KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:50 2014 Check: 00 .. Name: ENSP00000231948/1-442 Len: 543 Check: 907 Weight: 1.00 Name: ENSBTAP00000026031/1-444 Len: 543 Check: 7990 Weight: 1.00 Name: ENSTTRP00000007395/1-421 Len: 543 Check: 7718 Weight: 1.00 Name: bmy_16205T0/1-543 Len: 543 Check: 1247 Weight: 1.00 Name: BACU015135/1-480 Len: 543 Check: 2021 Weight: 1.00 // 1 50 ENSP00000231948/1-442 ---------- ---------- ---MAGEGDQ QDAAHNMG-N HLPLL----- ENSBTAP00000026031/1-444 ---------- ---------- ---MAGEGDP EDAAHNMG-N HLPLL----- ENSTTRP00000007395/1-421 ---------- ---------- ---------- ---------- ---------- bmy_16205T0/1-543 MPKCTSRDNG FQTQRLKGSW LTWGAGHSAG TTSGEDPGRS ELPCLGARCL BACU015135/1-480 MPKCTSRDNG FQTQHLKGSW LTRGAGHSAG TTSGEDPGRS ELPCLGARCL 51 100 ENSP00000231948/1-442 -------PAE SEEEDE--ME VEDQDSKEAK KPNIINFDTS LPTSHTYLGA ENSBTAP00000026031/1-444 -------PAE EEEEDEIEME VEDQDNKEPK KPNIINFDTS LPTSHTYLGS ENSTTRP00000007395/1-421 ---------E DEEEDEIEME VEDQDSKEPK RPNIINFDTS LPTSHTYLGS bmy_16205T0/1-543 QCKETSAAAE DEEEDEIEME VEDQDSKEPK KPNIINFDTS LPTSHTYLGS BACU015135/1-480 QCKETYAAAE DEEEDEIEME VEDQDSKEPK KPNIINFDTS LPTSHTYLGS 101 150 ENSP00000231948/1-442 DMEEFHGRTL HDDDSCQVIP VLPQVMMILI PGQTLPLQLF HPQEVSMVRN ENSBTAP00000026031/1-444 DMEEFHGRTL HDDDSCPVIP VLPQVVMTLI PGQTLPLQLF SPQEVSMVRN ENSTTRP00000007395/1-421 DMEEFHGRTL HDDDSCPVIP VLPQVLMILI PGQTLPLQLF SPQEVSMVRN bmy_16205T0/1-543 DMEEFHGRTL HDDDSCPVIP VLPQVMMILI PGQTLPLQLF SPQEVSMVRN BACU015135/1-480 DMEEFHGRTL HDDDSCPVIP VLPQVMMILI PGQTLPLQLF SPQEVSMVRN 151 200 ENSP00000231948/1-442 LIQKDRTFAV LAYSNVQERE AQFGTTAEIY AYREEQDFGI EIVKVKAIGR ENSBTAP00000026031/1-444 LIQKDRTFAV LAYSNVQERE AQFGTTAEIY AYREEQDFGI EVVKVKAIGR ENSTTRP00000007395/1-421 LIQKDRTFAV LAYSNVQERE AQFGTTAEIY AYREEQDFGI EIVKVKAIGR bmy_16205T0/1-543 LIQKDRTFAV LAYSNVQERE AQFGTTAEIY AYREEQDFGI EIVKVKAIGR BACU015135/1-480 LIQKDRTFAV LAYSNVQERE AQFGTTAEIY AYREEQDFGI EIVKVKAIGR 201 250 ENSP00000231948/1-442 QRFKVLELRT QSDGIQQAKV QILPECVLPS TMSAVQLESL NKCQIFPSKP ENSBTAP00000026031/1-444 QRFKVLEIRT QSDGIQQAKV QILPECVLPS TMSAVQLESL NKCRIFPSKP ENSTTRP00000007395/1-421 QRFKVLELRT QSDGIQQAKV QILPECVLPS TMSAVQLESL NKCQMVPSKP bmy_16205T0/1-543 QRFKVLELRT QSDGIQQAKV QILPECVLPS TMSAVQLESL NKCQIVPSKP BACU015135/1-480 QRFKVLELRT QSDGIQQAKV QILPECVLPS TMSAVQLESL NKCQIVPSKP 251 300 ENSP00000231948/1-442 VSREDQCSYK WWQKYQKRKF HCANLTSWPR WLYSLYDAET LMDRIKKQLR ENSBTAP00000026031/1-444 VSWEDQCSYK WWQKYQKRKF HCANLTSWPR WLYSLYDAET LMDRIKKQLR ENSTTRP00000007395/1-421 VSCEDQCSHK WWQKYQKRKF HCANLTSWPR WLYSLYDAET LMERIKRQLH bmy_16205T0/1-543 VSREDQCSYK WWQKYQKRKF HCANLTSWPR WLYSLYDAET LMERIKRQLH BACU015135/1-480 VSREDQCSYK WWQKYQKRKF HCANLTSWPR WLYSLYDAET LMERIKRQLH 301 350 ENSP00000231948/1-442 EWDENLKDDS LPSNPI---- ---------- ---------- ---------- ENSBTAP00000026031/1-444 EWDENLKEDS LPSNPI---- ---------- ---------- ---------- ENSTTRP00000007395/1-421 EWDENLKEDS LPSNPI---- ---------- ---------- ---------- bmy_16205T0/1-543 EWDENLKEDS LPSNPIGMKN QFPSCDLILK SIPTSFALSN YQKKMSKVFI BACU015135/1-480 EWDENLKEDS LPSNPI---- ---------- ---------- ---------- 351 400 ENSP00000231948/1-442 ---------- ---------- ---------D FSYRVAACLP IDDVLRIQLL ENSBTAP00000026031/1-444 ---------- ---------- ---------D FSYRVAACLP IDDVLRIQLL ENSTTRP00000007395/1-421 ---------- ---------- ---------D FSYRVAACLP IDDVLRIQLL bmy_16205T0/1-543 KSSSCNKWLA SKNTECKDSP FPGLQGATKN FSYRVAACLP IDDVLRIQLL BACU015135/1-480 ---------- ---------- ---------D FSYRVAACLP IDDVLRIQLL 401 450 ENSP00000231948/1-442 KIGSAIQRLR CELDIMNKCT SLCCKQCQET EITTKNEIFS LSLCGPMAAY ENSBTAP00000026031/1-444 KIGSAIQRLR CELDIMNKCT SLCCKQCQET EITTKNEIFS LSLCGPMAAY ENSTTRP00000007395/1-421 KIGSAIQRLR CELDIMNKCT SLCCKQCQET EITTKNEIFS LSLCGPMAAY bmy_16205T0/1-543 KIGSAIQRLR CELDIMNKCT SLCCKQCQET EITTKNEIFS LSLCGPMAAY BACU015135/1-480 KIGSAIQRLR CELDIMNKCT SLCCKQCQET EITTKNEIFS LSLCGPMAAY 451 500 ENSP00000231948/1-442 VNPHGYVHET LTVYKACNLN LIGRPSTEHS WFPGYAWTVA QCKICASHIG ENSBTAP00000026031/1-444 VNPHGYVHET LTVYKASNLN LIGRPSTDHS WFPGYAWTIA QCRICASHIG ENSTTRP00000007395/1-421 VNPHGYVHET LTVYKACNLN LIGRPSTEHS WFPGFAWTIA QCRICASHIG bmy_16205T0/1-543 VNPHGYVHET LTVYKACNLN LIGRPSTEHS WFPGFAWTIA QCRICASHVG BACU015135/1-480 VNPHGYVHET LTVYKACNLN LIGRPSTEHS WFPGFAWTIA QCRICASHIG 501 550 ENSP00000231948/1-442 WKFTATKKDM SPQKFWGLTR SALLPTIPDT EDEISPDKVI LCL ENSBTAP00000026031/1-444 WKFTATKKDM SPQKFWGLTR SALLPTIPDT EDDISPDKVI LCL ENSTTRP00000007395/1-421 WKFTATKKDM SPQKFWGLTR SALLPTIPDT EDDISPDKII LCL bmy_16205T0/1-543 WKFTATKKDM LPQKFWGLTR SALLPTIPDT EDDISPDKII LCL BACU015135/1-480 WKFTATKKDM LPQKFWGLTR SALLPTIPDT EDDISPDKII LCL