KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:47 2014 Check: 00 .. Name: ENSP00000318373/1-541 Len: 573 Check: 9861 Weight: 1.00 Name: ENSBTAP00000025999/1-542 Len: 573 Check: 3182 Weight: 1.00 Name: ENSTTRP00000011879/1-451 Len: 573 Check: 2095 Weight: 1.00 Name: bmy_01086T0/1-541 Len: 573 Check: 8930 Weight: 1.00 Name: BACU014554/1-571 Len: 573 Check: 6004 Weight: 1.00 // 1 50 ENSP00000318373/1-541 MPRRKQSHPQ PVKCEGVKVD TEDSLDEGPG ALVLESDLLL GQDLEF--EE ENSBTAP00000025999/1-542 MPRRKQSHPQ PVKCEGVKVD TEDSLDEGPG ALVLESDLLL GQDLEFEEEE ENSTTRP00000011879/1-451 MPRRKQSHPQ PVKCEGVKVD TEDSLDEGPG ALVLESDLLL GQDLEF--EE bmy_01086T0/1-541 MPRRKQSHPQ PVKCEGVKVD TEDSLDEGPG ALVLESDLLL GQDLEF--EE BACU014554/1-571 MPRRKQSHPQ PVKCEGVKVD TEDSLDEGPG ALVLESDLLL GQDLEF--EE 51 100 ENSP00000318373/1-541 EEEEEEGDGN SDQLMGFERD SEGDSLGARP GLPYGLSDDE SGGGRALSAE ENSBTAP00000025999/1-542 EEEEEEGDRN SDQLMGFERD SEGDSLGARP GLPYGLSDDE SGGGRALSAE ENSTTRP00000011879/1-451 EEEEEEGDGN SDQLMGFERD SEGDSLGARP GLPYGLSDDE SGGGRALSAE bmy_01086T0/1-541 EEEEEEGDGN SDQLMGFERD SEGDSLGARP GLPYGLSDDE SGGGRALSAE BACU014554/1-571 EEEEEEGDGN SDQLMGFERD SEGDSLGARP GLPYGLSDDE SGGGRALSAE 101 150 ENSP00000318373/1-541 SEVEEPARGP GEARGERPGP ACQLCGGPTG EGPCCGAGGP GGGPLLPPRL ENSBTAP00000025999/1-542 SEVEEPTRGP GEARGERPGP ACQLCGGPTG EGPCCGAG-P GGGPPLPPRL ENSTTRP00000011879/1-451 SEVEEPARGP GEARGERPGP ACQLCGGPTG EGPCCGAGGP GGGPPLPPRL bmy_01086T0/1-541 SEVEEPARGP GEARGERPGP ACQLCGGPTG EGPCCGAGGP GGGPPLPPRL BACU014554/1-571 SEVEEPARGP GEARGERPGP ACQLCGGPTG EGPCCGAGGP GGGPPLPPRL 151 200 ENSP00000318373/1-541 LYSCRLCTFV SHYSSHLKRH MQTHSGEKPF RCGRCPYASA QLVNLTRHTR ENSBTAP00000025999/1-542 LYSCRLCAFV SHYSSHLKRH MQTHSGEKPF RCGRCPYASA QLVNLTRHTR ENSTTRP00000011879/1-451 LYSCRLCAFV SHYSSHLKRH MQTHSGEKPF RCGRCPYASA QLVNLTRHTR bmy_01086T0/1-541 LYSCRLCAFV SHYSSHLKRH MQTHSGEKPF RCGRCPYASA QLVNLTRHTR BACU014554/1-571 LYSCRLCAFV SHYSSHLKRH MQTHSGEKPF RCGRCPYASA QLVNLTRHTR 201 250 ENSP00000318373/1-541 THTGEKPYRC PHCPFACSSL GNLRRHQRTH AGPPTPPCPT CGFRCCTPRP ENSBTAP00000025999/1-542 THTGEKPYRC PHCPFACSSL GNLRRHQRTH AGPPTPPCPT CGFRCCAPRP ENSTTRP00000011879/1-451 THTGEKPYRC PHCPFACSSL GNLRRHQRTH AGPPTPPCPT CGFRCCAPRP bmy_01086T0/1-541 THTGEKPYRC PHCPFACSSL GNLRRHQRTH AGPPTPPCPT CGFRCCAPRP BACU014554/1-571 THTGEKPYRC PHCPFACSSL GNLRRHQRTH AGPPTPPCPT CGFRCCAPRP 251 300 ENSP00000318373/1-541 ARPPSPTEQE GAVPRRPE-- ---------- ---------- --------DA ENSBTAP00000025999/1-542 ARPPSPTEQE GAVPRRPE-- ---------- ---------- --------DA ENSTTRP00000011879/1-451 ARPPSPTEQE GAVPRRPE-- ---------- ---------- --------DA bmy_01086T0/1-541 ARPPSPTEQE GAVPRRPE-- ---------- ---------- --------DA BACU014554/1-571 ARPPSPTEQE GAVPRRPEGK KPGTKEPRTW VGGLRGTWIH SPGFIVSTDA 301 350 ENSP00000318373/1-541 LLLPDLSLHV PPGGASFLPD CGQLRGEGEG LCGTGSEPLP ELLFPWTCRG ENSBTAP00000025999/1-542 LLLPDLSLHV SPGGASFLPD CGQLRGEGEG LCGTGSEPLP ELLFPWTCRN ENSTTRP00000011879/1-451 LLLPDLSLHV PPGGASFLPD CGQLRSEGEG LCGTGSEPLP ELLFPWTCRN bmy_01086T0/1-541 LLLPDLSLHV PPGGASFLPD CGQLRGEGEG LCGTGSEPLP ELLFPWTCRN BACU014554/1-571 LLLPDLSLHV PPGGASFLPD CGQLRGEGEG LCGTGSEPLP ELLFPWTCRN 351 400 ENSP00000318373/1-541 CGQELEEGEG SRLGAAMCGR CMRGEAGGGA SGGPQGPSDK GFACSLCPFA ENSBTAP00000025999/1-542 CGQELEEGEG SRLGAATCGR CMRGETGGSA SGGPQGPSDK GFACSLCPFA ENSTTRP00000011879/1-451 CGQELEEGEG SRLGAATCGR CMRGETGSGA SGGPQGPSDK GFACSLCPFA bmy_01086T0/1-541 CGQELEEGEG SRLGAAMCGR CMRGETGSGA SGGPQGPSDK GFACSLCPFA BACU014554/1-571 CGQELEEGEG SRLGAAMCGR CMRGETGSGA SGGPQGPSDK GFACSLCPFA 401 450 ENSP00000318373/1-541 THYPNHLARH MKTHSGEKPF RCARCPYASA HLDNLKRHQR VHTGEKPYKC ENSBTAP00000025999/1-542 THYPNHLARH MKTHSGEKPF RCARCPYASA HLDNLKRHQR VHTGEKPYKC ENSTTRP00000011879/1-451 THYPNHLARH MKTHSGEKPF RCARCPYASA HLDNLKRHQR VHTGEKPYKC bmy_01086T0/1-541 THYPNHLARH MKTHSGEKPF RCARCPYASA HLDNLKRHQR VHTGEKPYKC BACU014554/1-571 THYPNHLARH MKTHSGEKPF RCARCPYASA HLDNLKRHQR VHTGEKPYKC 451 500 ENSP00000318373/1-541 PLCPYACGNL ANLKRHGRIH SGDKPFRCSL CNYSCNQSMN LKRHMLRHTG ENSBTAP00000025999/1-542 PLCPYACGNL ANLKRHGRIH SGDKPFRCSL CNYSCNQSMN LKRHMLRHTG ENSTTRP00000011879/1-451 PLCPYACGNL ANLKRHGRIH SGDKPFRCSL CNY------- ---------- bmy_01086T0/1-541 PLCPYACGNL ANLKRHGRIH SGDKPFRCSL CNYSCNQSMN LKRHMLRHTG BACU014554/1-571 PLCPYACGNL ANLKRHGRIH SGDKPFRCSL CNYSCNQSMN LKRHMLRHTG 501 550 ENSP00000318373/1-541 EKPFRCATCA YTTGHWDNYK RHQKVHGHGG AGGPGLSASE GWAPPHSPPS ENSBTAP00000025999/1-542 EKPFRCATCA YTTGHWDNYK RHQKVHGHGG AGGPGLSASE GWAPPHSPPP ENSTTRP00000011879/1-451 ---------- ---------- ---------- ---------- ---------- bmy_01086T0/1-541 EKPFRCATCA YTTGHWDNYK RHQKVHGHGG AGGPGLSASE GWAPPHSPPS BACU014554/1-571 EKPFRCATCA YTTGHWDNYK RHQKVHGHGG AGGPGLSASE GWAPPHSPPS 551 600 ENSP00000318373/1-541 VLSSRGPPAL GTAGSRAVHT DSS ENSBTAP00000025999/1-542 VLSSRGPTAL GATSSRALHT DSP ENSTTRP00000011879/1-451 ---------- ---------- --- bmy_01086T0/1-541 VLSSRGPTAL GATGSRALHT DSP BACU014554/1-571 VLSSRGPTAL AATGSRALHT DSP