KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:45 2014 Check: 00 .. Name: ENSBTAP00000025989/1-172 Len: 297 Check: 7839 Weight: 1.00 Name: ENSP00000419628/1-219 Len: 297 Check: 8081 Weight: 1.00 Name: ENSTTRP00000006993/1-227 Len: 297 Check: 3675 Weight: 1.00 Name: bmy_22007T0/1-288 Len: 297 Check: 8047 Weight: 1.00 Name: BACU001750/1-183 Len: 297 Check: 4392 Weight: 1.00 // 1 50 ENSBTAP00000025989/1-172 ---------- ------MEQE TAGSSRNTEQ SIISEELIAE GKWVKLEKTT ENSP00000419628/1-219 ---------- -----MESQE PTESSQNGKQ YIISEELISE GKWVKLEKTT ENSTTRP00000006993/1-227 ---------- -----MEQQE PAD-SQNTKQ SIISEELISE GKWVKLERTT bmy_22007T0/1-288 MPCWIHKTPG DYKVKMAQQE PADSSQNTKQ YIISEELISE GKWVKLEKTT BACU001750/1-183 ---------- ---------- ------MLLF FLVCLN---- ---------- 51 100 ENSBTAP00000025989/1-172 YRDPTGKT-- -------RTW ETVKRTTRKG QSADGVAIIP VLQRTLHYEC ENSP00000419628/1-219 YMDPTGKT-- -------RTW ESVKRTTRKE QTADGVAVIP VLQRTLHYEC ENSTTRP00000006993/1-227 YRDPTGKTRI EKLLLGLRTW ETVKRTTRKG QSADGVAVIP VLQRTLHYEC bmy_22007T0/1-288 YRDPTGKT-- -------RTW ETVKRTTRKG QSADGVAVIP LLQRTLHYEC BACU001750/1-183 ---------- -------RTW ETVKRTTRKG QSADGVAVIP LLQRTLHYEC 101 150 ENSBTAP00000025989/1-172 IILVKQFRPP MGGYCLEFPA G--------- ---------- ---------- ENSP00000419628/1-219 IVLVKQFRPP MGGYCIEFPA G--------- ---------- ---------- ENSTTRP00000006993/1-227 IILVKQFRPP MGGYCLEFPA G--------- ---------- ---------- bmy_22007T0/1-288 IILVKQFRPP MGGYCLEFPA GDIYPSIALQ GPPYGPEGXR QDGKRCPQLA BACU001750/1-183 IILVKQFRPP MGGYCLEFPA G--------- ---------- ---------- 151 200 ENSBTAP00000025989/1-172 -LIDDNESPE AAALRELEEE TGYKGDVAEC SPAVCMDPGL SNCTAHIVTV ENSP00000419628/1-219 -LIDDGETPE AAALRELEEE TGYKGDIAEC SPAVCMDPGL SNCTIHIVTV ENSTTRP00000006993/1-227 -LIDDNESPE AAALRELEEE TGYKGDVAEC SPAVCMDPGL SNCTTHMVTV bmy_22007T0/1-288 CLIDENESPE AAALRELEEE TGYKGDVAEC SPAVCMDPGL SNCTTHIVTV BACU001750/1-183 -LIDENESPE AAALRELEEE TGYKGDVAEC SPAVCMDPGL SNCTTHIVTV 201 250 ENSBTAP00000025989/1-172 TINGDDAENV RPKPKPGDG- ---------- ---------- ------GTSS ENSP00000419628/1-219 TINGDDAENA RPKPKPGDG- ---------- ---------- ---EFVEVIS ENSTTRP00000006993/1-227 TINGDDAENV RPKPKPGDG- ---------- ---------- ---EFVEVIS bmy_22007T0/1-288 TINGDDAENV RPKPKPGKHV LATFTVVGSP GVRLYFHLHF VCLEFVEVIS BACU001750/1-183 TINGDDAENV RPKPKP---- ---------- ---------- ---EFVEVIS 251 300 ENSBTAP00000025989/1-172 HPGG------ ---------- ---------- ---------- ------- ENSP00000419628/1-219 LPKNDLLQRL DALVAEEHLT VDARVYSYAL ALKHANAKPF EVPFLKF ENSTTRP00000006993/1-227 LPKNDLLKRI DDLVANEHLT VDARVYSYAL ALKHANTKPL EEPFLKF bmy_22007T0/1-288 LPKNDLLKRL DALVADEHLT VDARVYSYAL ALKHANTKPF EVPFLKF BACU001750/1-183 LPKNDLLKRL DALVADEHLT VDARVYSYAL ALKHANTKPF EVPFLKF