KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:41 2014 Check: 00 .. Name: ENSTTRP00000008943/1-472 Len: 570 Check: 5314 Weight: 1.00 Name: ENSP00000345772/1-435 Len: 570 Check: 5726 Weight: 1.00 Name: ENSBTAP00000025965/1-514 Len: 570 Check: 5753 Weight: 1.00 Name: bmy_10974T0/1-542 Len: 570 Check: 2126 Weight: 1.00 Name: BACU018054/1-460 Len: 570 Check: 7656 Weight: 1.00 // 1 50 ENSTTRP00000008943/1-472 ---------- ---------- ---------- ---------- ---------- ENSP00000345772/1-435 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025965/1-514 ---------- ---------- ---------- -APLHQHHPR PAPQSLPVQE bmy_10974T0/1-542 MWARAGASVW VVYGLLWGRG GAGTGSGMEE WVGLSKAVGQ APSQLLPYQP BACU018054/1-460 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008943/1-472 ---------- ---------- ---------- ---------- --------LS ENSP00000345772/1-435 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025965/1-514 QYGPAHSAHS GQPPPHDPPR PPSSLPRARR SRPAGA---- PPRDRTRSSG bmy_10974T0/1-542 VSLPSHDSWG SSCPEFRFLG RVLMSYLLGK AKLYPSWVWD PPQATAQAAQ BACU018054/1-460 ---------- ---------- ---------- ---------- ---MQAQAAQ 101 150 ENSTTRP00000008943/1-472 CPVGSGPEPR ATSTIASNSW NASSSPGEAR EDGPEGLDKG LDNDAEGVWS ENSP00000345772/1-435 ---------- ----IASNSW NASSSPGEAR EDGPEGLDKG LDNDAEGVWS ENSBTAP00000025965/1-514 CPVGSGPEPR ATSTIASNSW NASSSPGEAR EDGPEGLDKG LDNDAEGVWS bmy_10974T0/1-542 WAQAQSPEPR ATSTIASNSW NASNSPGEAR EDGPEGLDKG LDNDAEGVWS BACU018054/1-460 WAQAQSPEPR ATSTIASNSW NASSSPGEAR EDGPEGLDKG LDNDAEGVWS 151 200 ENSTTRP00000008943/1-472 PDIEQSFQEA LAIYPPCGRR KIILSDEGKM YGRNELIARY IKLRTGKTRT ENSP00000345772/1-435 PDIEQSFQEA LAIYPPCGRR KIILSDEGKM YGRNELIARY IKLRTGKTRT ENSBTAP00000025965/1-514 PDIEQSFQEA LAIYPPCGRR KIILSDEGKM YGRNELIARY IKLRTGKTRT bmy_10974T0/1-542 PDIEQSFQEA LAIYPPCGRR KIILSDEGKM YGRNELIARY IKLRTGKTRT BACU018054/1-460 PDIEQSFQEA LAIYPPCGRR KIILSDEGKM YGRNELIARY IKLRTGKTRT 201 250 ENSTTRP00000008943/1-472 RKQXXXXXXX XXXXXXXXXX XXXXVSSHLQ VLARRKSREI QSKLKSPPQD ENSP00000345772/1-435 RKQ------- ---------- ----VSSHIQ VLARKKVREY QVGIKAMNLD ENSBTAP00000025965/1-514 RKQ------- ---------- ----VSSHIQ VLARKKVREY QVGIKAMNLD bmy_10974T0/1-542 RKQ------- ---------- ----VSSHLQ VLARRKSREI QSKLKAMNLD BACU018054/1-460 RKQVSSHIQV LARKKVREYQ VGIKVSSHLQ VLARRKSREI QSKLKAMNLD 251 300 ENSTTRP00000008943/1-472 QVSKDKALQS MASMSSAQIV SASVLQNKFS PPSPLPQAVF STSSRFWSSP ENSP00000345772/1-435 QVSKDKALQS MASMSSAQIV SASVLQNKFS PPSPLPQAVF STSSRFWSSP ENSBTAP00000025965/1-514 QVSKDKALQS MASMSSAQIV SASVLQNKFS PPSPLPQAVF SASSRFWSSP bmy_10974T0/1-542 QVSKDKALQS MASMSSAQIV SASVLQNKFS PPSPLPQAVF STSSRVQGSW BACU018054/1-460 QVSKDKALQS MASMSSAQIV SASVLQNKFS PPSPLPQAVF STSSRVQGSW 301 350 ENSTTRP00000008943/1-472 PLLGQQPGPS QDIKPFAQPA YPVQPPLPPT LSSYEPLAPL PSAAASVPVW ENSP00000345772/1-435 PLLGQQPGPS QDIKPFAQPA YPIQPPLPPT LSSYEPLAPL PSAAASVPVW ENSBTAP00000025965/1-514 PLLGQQPGPS QDIKPFAQPT YPVQPPLPPT LSNYEPLAPL PSAAASVPVW bmy_10974T0/1-542 EV-------G LGIKPFAQPA YPVQPPLPPT LSSYEPLAPL PSAAASVPVW BACU018054/1-460 EV-------G LGIKPFAQPA YPVQPPLPPT LST------- ---AASVPVW 351 400 ENSTTRP00000008943/1-472 QDRTIASSRL RLLEYSAFME VQRDPDTYSK HLFVHIGQTN PAFSDPPLEA ENSP00000345772/1-435 QDRTIASSRL RLLEYSAFME VQRDPDTYSK HLFVHIGQTN PAFSDPPLEA ENSBTAP00000025965/1-514 QDRTIASSRL RLLEYSAFME VQRDPDTYSK HLFVHIGQTN PAFSDPPLEA bmy_10974T0/1-542 QDRTIASSRL RLLEYSAFME VQRDPDTYSK HLFVHIGQTN PAFSDPPLEA BACU018054/1-460 QDRTIASSRL RLLEYSAFME VQRDPDTYSK HLFVHIGQTN PAFSDPPLEA 401 450 ENSTTRP00000008943/1-472 VDVRQIYDKF PEKKGGLKEL YEKGPPNAFF LVKFWADLNS TIQEGPGAFY ENSP00000345772/1-435 VDVRQIYDKF PEKKGGLKEL YEKGPPNAFF LVKFWADLNS TIQEGPGAFY ENSBTAP00000025965/1-514 VDVRQIYDKF PEKKGGLKEL YEKGPPNAFF LVKFWADLNS TIQEGPGAFY bmy_10974T0/1-542 VDVRQIYDKF PEKKGGLKEL YEKGPPNAFF LVKFWADLNS TIQEGPGAFY BACU018054/1-460 VDVRQIYDKF PEKKGGLKEL YEKGPPNAFF LVKFWADLNS TIQEGPGAFY 451 500 ENSTTRP00000008943/1-472 GVSSQYSSAD SMTISVSTKV CSFGKQVVEK VETEYARLEN GRFVYRIHRS ENSP00000345772/1-435 GVSSQYSSAD SMTISVSTKV CSFGKQVVEK VETEYARLEN GRFVYRIHRS ENSBTAP00000025965/1-514 GVSSQYSSAD SMTISVSTKV CSFGKQVVEK VETEYARLEN GRFVYRIHRS bmy_10974T0/1-542 GVSSQYSSAD SMTISVSTKV CSFGKQVVEK VETEYARLEN GRFVYRIHRS BACU018054/1-460 GVSSQYSSAD SMTISVSTKV CSFGKQVVEK VETEYARLEN GRFVYRIHRS 501 550 ENSTTRP00000008943/1-472 PMCEYMINFI HKLKHLPEKY MMNSVLENFT ILQVVTSRDS QETLLVIAFV ENSP00000345772/1-435 PMCEYMINFI HKLKHLPEKY MMNSVLENFT ILQVVTSRDS QETLLVIAFV ENSBTAP00000025965/1-514 PMCEYMINFI HKLKHLPEKY MMNSVLENFT VLQVVTSRDS QETLLVIAFV bmy_10974T0/1-542 PMCEYMINFI HKLKHLPEKY MMNSVLENFT ILQVVTSRDS QETLLVIAFV BACU018054/1-460 PMCEYMINFI HKLKHLPEKY MMNSVLENFT ILQVVTSRDS QETLLVIAFV 551 600 ENSTTRP00000008943/1-472 FEVSTSEHGA QHHVYKLVKD ENSP00000345772/1-435 FEVSTSEHGA QHHVYKLVKD ENSBTAP00000025965/1-514 FEVSTSEHGA QHHVYKLVKD bmy_10974T0/1-542 FEVSTSEHGA QHHVYKLVKD BACU018054/1-460 FEVSTSEHGA QHHVYKLVKD