KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:39 2014 Check: 00 .. Name: bmy_04621T0/1-279 Len: 431 Check: 712 Weight: 1.00 Name: BACU016297/1-424 Len: 431 Check: 4460 Weight: 1.00 Name: ENSP00000362702/1-347 Len: 431 Check: 3831 Weight: 1.00 Name: ENSTTRP00000012281/1-347 Len: 431 Check: 6319 Weight: 1.00 Name: ENSBTAP00000025935/1-313 Len: 431 Check: 3855 Weight: 1.00 // 1 50 bmy_04621T0/1-279 ---------- ---------- ----MEGART ---------- -TSATPR--- BACU016297/1-424 MPKEGHRLSS VRWPGTADWN QADGLDGPTC ASRPLNPLPP GPLELPGVSV ENSP00000362702/1-347 MPR-----RE VCWEAAHFRQ EEQSLPRPRV --RALVRLAC RMAGQPG--- ENSTTRP00000012281/1-347 VPR-----IQ VCREAVHSRQ GRQSLPRPRA --RVLVRLAC RMAGQPS--- ENSBTAP00000025935/1-313 ---------- ---------- ---------- ---------- -MAGQPS--- 51 100 bmy_04621T0/1-279 ---------- ---------- -GPRTLPTH- ---------- ---------- BACU016297/1-424 SHKDSGGAVD EMRKLIRNTE TGILRPASPT VCDIPARPGA EPCKRRDIMD ENSP00000362702/1-347 -HMPHGGSSN NLCHTL---- -GPVHPPDPQ ---------- ---------- ENSTTRP00000012281/1-347 -HLPHGGSPN NLCHTP---- -GPAHPPDPQ ---------- ---------- ENSBTAP00000025935/1-313 -HMPHGGNPN NLCHTL---- -GPAHPPDPQ ---------- ---------- 101 150 bmy_04621T0/1-279 -------RHP NALSFRCSLA DFQIEKKIGR GQFSEVYKAT CLLDRKTVAL BACU016297/1-424 NKSRRKIRHP NALSFRCSLA DFQIEKKIGR GQFSEVYKAT CLLDRKTVAL ENSP00000362702/1-347 -------RHP NTLSFRCSLA DFQIEKKIGR GQFSEVYKAT CLLDRKTVAL ENSTTRP00000012281/1-347 -------RHP NALSFRCSLA DFQIEKKIGR GQFSEVYKAT CLLDRKTVAL ENSBTAP00000025935/1-313 -------RHP NALSFRCSLA DFQIEKKIGR GQFSEVYKAT CLLDRKTVAL 151 200 bmy_04621T0/1-279 KKVQIFEMMD AKARQDCVKE IGLLKQLNHP NIIKYLDSFI EDNELNIVLE BACU016297/1-424 KKVQIFEMMD AKARQDCVKE IGLLKQLNHP NIIKYLDSFI EDNELNIVLE ENSP00000362702/1-347 KKVQIFEMMD AKARQDCVKE IGLLKQLNHP NIIKYLDSFI EDNELNIVLE ENSTTRP00000012281/1-347 KKVQIFEMMD AKARQDCVKE IGLLKQLNHP NIIKYLDSFI EDSELNIVLE ENSBTAP00000025935/1-313 KKVQIFEMMD AKARQDCVKE IGLLKQLNHP NIIKYLDSFI EDNELNIVLE 201 250 bmy_04621T0/1-279 LADAGDLSQM IK-------- ---------- ---------- ------YFKK BACU016297/1-424 LADAGDLSQM IKLGCPDKGA KASPMAALEK EVCSEVNKNL VPSYRCYFKK ENSP00000362702/1-347 LADAGDLSQM IK-------- ---------- ---------- ------YFKK ENSTTRP00000012281/1-347 LADAGDLSQM IK-------- ---------- ---------- ------YFKK ENSBTAP00000025935/1-313 LADAGDLSQM IK-------- ---------- ---------- ------YFKK 251 300 bmy_04621T0/1-279 QKRLIPERTV WKYFVQLCSA VEHMHSRRVM HRDIKPANVF ITATGIVKLG BACU016297/1-424 QKRLIPERTV WKYFVQLCSA VEHMHSRRVM HRDIKPANVF ITATGIVKLG ENSP00000362702/1-347 QKRLIPERTV WKYFVQLCSA VEHMHSRRVM HRDIKPANVF ITATGVVKLG ENSTTRP00000012281/1-347 QKRLIPKRTV WKYFVQLCSA VEHMHSRRVM HRDIKPANVF ITATGIVKLG ENSBTAP00000025935/1-313 QKRLIPERTV WKYFVQLCSA VEHMHSRRVM HRDIKPANVF ITATGIVKLG 301 350 bmy_04621T0/1-279 DLGLGRFFSS ETTAAHSLGK GPVHAQP--- -------PAG SW----MTWG BACU016297/1-424 DLGLGRFFSS ETTAAHSLVG TPYYMSPERI HENGYNFKSD IWSLGCLLYE ENSP00000362702/1-347 DLGLGRFFSS ETTAAHSLVG TPYYMSPERI HENGYNFKSD IWSLGCLLYE ENSTTRP00000012281/1-347 DLGLIRFFSS ETTAVHSLMG TPYYMSPERI HENGYNFKSD IWSLGCLLYE ENSBTAP00000025935/1-313 DLGLGRFFSS ETTAAHSLVG TPYYMSPERI HENGYNFKSD IWSLGCLLYE 351 400 bmy_04621T0/1-279 DA-------- DPVPMVPLNS DQRGVNQGPE EPRMGLPCIL THSRFRGWGD BACU016297/1-424 MAALQSPFYG DKMNLFSLCQ KIEQCDYPP- -----LPGEH YSEKLRELVS ENSP00000362702/1-347 MAALQSPFYG DKMNLFSLCQ KIEQCDYPP- -----LPGEH YSEKLRELVS ENSTTRP00000012281/1-347 MAALQSPFYG DKMNLFSLCQ KIEQCDYPP- -----LPGEH YSEKLRELVS ENSBTAP00000025935/1-313 MAALQSPFYG DKMNLFSLCQ KIEQCDYPP- -----LPGEH YSEKLRELVS 401 450 bmy_04621T0/1-279 VALW--SHRQ PFRLSRCCVV SHRV------ - BACU016297/1-424 MCIHPDPNQR P-DISYVHQV AKQMHVWTSS T ENSP00000362702/1-347 MCICPDPHQR P-DIGYVHQV AKQMHIWMSS T ENSTTRP00000012281/1-347 MCIHPDPNQR P-DISYVHQV AKQMHVWTSS T ENSBTAP00000025935/1-313 MCIHPDPNQR P-DITYVHQI AKQMHVWTSS T