KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:45 2014 Check: 00 .. Name: ENSP00000394869/1-543 Len: 555 Check: 9865 Weight: 1.00 Name: bmy_01084T0/1-525 Len: 555 Check: 7944 Weight: 1.00 Name: ENSBTAP00000025991/1-524 Len: 555 Check: 6003 Weight: 1.00 Name: BACU019955/1-524 Len: 555 Check: 5854 Weight: 1.00 Name: ENSTTRP00000011877/1-524 Len: 555 Check: 7125 Weight: 1.00 // 1 50 ENSP00000394869/1-543 MPTQQPAAPS TRAPKPSRSL SGSLCALFSD ADSGSGMKAE LPPGPGAVGR bmy_01084T0/1-525 ---------- ---------- MMAAVAVAVR EDSGSGMKAE LVPRPGAGGR ENSBTAP00000025991/1-524 ---------- ---------- -MATAAVAVR EDSGSGMKAE LAPRPGAEGR BACU019955/1-524 ---------- ---------- -MAAVAVAVR EDSGSGMKAE LVPRPGAGGR ENSTTRP00000011877/1-524 ---------- ---------- -LAAVAVAVR EDSGSGMKAE LVPRPGAGGR 51 100 ENSP00000394869/1-543 EMTKEEKLQL RKEKKQQKKK RKEEKGAEPE TGSAVSAAQC Q-GPTRELPE bmy_01084T0/1-525 EMTQEEKLQL RKEKKQQKKK RKEEKGAEPE TVSAVSAAHC QAGPTKDLPG ENSBTAP00000025991/1-524 EMTQEEKLQL RKEKKQQKKK RKEEKGTETE TGSAVSAAQC QVGPAKHLAG BACU019955/1-524 EMTQEEKLQL RKEKKQQKKK RKEEKGAEPE TGSAVSAAHC QAGPTKDLPG ENSTTRP00000011877/1-524 EMTQEEKLQL RKEKKQQKKK RKEEKGAEPE TGSAVSAAQC QAGPTKDLPG 101 150 ENSP00000394869/1-543 SGIQLGTPRE KVPAGRSKAE LRAERRAKQE AERALKQARK GEQGGPPPKA bmy_01084T0/1-525 LDSQLGSAKE KVPAGRSKAE LRAERRAKQE AERALKQAKK GDQGGPPPQA ENSBTAP00000025991/1-524 PDSQLGTAKE KVPAGRSKAE LRAERRAKQE AERALKQARK GDQGGPPPQA BACU019955/1-524 LDSQLGSAKE KVPAGRSKAE LRAERRAKQE AERALKQARK GDQGGPPPQA ENSTTRP00000011877/1-524 LDSQLGSAKE KVPAGRSKAE LRAERRAKQE AERALKQARK GDQGGPPPQA 151 200 ENSP00000394869/1-543 SPSTAGETPS GVKRLPEYPQ VDD-LLLRRL VKKPERQQVP TRKDYGSKVS bmy_01084T0/1-525 CPSTAGEMPS GVKRLPEHSQ VDDSTLLRRL VKKPERQQVP TRKDYGSKVS ENSBTAP00000025991/1-524 CPSTAGETPS GVKRLPEHSQ VDDPTLLRRL VKKPERQQVP TRKDYGSKVS BACU019955/1-524 CPSTAGEMPS GAKRLPEHSQ VDDPMLLRRL VKKPERQQVP TRKDYGSKVS ENSTTRP00000011877/1-524 CPSTAGETPS GVKRLPEHSQ VDDPTLLRRL VKKTERQQVP TRKDYGSKVS 201 250 ENSP00000394869/1-543 LFSHLPQYSR QNSLTQFMSI PSSVIHPAMV RLGLQYSQGL VSGSNARCIA bmy_01084T0/1-525 LFSHLPQYSR QNSLTQFMSI PSSVIHPAMV RLGLQYSQGL VSGSNARCIA ENSBTAP00000025991/1-524 LFSHLPQYSR QNSLTQFMSI PSSVIHPAMV RLGLQYSQGL VSGSNARCIA BACU019955/1-524 LFSHLPQYSR QNSLTQFMSI PSSVIHPAMV RLGLQYSQGL VSGSNARCIA ENSTTRP00000011877/1-524 LFSHLPQYSR QNSLTQFMSI PSSVIHPAMV RLGLQYSQGL VSGSNARCIA 251 300 ENSP00000394869/1-543 LLRALQQVIQ DYTTPPNEEL SRDLVNKLKP YMSFLTQCRP LSASMHNAIK bmy_01084T0/1-525 LLRALQQVIQ DYTTPPNEEL SRDLVNKLKP YFSTKREEEV MSMRNEQGMH ENSBTAP00000025991/1-524 LLRALQQVIQ DYTTPPSEEL SRDLVNKLKP YFSFLTQCRP LSASMYNAIK BACU019955/1-524 LLHALQQVIQ DYTTPPNEEL SRDLVNKLKP YFSFLTQCRP LSASMYNAIK ENSTTRP00000011877/1-524 LLRALQQVIQ DYTTPPSEEL SRDLVNKLKP YFSFLTQCRP LSASMYNAIK 301 350 ENSP00000394869/1-543 FLNKEITSVG S--------- -SKREEEAKS ELRAAIDRYV QEKIVLAAQA bmy_01084T0/1-525 LGDRAGNMFG TPRGATLWSA WSRVKEVAKS ELRAAIDRYV EEKIGLAAQA ENSBTAP00000025991/1-524 FLNKEITGVS G--------- -SKREEEAKS ELRAAIDRYI KEKIVLAAQA BACU019955/1-524 FLNKEITGVS S--------- -SKREEEAKS ELRAAINRYV REKIVLASQA ENSTTRP00000011877/1-524 FLNKEITGVS S--------- -SKREEEAKS ELRAAIDRYV QEKIVLAAQA 351 400 ENSP00000394869/1-543 ISRFAYQKIS NGDVILVYGC SSLVSRILQE AWTEGRRFRV VVVDSRPWLE bmy_01084T0/1-525 ISRFAYKKIS NGDVILVYGC SSLVSRILQE AWAEGRRFRV VVVDSRPRLE ENSBTAP00000025991/1-524 ISRFAYKKIS NGDVILVYGC SSLVSHILQE AWAKGRQFRV VVVDSRPRLE BACU019955/1-524 ISRYAYKKIS NEDVILVYGC SSLVSRILQE AWAKGRRFRV VVVDSRPRLE ENSTTRP00000011877/1-524 ISRSAYEKIS NGDVILVYGR SSLVSRILQE AWAKGRRFRV VVVDSRPRLE 401 450 ENSP00000394869/1-543 GRHTLRSLVH AGVPASYLLI PAASYVLPEV SKVLLGAHAL LANGSVMSRV bmy_01084T0/1-525 GKHTLRSLVR AGVPASYLLI PAASYVLPEV SKVLLGAHAL LANGSVMSRV ENSBTAP00000025991/1-524 AKHTLRSLVR AGVPASYLLI PAASYVLPEV SKVLLGAHAL LANGSVMSRV BACU019955/1-524 GKHMLRFLVR AGVPASYLLI PAASYVLPEV SKVLLGAHAL LANGSVMSRV ENSTTRP00000011877/1-524 GKHTLRFLVR AGVPASYLLI PAASYVLPEV SKLLLGAHAL LANGSVMSRV 451 500 ENSP00000394869/1-543 GTAQLALVAR AHNVPVLVCC ETYKFCERVQ TDAFVSNELD DPDDLQCKRG bmy_01084T0/1-525 GTAQLALVAR AHNVPVLVCC ETYKFCERVQ TDAFVSNEL- ---------G ENSBTAP00000025991/1-524 GTAQLALVAR AHNVPVLVCC ETYKFCERVQ TDAFVSNELD DPDDLLCERG BACU019955/1-524 GTAQLALVAR AHNVPVLVCC ETYKFCERVQ TDAFVSNELD DPDDLLCERG ENSTTRP00000011877/1-524 GTAQLALVAR AHNVPVLVCC ETYKFCERVQ TDAFVSNELD DPDDLLCERG 501 550 ENSP00000394869/1-543 EHVALANWQN HASLRLLNLV YDVTPPELVD LVITELGMIP CSSVPVVLRV bmy_01084T0/1-525 ERVALADWQN HSSLRLLNLV YDVTPPELVD LVITELGMIP CSSVPVVLRV ENSBTAP00000025991/1-524 EHVALANWQN HSSLRLLNLV YDVTPPELVD LVITELGMIP CSSVPVVLRV BACU019955/1-524 ERVALADWQN HSSLRLLNLV YDVTPPELVD LVITELGMIP CSSVPVVLRV ENSTTRP00000011877/1-524 ERVALADWQN HSSLRLLNLV YDVTPPELVD LVITELGMIP CSSVPVVLRV 551 600 ENSP00000394869/1-543 KSSDQ bmy_01084T0/1-525 KSSDQ ENSBTAP00000025991/1-524 KSSDQ BACU019955/1-524 KSSDQ ENSTTRP00000011877/1-524 KSSDQ