KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:27:50 2014  Check: 00 ..

 Name: ENSP00000251607/1-434     Len:    434  Check:  5246  Weight:  1.00
 Name: bmy_16204T0/1-431         Len:    434  Check:  9298  Weight:  1.00
 Name: BACU019360/1-434          Len:    434  Check:  4703  Weight:  1.00
 Name: ENSTTRP00000007375/1-434  Len:    434  Check:  6101  Weight:  1.00
 Name: ENSBTAP00000026029/1-434  Len:    434  Check:  6467  Weight:  1.00

//


                          1                                                   50
ENSP00000251607/1-434     MLRCLYHWHR PVLNRRWSRL CLPKQYLFTM KLQSPEFQSL FTEGLKSLTE 
bmy_16204T0/1-431         ---MTAQRGR QLLSCSWSRL CLLKHSLFTM KLQSPEFQTL FTEGLKSLTE 
BACU019360/1-434          MLRCLDPWRR QLLGCSWSRL CLLKHSLFTM KLQSPEFQSL FTEGLKSLTE 
ENSTTRP00000007375/1-434  MLRCLGPWRR QLLSCSWSRL FLLKHSLFTM KLQSPEFQSL FTEGLKSLTE 
ENSBTAP00000026029/1-434  MLRCLDPWRR QLLSCSWSRL CLLKHSMFTM KLQSPEFQSL FTEGLKSLTE 


                          51                                                 100
ENSP00000251607/1-434     LFVKENHELR IAGGAVRDLL NGVKPQDIDF ATTATPTQMK EMFQSAGIRM 
bmy_16204T0/1-431         LFIKENHELR IAGGAVRDLL SGVKPQDVDF ATTATPAQMK ELFQSVGVRM 
BACU019360/1-434          LFIKENHELR IAGGAVRDLL SGVKPQDVDF ATTATPAQMK ELFQSVGVRM 
ENSTTRP00000007375/1-434  LFVKENHELR IAGGAVRDLL SGVKPQDVDF ATTATPAQMK ELFQSVGIRM 
ENSBTAP00000026029/1-434  LFVRENHELR IAGGAVRDLL SGVKPQDVDF ATTATPAQMK ELFQSVGIRM 


                          101                                                150
ENSP00000251607/1-434     INNRGEKHGT ITARLHEENF EITTLRIDVT TDGRHAEVEF TTDWQKDAER 
bmy_16204T0/1-431         INNKGEKHGT ITARLHEENF EITTLRIDVA TDGRHAEVEF TTDWQKDAER 
BACU019360/1-434          INNKGEKHGT ITARLHEENF EITTLRIDVA TDGRHAEVEF TTDWQKDAER 
ENSTTRP00000007375/1-434  INNKGEKHGT ITARLHEENF EITTLRIDVA TDGRHAEVEF TTDWQKDAER 
ENSBTAP00000026029/1-434  INNKGEKHGT ITARLHEENF EITTLRIDVA TDGRHAEVEF TTDWQKDAER 


                          151                                                200
ENSP00000251607/1-434     RDLTINSMFL GFDGTLFDYF NGYEDLKNKK VRFVGHAKQR IQEDYLRILR 
bmy_16204T0/1-431         RDLTINSMFL GFDGTLFDYF NGYEDLKNKK VRFVGEAKQR IQEDYLRILR 
BACU019360/1-434          RDLTINSMFL GFDGTLFDYF NGYEDLKNKK VRFVGQAKQR IQEDYLRILR 
ENSTTRP00000007375/1-434  RDLTINSMFL GFDGTLFDYF NGYEDLKNKK VRFVGQAKQR IQEDYLRILR 
ENSBTAP00000026029/1-434  RDLTINSMFL GFDGTLFDYF NGYEDLKNKK VRFVGQAKQR IQEDYLRILR 


                          201                                                250
ENSP00000251607/1-434     YFRFYGRIVD KPGDHDPETL EAIAENAKGL AGISGERIWV ELKKILVGNH 
bmy_16204T0/1-431         YFRFYGKIVD TPGDHDPETL EAIAENAKGL AGISGERIWV ELKKILTSNH 
BACU019360/1-434          YFRFYGKIVD TPGDHDPETL EAIAENAKGL AGISGERIWV ELKKILTGNH 
ENSTTRP00000007375/1-434  YFRFYGKIVD TPGDHDPETL EAIAENAKGL AGISGERIWV ELKKILTSNH 
ENSBTAP00000026029/1-434  YFRFYGKIVD TPGDHDPETL EAIAENAKGL AGVSGERIWV ELKKILTGDH 


                          251                                                300
ENSP00000251607/1-434     VNHLIHLIYD LDVAPYIGLP ANASLEEFDK VSKNVDGFSP KPVTLLASLF 
bmy_16204T0/1-431         VNHLIHLIYD LDVAPYIGLP ANASLEEFNK VSKNVEGFSP KPMTLLTSLF 
BACU019360/1-434          AHHLIHLIYD LDVAPHVGLP ANASLEEFNK VSKNVEGFSP KPMTLLTSLF 
ENSTTRP00000007375/1-434  VNHLIHLIYD LGVAPYIGLP ASASLEEFNK VSKNVEGFSP KPMTLLTSLF 
ENSBTAP00000026029/1-434  VNHLIHLIYE LDVAPYIGLP ANASLEEFNK VSKNVEGFSP KPMTLLTSLF 


                          301                                                350
ENSP00000251607/1-434     KVQDDVTKLD LRLKIAKEEK NLGLFIVKNR KDLIKATDSS DPLKPYQDFI 
bmy_16204T0/1-431         KVQDDVTKLD LRLKISKEEK NLGLFIVKNR KDLIKATDSS EPLKPYQDFI 
BACU019360/1-434          KVQDDVTKLD LRLKISKEEK NLGLFIVKNR KDLIKATDSS EPLRPYQDFI 
ENSTTRP00000007375/1-434  KVQDDVTKLD LRLKISKEEK NLGLFIVKNR KDLIKATDSS EPLKPYQDFI 
ENSBTAP00000026029/1-434  KVQDDVTKLD LRLKISKEEK NLGLFIVKNR KDLIKAVDSS EPLKPYQDFI 


                          351                                                400
ENSP00000251607/1-434     IDSREPDATT RVCELLKYQG EHCLLKEMQQ WSIPPFPVSG HDIRKVGISS 
bmy_16204T0/1-431         IDSRESDATA RVCELLKYQG EHGLLKEMQQ WSIPPFPVSG HDIRKVGISS 
BACU019360/1-434          IDSRESDATA RVCELLKYQG EHGLLKEMQQ WSIPPFPVSG HDIRKVGISS 
ENSTTRP00000007375/1-434  IDSRDSDATA RVCELLKYQG EHGLLKEMQQ WSIPPFPVSG HDIRKVGISS 
ENSBTAP00000026029/1-434  IDSREADATA RVCELLKYQG EHGLLKQMQQ WSIPPFPVSG HDIRKVGISS 


                          401                                                450
ENSP00000251607/1-434     GKEIGALLQQ LREQWKKSGY QMEKDELLSY IKKT 
bmy_16204T0/1-431         GKEIGALLQQ LREQWKKSGY QMEKDELLSY IKKT 
BACU019360/1-434          GKEIGALLQQ LREQWKKSGY QMEKDELLSY IKKT 
ENSTTRP00000007375/1-434  GKEIGVLLQQ LREHCKKSGY QMEKDELLSY IKKT 
ENSBTAP00000026029/1-434  GKEIGVLLQQ LREQWKKSGY QLEKDELLSY IKKT