KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:39 2014 Check: 00 .. Name: ENSTTRP00000003733/1-339 Len: 930 Check: 9649 Weight: 1.00 Name: BACU008269/1-899 Len: 930 Check: 5090 Weight: 1.00 Name: bmy_21609T0/1-198 Len: 930 Check: 7650 Weight: 1.00 Name: ENSP00000270642/1-336 Len: 930 Check: 4295 Weight: 1.00 Name: ENSBTAP00000025938/1-336 Len: 930 Check: 7030 Weight: 1.00 // 1 50 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 MLKESKLTNF QQRHIVDTMK RGDTLPLQCS PTSSQRVLPS KPPASAICLP bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 PILASRSHLR TASMCQANGT YSREQSKPQA TRDLEKEKRR LQNIFATGKE bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 PEERKRKPPP VRQEDPAPEL DRCEELVKEI QERKEFLADM EALGQGRQYR bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ------MPPP ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ------MPPP ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- VCMCV----- BACU008269/1-899 GIILTEISQK LQEMEDLDHK NLTQKPERHI PEILAAGGRM SLACAFRSTC bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ----APGARL RLLAA----- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ----APGARL RLLAA----- 201 250 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 KETKALFLSW KRPNMSSNTD GSSNSSSSVL HFTLKPKDHD TTLGCHLNFS bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 PANLTGSSMV CLQEASPARL LYSSSSLEKT LQCNCSFHGI PTPSVQWLMG bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ----CVLCIC ACIRPVC--- BACU008269/1-899 GVPVGLNNMN NILQVTFSII APWANSTISL LGEPEIVTGL HCEGKNQYGT bmy_21609T0/1-198 ---------- ---------- ---------- ---------- MCVSKN---- ENSP00000270642/1-336 ---------- ---------- ---------- ----AALAGL AVISRG---- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ----AALAGL AVISRG---- 351 400 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 HTSSIFLIKD KNSVSSAFVK GLIQGIVYGP IASALFFFFL VLLAMKMRKW bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000003733/1-339 ---------- ---------- ---------- -TCAYLFVSA RLLSQSLEFS BACU008269/1-899 WEESHIPMAS EALILKKPEL LEEPETPKES EAETSPASVR GLLSQSLEFS bmy_21609T0/1-198 ---------- ---------- ---------- -------NSE WLLSQSLEFS ENSP00000270642/1-336 ---------- ---------- ---------- ---------- -LLSQSLEFN ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- -LLSQSLEFS 451 500 ENSTTRP00000003733/1-339 SPADNYTVCE GDNATLSCFI DEHVTRVAWL NRSNILYAGN DRWTSDPRVR BACU008269/1-899 SPADNYTVCE GDNATL---- ---------- ---------- ----SDPRVR bmy_21609T0/1-198 SPADNYTVCE GDNATLSCFI DEHVTRVAWL NRSNILYAGN DRWTSDPRVR ENSP00000270642/1-336 SPADNYTVCE GDNATLSCFI DEHVTRVAWL NRSNILYAGN DRWTSDPRVR ENSBTAP00000025938/1-336 SPADNYTVCE GDNATLSCFI DEHVTRVAWL NRSNILYAGN DRWTSDPRVR 501 550 ENSTTRP00000003733/1-339 LLTNTPEEFS ILITQVGLGD EGLYTCSFQT RRQPYTTQVY LIVHVPTRIV BACU008269/1-899 LLTNTPEEFS ILITQVGLGD EGLYTCSFQT RRQPYTTQVY LIVHVPARIV bmy_21609T0/1-198 LLTNTPEEFS ILITQVGLGD EGLYTCSFQT RRQPYTTQVY LIVHVPARIV ENSP00000270642/1-336 LLINTPEEFS ILITEVGLGD EGLYTCSFQT RHQPYTTQVY LIVHVPARIV ENSBTAP00000025938/1-336 LLTNTPEEFS ILITQVGLGD EGLYTCSFQT RHQPYTTQVY LIVHVPARIV 551 600 ENSTTRP00000003733/1-339 NISAPVTVNE GSNVNMI-LA VGQPEPTVTR QLRGCLRDGF TSEGEILEIY BACU008269/1-899 NISSPVTVNE GSNVNLLCLA VGRPEPTVTW RQ---LRDGF TSEGEILEIY bmy_21609T0/1-198 NISSPVTVNE GSNVNLLCLA VGRPEPTVTW RQ---LRDGF TSEGEILEIY ENSP00000270642/1-336 NISSPVTVNE GGNVNLLCLA VGRPEPTVTW RQ---LRDGF TSEGEILEIS ENSBTAP00000025938/1-336 NISSPVTVNE GSNVNLLCLA VGRPEPTVTW RQ---LRDGF TSEGEILEIS 601 650 ENSTTRP00000003733/1-339 DIQRGQAGEY E--------- ---------- ---------- ---------- BACU008269/1-899 DIQRGQAGEY ECVTHNGVTS APDSRRVLVT VNYPPTITDV TSARTAVGRA bmy_21609T0/1-198 DIQRGQAGEY E--------- ---------- ---------- ---------- ENSP00000270642/1-336 DIQRGQAGEY E--------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 DIQRGQAGEY E--------- ---------- ---------- ---------- 651 700 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 ALLRCEAMAV PPADFQWYKD DRLLSSGTAE GLKVQTERTR SMLLFANVSA bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000003733/1-339 ---------- ---------- ---------- ---------- ---------- BACU008269/1-899 RHYGNYTCRA ANRLGMSSAS MRLLLPARIV NISSPVTVNE GSNVNLLCLA bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025938/1-336 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000003733/1-339 ---------- ---------- ---------- --------CV THNGVNSAPD BACU008269/1-899 VGRPEPTVTW RQLRDGFTSE GEILEIYDIQ RGQAGEYECV THNGVTSAPD bmy_21609T0/1-198 ---------- ---------- ---------- --------CV THNGVNSAPD ENSP00000270642/1-336 ---------- ---------- ---------- --------CV THNGVNSAPD ENSBTAP00000025938/1-336 ---------- ---------- ---------- --------CV THNGVNSAPD 801 850 ENSTTRP00000003733/1-339 SRRVLVTVNY PPTITDVTSA RTAVGRAALL RCEAMAVPPA DFQWYKDDRL BACU008269/1-899 SRRVLVTVNY PPTITDVTSA RTAVGRAALL RCEAMAVPPA DFQWYKDDRL bmy_21609T0/1-198 SRRVLVTVN- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 SRRVLVTVNY PPTITDVTSA RTALGRAALL RCEAMAVPPA DFQWYKDDRL ENSBTAP00000025938/1-336 SRRVLVTVNY PPTITDVTSA RTAVGRAALL RCEAMAVPPA DFQWYKDDRL 851 900 ENSTTRP00000003733/1-339 LSSGTAEGLK VQTERTRSML LFANVSARHY GNYTCRAANR LGMSSASMRL BACU008269/1-899 LSSGTAEGLK VQTERTRSML LFANVSARHY GNYTCRAANR LGMSSASMRL bmy_21609T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSP00000270642/1-336 LSSGTAEGLK VQTERTRSML LFANVSARHY GNYTCRAANR LGASSASMRL ENSBTAP00000025938/1-336 LSSGTAEGLK VQTERTRSML LFANVSARHY GNYTCRAANR LGTSSASMRL 901 950 ENSTTRP00000003733/1-339 LRPGSLENSA PRPPGPLTLL SALGWLWWRM BACU008269/1-899 LRPGSLENSA PRPPGPLTLL SALGWLWWRM bmy_21609T0/1-198 ---------- ---------- ---------- ENSP00000270642/1-336 LRPGSLENSA PRPPGLLALL SALGWLWWRM ENSBTAP00000025938/1-336 LRPGSLENSA PRPPGPLTLL SALGWLWWRM