KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:51 2014 Check: 00 .. Name: BACU015222/1-356 Len: 412 Check: 8534 Weight: 1.00 Name: ENSP00000354583/1-409 Len: 412 Check: 6897 Weight: 1.00 Name: ENSBTAP00000026034/1-400 Len: 412 Check: 7469 Weight: 1.00 Name: bmy_18008T0/1-304 Len: 412 Check: 8780 Weight: 1.00 Name: ENSTTRP00000009900/1-406 Len: 412 Check: 3178 Weight: 1.00 // 1 50 BACU015222/1-356 MDGVARPLPG CFLPSVPLLI LVSTLATATS VANSTLNGTD MVVGSVPVVI ENSP00000354583/1-409 MDRLKSHLTV CFLPSVPFLI LVSTLATAKS VTNSTLNGTN VVLGSVPVII ENSBTAP00000026034/1-400 MDGVKRHLPV CFLPPVPLLI LVSTLATASS VTSSTLNGTN VAVGLAPVVV bmy_18008T0/1-304 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009900/1-406 MDGVTRPLPV CLLPSASLLI LVSTLATAKS VANSTLNGTD TVVGSVPVVI 51 100 BACU015222/1-356 ARTDHIIVKE GNSALINCSV YGLPEPQLKW YNSVGKLLH- -EDTENRGAG ENSP00000354583/1-409 ARTDHIIVKE GNSALINCSV YGIPDPQFKW YNSIGKLLKE EEDEKERGGG ENSBTAP00000026034/1-400 ARTDHIIVKE GNSALINCSV SGLPEPQFKW YNSAGKLLS- -ENEEDQGGG bmy_18008T0/1-304 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009900/1-406 ARTDHIIVKE GNSALINCSV YGLPEPQLKW YNSVGKLLH- -EDSKDRGAG 101 150 BACU015222/1-356 KWQMHD-GLL NITKVSFTDR GRYTCVAANI HGTVNNTVTL RVVFTSGDMG ENSP00000354583/1-409 KWQMHDSGLL NITKVSFSDR GKYTCVASNI YGTVNNTVTL RVIFTSGDMG ENSBTAP00000026034/1-400 KWQMHD-GLL NITKVSFSDR GRYTCMASNV HGSVNNTVTL RVVFTSGDMG bmy_18008T0/1-304 ---MHD-GLL NITKVSFTDR GRYTCVAANI HGTVNNTVTL RVVFTSGDMG ENSTTRP00000009900/1-406 KWQMHD-GLL NITKVSFTDR GRYTCVAANV HGTVNNTVTL RVVFTSGDMG 151 200 BACU015222/1-356 VYYMVVCLVA FAVVLVLNIT RLCMMNSHLK KTEKAINEFF RTEGAEKLQK ENSP00000354583/1-409 VYYMVVCLVA FTIVMVLNIT RLCMMSSHLK KTEKAINEFF RTEGAEKLQK ENSBTAP00000026034/1-400 VYYMVVCLVA FAVVLVLNVT RLCMMSSHLK KTEKAINEFF RTEGAEKLQK bmy_18008T0/1-304 VYYMVVCLVA FAVVLVLNIT RLCMMSSHLK KTEKAINEFF RTEGAEKLQK ENSTTRP00000009900/1-406 VYYMVVCLVA FTVVLALNIT RLCMMSSHLK KTEKAINEFF RTEGAEKLQK 201 250 BACU015222/1-356 AFEIAKRIPI ITSAKTLELA KVTQFKTMEF ARYIEELARS VPLPPLIMNC ENSP00000354583/1-409 AFEIAKRIPI ITSAKTLELA KVTQFKTMEF ARYIEELARS VPLPPLIMNC ENSBTAP00000026034/1-400 AFEIAKRIPI ITSAKTLELA KVTQFKTMEF ARYIEELARS VPLPPLIMNC bmy_18008T0/1-304 AFEIAKRIPI ITSAKTLELA KVTQFKTMEF ARYIEELARS VPLPPLIMNC ENSTTRP00000009900/1-406 AFEIAKRIPI ITSAKTLELA KVTQFKTMEF ARYIEELARS VPLPPLIMNC 251 300 BACU015222/1-356 RTIVEELMEV VGLEEQG-QH FVRPAPEGQE --AATGAEVY TIPAALQRSE ENSP00000354583/1-409 RTIMEEIMEV VGLEEQG-QN FVRHTPEGQE --AADRDEVY TIPNSLKRSD ENSBTAP00000026034/1-400 RTIVEELMEV VGLDEHGHQN FVRHTPEGQE AAAADGDEVY TIPDA----- bmy_18008T0/1-304 RTIVEELMEV VGLEEQG-QN FVRPAPEGQE --ATTGDEVY TIPDALQRSE ENSTTRP00000009900/1-406 RTIVEELMEV VGLEEQG-QN FVRHAPEGQE --ATSGDEVY TIPDALQRSE 301 350 BACU015222/1-356 FWNSAF-FMG LNQRSLVMHI WFSHMPLTKA HY-------- ---------- ENSP00000354583/1-409 SPAADSDASS LHEQPQQIAI KVSVHPQSKK EHADDQEGGQ FEVKDVEETE ENSBTAP00000026034/1-400 ----DSDASS LHEQPQQIAI EVSVHPPAHR EPSDDRAAGA LEAGDEEDTE bmy_18008T0/1-304 SPTADSDASS LHEQPQQIAI EVSVHPQAQR EPTDDRDGGP LEARD-EDTE ENSTTRP00000009900/1-406 SPTADSDASS LHEQPQQIAI EVSVHPQARR EPTDDRDGGP LEARDEEDTE 351 400 BACU015222/1-356 ---------- -----VAKSK VCGVGDIWSS SRDRSLPP-- --EEELASLC ENSP00000354583/1-409 LSAEHSPETA EPSTDVTSTE LTSEEPTPVE VPDKVLPPAY LEATEPAVTH ENSBTAP00000026034/1-400 PSAEHSPESA APSTEVTSAA LTSEEPTPVE VPDHVLPPGL LEAAEPARPR bmy_18008T0/1-304 PSAEHSPESA APSTEVTSAA LTSEEPTPVE VPDRVLPPGL LEAAEPVGAC ENSTTRP00000009900/1-406 PSAEHSPESA APSTEVTSAA LTSEEPTPVE VPDRVLPPGL LEATEPAGAC 401 450 BACU015222/1-356 ---------- -- ENSP00000354583/1-409 DKNTCIIYES HV ENSBTAP00000026034/1-400 DGSTHVVYES HV bmy_18008T0/1-304 DRNARVVCES HV ENSTTRP00000009900/1-406 DSNARVVYES HV