KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:46 2014 Check: 00 .. Name: ENSP00000377192/1-545 Len: 818 Check: 4448 Weight: 1.00 Name: ENSBTAP00000025996/1-515 Len: 818 Check: 7456 Weight: 1.00 Name: ENSTTRP00000006647/1-552 Len: 818 Check: 7364 Weight: 1.00 Name: bmy_21779T0/1-485 Len: 818 Check: 1049 Weight: 1.00 Name: BACU010873/1-781 Len: 818 Check: 4676 Weight: 1.00 // 1 50 ENSP00000377192/1-545 MGRRGSAPGN GRTLRGCERG GRRRRSADSV MAEQVALSRT QVCGILREEL ENSBTAP00000025996/1-515 ---------- ---------- ---------- MAEQVALSRT QVCGILREEL ENSTTRP00000006647/1-552 ---------- ---------- ---------- MAGQVALSRT QVCGILREEL bmy_21779T0/1-485 MGRRGAAPGN CRELRGCERD GRQRRSTESI MAGQVALSRT QVCGILREEL BACU010873/1-781 MGRRGAAPGN CRELRGCERD GRQRRSTESI MAGKVALSRT QVCGILREEL 51 100 ENSP00000377192/1-545 FQGDAFHQSD THIFIIMGAS GDLAKKKIYP TIWWLFRDGL LPENTFIVGY ENSBTAP00000025996/1-515 YQGDDFHQAD THIFIIMGAS GDLAKKKIYP TIWWLFRDGL LPEDTYIVGY ENSTTRP00000006647/1-552 YQGDAFHQAD THIFIIMGAS GDLAKKKIYP TIWWLFRDGL LPEDTYIVGY bmy_21779T0/1-485 YQGDAFHQAD THIFIIMGAS GDLAKKKIYP TIWWLFRDGL LPEDTYIVGY BACU010873/1-781 YQGDAFHQAD THIFIIMGAS GDLAKKKIYP TIWWLFRDGL LPEDTYIVGY 101 150 ENSP00000377192/1-545 ARSRLTVADI RKQSEPFFKA TPEEKLKLED FFARNSYVAG QYDDAASYQR ENSBTAP00000025996/1-515 ARSRLTVADI RKQSEPFFKA TPEEKSKLEE FFARNSYVAG QYDDTASYKR ENSTTRP00000006647/1-552 ARSRLTVADI RKQSEPFFKA APEEKPKLEE FFARNSYVAG QYNDAASYER bmy_21779T0/1-485 ARSRLTVADI RKQSEPFFKA APEEKPKLEE FFARNSYVAG QYDDAASYER BACU010873/1-781 ARSRLTVADI REQSEPFFKA APEEKPKLEE FFARNSYVAG QYDDAASYER 151 200 ENSP00000377192/1-545 LNSHMNALHL GSQANRLFYL ALPPTVYEAV TKNIHESCMS QIGWNRIIVE ENSBTAP00000025996/1-515 LNSHINALHQ GTQTNRLFYL ALPPTVYEAV TKNIHETCMS QTGWNRIIVE ENSTTRP00000006647/1-552 LNSHMNALHQ GPQANRLFYL ALPPTVYEAV TKNIHETCMS QTGWNRIIVE bmy_21779T0/1-485 LNSHMNALHQ GPQANRLFYL ALPPTVYEAV TKNIHETCMS QTGWNRIIVE BACU010873/1-781 LNSHMNALHQ GPQANRLFYL ALPPTVYEAV TKNIHETCMS QTGWNRIIVE 201 250 ENSP00000377192/1-545 KPFGRDLQSS DRLSNHISSL FREDQIYRID HYLGKEMVQN LMVLRFANRI ENSBTAP00000025996/1-515 KPFGRDLQSS NQLSNHIASL FHEDQIYRID HYLGKEMVQN LMVLRFANRI ENSTTRP00000006647/1-552 KPFGRDLESS NRLSNHIASL FREDQIYRID HYLGKEMVQN LMVLRFANRI bmy_21779T0/1-485 KPFGRDLQSS DRLSNHIASL FREDQIYRID HYLGKEMVQN LMVLRFANRI BACU010873/1-781 KPFGRDLQSS DRLSNHIASL FREDQIYRID HYLGKEMVQN LMVLRFANRI 251 300 ENSP00000377192/1-545 FGPIWNRDNI ACVILTFKEP FGTEGRGGYF DEFGII---- ---------- ENSBTAP00000025996/1-515 FGPIWNRDNI ACVILTFKEP FGTEGRGGYF DEFGII---- ---------- ENSTTRP00000006647/1-552 FGPIWNRDNI ACVILTFKEP FGTEGRGGYF DEFGIIRGPG RHGGSGNSPV bmy_21779T0/1-485 FGPIWNRDNI ACVILTFKEP FGTEGRGGYF DEFGII---- ---------- BACU010873/1-781 FGPIWNRDNI ACIILTFKEP FGTEGRGGYF DEFGII---- ---------- 301 350 ENSP00000377192/1-545 ---------- ---------- ---RDVMQNH LLQMLCLVAM EKPASTNSDD ENSBTAP00000025996/1-515 ---------- ---------- ---RDVMQNH LLQMLCLVAM EKPASTDSDD ENSTTRP00000006647/1-552 GPEPPEPGQQ GEALAHCPFL PPTRDVMQNH LLQMLCLVAM EKPASTHSDD bmy_21779T0/1-485 ---------- ---------- ---RDVMQNH LLQMLCLVAM EKPASTHSDD BACU010873/1-781 ---------- ---------- ---RDVMQNH LLQMLCLVAM EKPASTHSDD 351 400 ENSP00000377192/1-545 VRDEKVKVLK CISEVQANNV VLGQYVGNPD GEGEATKGYL DDPTVPRGST ENSBTAP00000025996/1-515 VRDEKVKVLK CISEVQASNV VLGQYVGNPD GEGEATKGYL DDPTVPRGST ENSTTRP00000006647/1-552 VRDEKVKVLK CISEVQASNV VLGQYVGNPN GEGEATKGYL DDPTVPRGST bmy_21779T0/1-485 VRDEKVKVLK CISEVQASNV VLGQYVGNPN GEGEATKGYL DDPTVPRGST BACU010873/1-781 VRDEKVKVLK CISEVQASNV VLGQYVGNPN GEGEATKGYL DDPTVPRGST 401 450 ENSP00000377192/1-545 TATFAAVVLY VENERWDGVP FILRCGKALN ERKAEVRLQF HDVAGDIFHQ ENSBTAP00000025996/1-515 TATFAAAVLY VENERWDGVP FILRCGKALN ERKAEVRLQF RDVAGDIFRQ ENSTTRP00000006647/1-552 TATFAAVVLY VENERWDGVP FILRCGKALN ERKAEVRLQF CDVAGDIFRQ bmy_21779T0/1-485 TATFAAVVLY VENERWDGVP FILRCGKALN ERKAEVRLQF RDVAGDIFRQ BACU010873/1-781 TATFAAVVLY VENERWDGVP FILRCGKALN ERKAEVRLQF RDVAGDIFRQ 451 500 ENSP00000377192/1-545 QCKRNELVIR VQPNEAVYTK MMTKKPGMFF NPEESELDLT YGNRYKNVKL ENSBTAP00000025996/1-515 QCKRNELVIR VQPNEAVYTK MMTKKPGMFF NPEESELDLT YGNRYKNVKL ENSTTRP00000006647/1-552 QCKRNELVIR VQPNEAVYTK MMTKKPGMFF NPEESELDLT YGNRYKNVKL bmy_21779T0/1-485 QCKRNELVIR VQPNEAVYTK MMTKKPGMFF NPEESELDLT YGNRYKNVKL BACU010873/1-781 QCKRNELVIR VQPNEAVYTK MMTKKPGMFF NPEESELDLT YGNRYKNVKL 501 550 ENSP00000377192/1-545 PDAYERLILD VFCGSQMHFV RSDELREAWR IFTPLLHQIE LEKPKPIPYI ENSBTAP00000025996/1-515 PDAYERLILD VFCGSQMHFV RSDELREAWR IFTPLLHHIE REKARPIPYV ENSTTRP00000006647/1-552 PDAYERLILD VFCGSQMHFV RSDELREAWR IFTPLLHQIE LEKAQPIPYV bmy_21779T0/1-485 PDAYERLILD VFCGSQMHFV RR-------- ---------- ---------- BACU010873/1-781 PDAYERLILD VFCGSQMHFV RSDELREAWR IFTPLLHQIE REKAQPIPYV 551 600 ENSP00000377192/1-545 YGSR------ ---------- ---------- ---------- ---------- ENSBTAP00000025996/1-515 YGSR------ ---------- ---------- ---------- ---------- ENSTTRP00000006647/1-552 YGSR------ ---------- ---------- ---------- ---------- bmy_21779T0/1-485 ---------- ---------- ---------- ---------- ---------- BACU010873/1-781 YGSSALTEHR GQQQPAVESL PSAWVLSARS TNAAPDGCPT PAGEVDMRLA 601 650 ENSP00000377192/1-545 GPT------- ---------- ---------- ---------- ---------- ENSBTAP00000025996/1-515 GPV------- ---------- ---------- ---------- ---------- ENSTTRP00000006647/1-552 GPV------- ---------- ---------- ---------- ---------- bmy_21779T0/1-485 ---------- ---------- ---------- ---------- ---------- BACU010873/1-781 GPLRIVALVI TVGLTWLVAS ILLGGPGGGF PRIQQLFAEP RARKYKCGLP 651 700 ENSP00000377192/1-545 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025996/1-515 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006647/1-552 ---------- ---------- ---------- ---------- ---------- bmy_21779T0/1-485 ---------- ---------- ---------- ---------- ---------- BACU010873/1-781 QPCPEEHLAF RMVSGAANVI GPKICLEDRM LMSSVKDNVG RGLNIALVNG 701 750 ENSP00000377192/1-545 ---------- ------EADE LMKRVGFQYE GTYKWVNPHK L--------- ENSBTAP00000025996/1-515 ---------- ------EADE LMKRVGFQYE GTYKWVNPHK L--------- ENSTTRP00000006647/1-552 ---------- ------EADE LMKRVGFQYE GTYKWVNPHK L--------- bmy_21779T0/1-485 ---------- ---------- ---------- ---------- ---------- BACU010873/1-781 VSGELIEARA FDMWAGDVND LLKFIRPLHE GTLVFVASYD DPATKMNEET 751 800 ENSP00000377192/1-545 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025996/1-515 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006647/1-552 ---------- ---------- ---------- ---------- ---------- bmy_21779T0/1-485 ---------- ---------- ---------- ---------- ---------- BACU010873/1-781 RKLFSDLGSK NVKDLAFRDS WVFVGAKGVQ NKSPFEQHVK NSKHTNKYEG 801 850 ENSP00000377192/1-545 ---------- -------- ENSBTAP00000025996/1-515 ---------- -------- ENSTTRP00000006647/1-552 ---------- -------- bmy_21779T0/1-485 ---------- -------- BACU010873/1-781 WPEALEMEGC IPRRTTAS