEVGHGVSY VVPIYEGYPL PSITGRLDYA BACU007356/1-419 MHIAYQSRLS MYSYGRTSGL VVEVGHGVSY VVPIYEGYPL PSITGRLDYA 251 300 ENSP00000334300/1-435 GSDLTAYLLG LLNSAGNEFT QDQMGIVEDI KKKCCFVALD PIEEKKVPLS ENSBTAP00000025933/1-438 GSDLTTYLMC LMNTAGKHFT EGQLGIVEDI KKKCCFVALD PIEEKKVPAT ENSTTRP00000000382/1-434 GSDLTTYLMG LMNNSGKHFT EDQLGIVEDI KKKCCFVALD PTEEKKVPAT bmy_22600T0/1-440 GSDLTTYLMG LMNNSGKHFT EDQLGIVEDI KKKCCFVALD PTEEKKVPAT BACU007356/1-419 GSDLTTYLMG LMNNSGKHFT EDQLGIVEDI KKKCCFVALD PTEEKKVPAT 301 350 ENSP00000334300/1-435 EHTIRYVLPD GKEIQLCQER FLCSEMFFKP SLIKSMQLGL HTQTVSCLNK ENSBTAP00000025933/1-438 EHMIQYTLPD GQAIYLCQER FLCSEMFFKP SLIKSMQLGL HTQTVSCLNK ENSTTRP00000000382/1-434 EHTIQYTLPD GQEIYLRQER FLCSEMFFKP SLIKSMQLGL HTQTVSCLNK bmy_22600T0/1-440 EHTIRYTLPD GQEIXLCQER FLCSEMFFKP SLIESMQLGL HTQTVSCLNK BACU007356/1-419 EHTIWYTLPD GQEIYLCQER FLCSEMFFKP SLIESMQLGL HTQTVSCLNK 351 400 ENSP00000334300/1-435 CDIALKRDLM GNILLCGGST MLSGFPNRLQ KELSSMCPND TPQVNVLPER ENSBTAP00000025933/1-438 CDIALKRDLM GNILLCGGST MLSGFPNRLQ KELSSMCPND TPQVSVLPER ENSTTRP00000000382/1-434 CDIALKRDLM GNILLCGGSS MLSGFPNRLQ KELNSMCPND TPQVNVLPER bmy_22600T0/1-440 CDIALKRDLM GNILLCGGSS MLSGFPNRLQ KELNSMCPND TPQVNVLPGR BACU007356/1-419 CDIALKRDLM GNILLCGGSS MLSGFPNRLQ KELNSMCPND TPQVNVLPER 401 450 ENSP00000334300/1-435 DSAVWTGGSI LASLQGFQPL WVHRFEYEEH GPFFLYRRCF ENSBTAP00000025933/1-438 DTAVWTGGSI LASLQGFQPL WVHRSEYEEH GPFFLYRRCF ENSTTRP00000000382/1-434 DTAVWTGGSI LASLQSFQPL WVHRFEYEEH GPFFLYRRCF bmy_22600T0/1-440 DTAVWTGGSI LASLQGFQPL WVHCFEYEEH GPFFLYRRCF BACU007356/1-419 DTAVWTGGSI LASLQGFQPL WVHRFEYEEH GPFFLYRRCF