KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:39 2014 Check: 00 .. Name: ENSP00000237201/1-294 Len: 299 Check: 3035 Weight: 1.00 Name: BACU016926/1-151 Len: 299 Check: 7970 Weight: 1.00 Name: ENSBTAP00000025934/1-280 Len: 299 Check: 1078 Weight: 1.00 Name: bmy_17069T0/1-282 Len: 299 Check: 4983 Weight: 1.00 Name: ENSTTRP00000009098/1-225 Len: 299 Check: 3465 Weight: 1.00 // 1 50 ENSP00000237201/1-294 MSPRGTGCSA GLLMTVGWLL LAGLQSARGT NVTAAVQDAG LAHEGEGEEE BACU016926/1-151 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025934/1-280 MKSRGAGCSA RLLLTVGWLL LAGLQSTCGI NVT-AIQDPS LAREGEGEPE bmy_17069T0/1-282 MSPGGAGCSA GLLLTVGWLL LAGLQSTYGI NIT-AVQDPS LANEGEVENE ENSTTRP00000009098/1-225 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000237201/1-294 TE---NNDSE TAENYAPPET EDVSNRNVVK EVEFGMCTVT CGIGVREVIL BACU016926/1-151 ---------- ---------- ---------- ---------- KGVGIREVIL ENSBTAP00000025934/1-280 GDEEPENDSE TENEPQAEAE DD-------- ---------S EGIGIREVIL bmy_17069T0/1-282 VEEEAENDSE AENEPQAEAE EDVSNRTVVK EVEFGMCTVT CGVGIREVIL ENSTTRP00000009098/1-225 ---------- ---------- ---SNRTTVK EVEFGMCTVT CGVGIREVIL 101 150 ENSP00000237201/1-294 TNGCPGGESK CVVRVEECRG PTDCGWGKPI SESLESVRLA CIHTSPLNRF BACU016926/1-151 TNGCPGSESK CIVRVEECRG PVDCGWGKPI SESLESVRLA CVHTSPANRF ENSBTAP00000025934/1-280 TSGCPGGESK CIVRVEECRG PVDCGWGRPI SESLEHVRLA CVHTSPENRF bmy_17069T0/1-282 TNGCPGSESK CIVRVEECRG PVDCGWGKPI SESLESVRLA CVHTSPVNRF ENSTTRP00000009098/1-225 TNGCPGSESK CILRVEECRG PVDCGWGKPI SESLESVRLA CVHTSPVNRF 151 200 ENSP00000237201/1-294 KYMWKLLRQD QQSIILVNDS AILEVRKESH PLAFECDTLD NNEIVATIKF BACU016926/1-151 KYIWRLLRPD QQAIILANDS AILEVHRDTH PKAFECETLD NNEIVASIKF ENSBTAP00000025934/1-280 KYIWRLLRPD QQAIILANDS AILEVHRDTH PKAFECETLD NNEIVASIRF bmy_17069T0/1-282 KYIWRLLRPD QQAIILANDS AILEVHRDTH PKAFECETWD NNEI------ ENSTTRP00000009098/1-225 KY-WRLLRPD QQAIILGNDS AILEVHRDTH PKAFECETLD NNEIVASIKF 201 250 ENSP00000237201/1-294 TVYTSSELQM RRSSLPATDA ALIFVLTIGV IICVFIIFLL IFIIINWAAV BACU016926/1-151 TIYTTT---- ---------- --------GK YPTMF----- ------WFAY ENSBTAP00000025934/1-280 TIYTTTELQM KRASRPDTDA VLVFVLTIGV IICIFVIFVL IFIIINWTAV bmy_17069T0/1-282 ---------M KRSSRPDTDA VLVFVLTIGV IMCIFVIFLL MFIIINWAAV ENSTTRP00000009098/1-225 TIYTTTELQM KRSSRPDIDA VLVLVLTMGV IMCIFVVFVL IFIIINWAAV 251 300 ENSP00000237201/1-294 KAFWGAKAST PEVQSEQSSV RYKDSTSLDQ LPT-EMPG-E DDALSEWNE BACU016926/1-151 ISNFKAHQNP LEV-----SL KHR---SLAQ PP-------- --------- ENSBTAP00000025934/1-280 KDFWGAKAST TEIQSELSSM RYKDSTSLDQ SPT-DIPGHE DDALSEWNE bmy_17069T0/1-282 KDFWGAKAST TEIQSELSSV RYKDSTRVDQ SPT-EIPGHE DDASSEWNE ENSTTRP00000009098/1-225 KDFWGAKAST PETQSELSSV RYKDLSSLDQ SPTSEIPGHE DDALSEWNE