KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:44 2014 Check: 00 .. Name: BACU000419/1-458 Len: 510 Check: 7770 Weight: 1.00 Name: ENSTTRP00000006998/1-506 Len: 510 Check: 6617 Weight: 1.00 Name: bmy_22008T0/1-423 Len: 510 Check: 4357 Weight: 1.00 Name: ENSP00000298428/1-476 Len: 510 Check: 2254 Weight: 1.00 Name: ENSBTAP00000025985/1-476 Len: 510 Check: 2254 Weight: 1.00 // 1 50 BACU000419/1-458 ---------- ---------- ---------- MGIRFLEVIK PFCAVLPEIQ ENSTTRP00000006998/1-506 VGSGCRGPSR GTRAKAALRS QGPAGPLPPP WAVKFLEVIK PFCAVLPEIQ bmy_22008T0/1-423 ---------- ---------- ---------- ---------- ---------- ENSP00000298428/1-476 ---------- ---------- ---------- MGIKFLEVIK PFCAVLPEIQ ENSBTAP00000025985/1-476 ---------- ---------- ---------- MGIKFLEVIK PFCAVLPEIQ 51 100 BACU000419/1-458 KPERKIQFRE KVLWAAVTLH LLSMLSDT-I FGIMSSDSAD PFSWMRVILA ENSTTRP00000006998/1-506 KPERKIQFRE KVLWTAITLF IFLVCCQIPL FGIMSSDSAD PFYWMRVILA bmy_22008T0/1-423 ---------- ---------- ---------- ---MSSDSAD PFYWMRVILA ENSP00000298428/1-476 KPERKIQFRE KVLWTAITLF IFLVCCQIPL FGIMSSDSAD PFYWMRVILA ENSBTAP00000025985/1-476 KPERKIQFRE KVLWTAITLF IFLVCCQIPL FGIMSSDSAD PFYWMRVILA 101 150 BACU000419/1-458 FNRGTLMELG ISPVVTSGLI MQLLAEAKII EVGDIPKDRA LFIGAPKLSG ENSTTRP00000006998/1-506 SNRGTLMELG ISPIVTSGLI MQLLAGAKII EVGDTPKDRA LFNGAQKLFG bmy_22008T0/1-423 SNRGTLMELG ISPIVTSGLI MQLLAGAKII EVGDTPKDRA LFNGAQKLFG ENSP00000298428/1-476 SNRGTLMELG ISPIVTSGLI MQLLAGAKII EVGDTPKDRA LFNGAQKLFG ENSBTAP00000025985/1-476 SNRGTLMELG ISPIVTSGLI MQLLAGAKII EVGDTPKDRA LFNGAQKLFG 151 200 BACU000419/1-458 MIITIGQGIV YVMTDVYGNL AEMGAGICLL IIIQ-FVAGL IVLLLDELLQ ENSTTRP00000006998/1-506 MIITIGQAIV YVMTGMYGDP AEMGAGICLL IIIQLFVAGL IVLLLDELLQ bmy_22008T0/1-423 MIITIGQAIV YVMTGMYGDP AEMGAGICLL IIIQLFVAGL IVLLLDELLQ ENSP00000298428/1-476 MIITIGQAIV YVMTGMYGDP AEMGAGICLL IIIQLFVAGL IVLLLDELLQ ENSBTAP00000025985/1-476 MIITIGQAIV YVMTGMYGDP AEMGAGICLL IIIQLFVAGL IVLLLDELLQ 201 250 BACU000419/1-458 KGYGLGSGIS LFIATNFCET IVWKAFSPTT INSGRGTEFE GAVIAVFHLL ENSTTRP00000006998/1-506 KGYGLGSGIS LFIATNICET IVWKAFSPTT INTGRGTEFE GAVIALFHLL bmy_22008T0/1-423 KGYGLGSGIS LFIATNICET IVWKAFSPTT INTGRGTEFE GAVIALFHLL ENSP00000298428/1-476 KGYGLGSGIS LFIATNICET IVWKAFSPTT INTGRGTEFE GAVIALFHLL ENSBTAP00000025985/1-476 KGYGLGSGIS LFIATNICET IVWKAFSPTT INTGRGTEFE GAVIALFHLL 251 300 BACU000419/1-458 ATKTDKGRAL REAFYRQNLP NLMNLMATVF VFA-VIYFQG FHVDLPIKSA ENSTTRP00000006998/1-506 ATRTDKVRAL REAFYRQNLP NLMNLIATVF VFAVVIYFQG FRVDLPIKSA bmy_22008T0/1-423 ATRTDKVRAL REAFYRQNLP NLMNLIATVF VFAVVIYFQG FRVDLPIKSA ENSP00000298428/1-476 ATRTDKVRAL REAFYRQNLP NLMNLIATVF VFAVVIYFQG FRVDLPIKSA ENSBTAP00000025985/1-476 ATRTDKVRAL REAFYRQNLP NLMNLIATVF VFAVVIYFQG FRVDLPIKSA 301 350 BACU000419/1-458 QYRGQYSSYP -KLFYTSNIP IILQSALVSN LYVISQMLSV RFLVNLPGNF ENSTTRP00000006998/1-506 RYRGQYSSYP IKLFYTSNIP IILQSALVSN LYVISQMLSV RF----SGNF bmy_22008T0/1-423 RYRGQYSSYP IKLFYTSNIP IILQSALVSN LYVISQMLSV RF----SGNF ENSP00000298428/1-476 RYRGQYSSYP IKLFYTSNIP IILQSALVSN LYVISQMLSV RF----SGNF ENSBTAP00000025985/1-476 RYRGQYSSYP IKLFYTSNIP IILQSALVSN LYVISQMLSV RF----SGNF 351 400 BACU000419/1-458 LVNLPGQWAD VSWGGPACSY PVGGLCYYLS PSESMGAIFE DPVHVVVYSI ENSTTRP00000006998/1-506 LVNLLGQWAD VSGGGPARSY PVGGLCYYLS PPESMGAIFE DPVHVVVYII bmy_22008T0/1-423 LVNLLGQWAD VSGGGPARSY PVGGLCYYLS PPESMGAIFE DPVHVVVYII ENSP00000298428/1-476 LVNLLGQWAD VSGGGPARSY PVGGLCYYLS PPESMGAIFE DPVHVVVYII ENSBTAP00000025985/1-476 LVNLLGQWAD VSGGGPARSY PVGGLCYYLS PPESMGAIFE DPVHVVVYII 401 450 BACU000419/1-458 FMLGSCAFFS KMWIEVSGSS AKDVAKQLKE QQMVMRGHRD TSVVHELNRY ENSTTRP00000006998/1-506 FMLGSCAFFS KTWIEVSGSS AKDVAKQLKE QQMVMRGHRD TSMVHELNRY bmy_22008T0/1-423 FMLGSCAFFS KTWIEVSGSS AKDVAKQLKE QQMVMRGHRD TSMVHELNRY ENSP00000298428/1-476 FMLGSCAFFS KTWIEVSGSS AKDVAKQLKE QQMVMRGHRD TSMVHELNRY ENSBTAP00000025985/1-476 FMLGSCAFFS KTWIEVSGSS AKDVAKQLKE QQMVMRGHRD TSMVHELNRY 451 500 BACU000419/1-458 IPTAAAFGGL CIGALSVLAD F--RRGHRLR HWNSACSHY- YLSVF----- ENSTTRP00000006998/1-506 IPTAAAFGGL CIGALSVLAD FLGAIGSGTG ILLAVTIIYQ YFEIFVKEQA bmy_22008T0/1-423 IPTAAAFGGL CIGALSVLAD FLGAIGSGTG ILLAVTIIYQ YFEIFVKEQA ENSP00000298428/1-476 IPTAAAFGGL CIGALSVLAD FLGAIGSGTG ILLAVTIIYQ YFEIFVKEQA ENSBTAP00000025985/1-476 IPTAAAFGGL CIGALSVLAD FLGAIGSGTG ILLAVTIIYQ YFEIFVKEQA 501 550 BACU000419/1-458 ---------- ENSTTRP00000006998/1-506 EVGGMGALFF bmy_22008T0/1-423 EVGGMGALFF ENSP00000298428/1-476 EVGGMGALFF ENSBTAP00000025985/1-476 EVGGMGALFF