KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:27:39 2014 Check: 00 .. Name: ENSP00000286733/1-359 Len: 359 Check: 2770 Weight: 1.00 Name: ENSBTAP00000025945/1-357 Len: 359 Check: 8444 Weight: 1.00 Name: bmy_18619T0/1-339 Len: 359 Check: 1099 Weight: 1.00 Name: ENSTTRP00000011770/1-355 Len: 359 Check: 6187 Weight: 1.00 // 1 50 ENSP00000286733/1-359 MRTADREARP GLPSLLLLLL AGAGLSAASP PAAPRFNVSL DSVPELRWLP ENSBTAP00000025945/1-357 MRAAGPSARP ALALLLLLAG AGVLAAAAAP LAPPLFNVSL DAAPQLRWLP bmy_18619T0/1-339 MRAACLSART ALA-LLLLAG AGLSAAASSP -APPLFNVSL DAAPELRWLP ENSTTRP00000011770/1-355 MRAAGPSARM ALA-LLLLAG AGVSAAASSS -APPLFNVSL DAAPELRWLP 51 100 ENSP00000286733/1-359 VLRHYDLDLV RAAMAQVIGD RVPKWVHVLI GKVVLELERF LPQPFTGEIR ENSBTAP00000025945/1-357 VLQHYDRDFL HSAMAHIIGD YVPQWVLALI RKVVPELELL LPQPFADEIR bmy_18619T0/1-339 ILQHFDRDFL RAAMAHVIGD NVPKWVLALI RKAVWELELF LPQPFTDEIR ENSTTRP00000011770/1-355 VLQHFDRDFL RASMARIIGD TVPKWVLALI RKAVWELELF LPQPFTDEIR 101 150 ENSP00000286733/1-359 GMCDFMNLSL ADCLLVNLAY ESSVFCTSIV AQDSRGHIYH GRNLDYPFGN ENSBTAP00000025945/1-357 GMCDALDFNL VDCILLNLAY EFSAFCTSIV AQDSKGHIYH GRNLDYVFGS bmy_18619T0/1-339 GQCDALNFNL ADCILLNLAY EYTAFCTSIV AQDSKGNXYH GRNLDYAFGN ENSTTRP00000011770/1-355 GQCDALNFTL ADCILLNLAY ESTAFCTSIV AQDSKGNIYH GRNLDYSFGN 151 200 ENSP00000286733/1-359 VLRKLTVDVQ FLKNGQIAFT GTTFIGYVGL WTGQSPHKFT VSGDERDKGW ENSBTAP00000025945/1-357 FLRNLTLDVQ FIKNGQIAYT GTTFVGYVGL WTGQSPHKFT VSGDERDKGW bmy_18619T0/1-339 FLRNLTVDVQ FIKNGQIAFT GTTFIGYVGL WTGQSPHKFT VSGDERDKGW ENSTTRP00000011770/1-355 FLRKLTVDVQ FIKNGQVAFT GTTFIGYVGL WTGQSPHKFT VSGDERDKGS 201 250 ENSP00000286733/1-359 WWENAIAALF RRHIPVSWLI RATLSESENF EAAVGKLAKT PLIADVYYIV ENSBTAP00000025945/1-357 WWENMIAALF QRHSPVSWLI RTTLSESENF EAAVYKLAKT PLIADVYYIV bmy_18619T0/1-339 WWENMIAALF QRHSPVSWLI RTTLSESENF EAAVYKLAKT PLIADVYYIV ENSTTRP00000011770/1-355 WWENMIAALF QRHSPVSWLI RTTLSESENF EAAVYELAKT PLMADVYYIV 251 300 ENSP00000286733/1-359 GGTSPREGVV ITRNRDGPAD IWPLDPLNGA WFRVETNYDH WKPAPKEDDR ENSBTAP00000025945/1-357 GGTSPKEGVV ITRNRGGPAD IWPLDPLNGA WFRVETNYDH WKPVPKADDR bmy_18619T0/1-339 GGTSPREGVV ITRNRDGPAD IWPLDPLNGA WFRVETNYDH WKPVPKRDDR ENSTTRP00000011770/1-355 GGTFPQEGVV ITRNRDGPAD IWPLDPLNGA WFRVETNYDH WKPVPKRDDR 301 350 ENSP00000286733/1-359 RTSAIKALNA TGQANLSLEA LFQILSVVPV YNNFTIYTTV MSAGSPDKYM ENSBTAP00000025945/1-357 RTPAIKALNA TGQANLSLET LFQVLSVFPV CNNYTIYTTI MSAANPDKYM bmy_18619T0/1-339 RTPAIKALNA TGQANLSLET LFQLHSLY-- YGN------- -ECCQP---- ENSTTRP00000011770/1-355 RTPAIKALNA TGQANLSLET LFQVLSVFPV YNNYTIYTTV MSAASPDKYM 351 400 ENSP00000286733/1-359 TRIRNPSRK ENSBTAP00000025945/1-357 TRIRNLS-- bmy_18619T0/1-339 RQVHD---- ENSTTRP00000011770/1-355 TRIRNPS--