KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:51 2014 Check: 00 .. Name: ENSTTRP00000004487/1-354 Len: 391 Check: 5332 Weight: 1.00 Name: ENSP00000305682/1-353 Len: 391 Check: 4159 Weight: 1.00 Name: ENSBTAP00000026038/1-335 Len: 391 Check: 5972 Weight: 1.00 Name: bmy_12885T0/1-303 Len: 391 Check: 2932 Weight: 1.00 Name: BACU000099/1-327 Len: 391 Check: 4187 Weight: 1.00 // 1 50 ENSTTRP00000004487/1-354 ---------- ---------- ---------- -------EEA MAVGVWGLRL ENSP00000305682/1-353 ---------- ---------- ---------- -------MEA LAMGSRALRL ENSBTAP00000026038/1-335 ---------- ---------- ---------- ---------- MAVVVRGMRL bmy_12885T0/1-303 PTAWPGTKLS DGTWGARSEF PGEETEKDLR VAVRRAEEEA MSVGVWSLRL BACU000099/1-327 ---------- ---------- ---------- ---------- MSVGVWSLRL 51 100 ENSTTRP00000004487/1-354 WRAGPGGGAG WRFIATSPAS QLSPTELTEM QNDLFNKEKN SQLSLTPRTE ENSP00000305682/1-353 WLVAPGGGIK WRFIATSSAS QLSPTELTEM RNDLFNKEKA RQLSLTPRTE ENSBTAP00000026038/1-335 WRAAPSGGAA WRSVVTSPAS QLSPTELIEM QNDLFNKEKN RQLSLTPRTE bmy_12885T0/1-303 WRAAPSGGAG WRFIATSPAS QLSPTELTEM QNDLFNKEKN RQLSLTPRTE BACU000099/1-327 WRAAPGGGAG WRFIATSPAS QLSPTELTEM QNDLFNKEKK RQLSLTPRTE 101 150 ENSTTRP00000004487/1-354 KIEVKHVGKF DPGTVFVMNK NISTPYSCAM HLSEWYCRKS ILALVDGQPW ENSP00000305682/1-353 KIEVKHVGKT DPGTVFVMNK NISTPYSCAM HLSEWYCRKS ILALVDGQPW ENSBTAP00000026038/1-335 KIEVKHVGKT DPGTIFVLNK NVSTPYSCAM HLSEWYCRKS ILALVDGQPW bmy_12885T0/1-303 KIEVKHVGKA DPGTVFVMNK NISTPYSCAM HLSEWYCRKS ILALVDGQPW BACU000099/1-327 KIEVKHVGKA DPGTVFVMNK NISTPYSCAM HLSEWYCRKS ILALVDGQPW 151 200 ENSTTRP00000004487/1-354 DMYKPLTKSC EIKFLTFKDD DPGEVNKAYW RSCAMIMGCV IERAFKDEYV ENSP00000305682/1-353 DMYKPLTKSC EIKFLTFKDC DPGEVNKAYW RSCAMMMGCV IERAFKDEYM ENSBTAP00000026038/1-335 DMYKPLTKSC EIKFLTFKDD DPGEVNKAYW RSCAMIMGCV IERAFKEEYV bmy_12885T0/1-303 DMYKPLTKSC EIKFLTFKDD DPGEVN---- ---------- ---------- BACU000099/1-327 DMYKPLTKSC EIKFLTFKDD DPGEVNKAYW RSCAMMMGCV IERAFKDEYV 201 250 ENSTTRP00000004487/1-354 VSLVRAPEVP VITGAFCYDV VLDKRLDEWM PTKENLCSFT KDARTLIYKD ENSP00000305682/1-353 VNLVRAPEVP VISGAFCYDV VLDSKLDEWM PTKENLRSFT KDAHALIYKD ENSBTAP00000026038/1-335 VHLVRAPEVP VIAGAFCYDV VLDKRLDEWM PTKENLRSFT KDARALIYKD bmy_12885T0/1-303 ---------- ---------- ---------- --KENLCSFT KDARALIYKD BACU000099/1-327 VSLVRAPEVP VITGAFCYDV VLDKRLDEWM PTKENLCSFT KDARALIYKD 251 300 ENSTTRP00000004487/1-354 LPFETXXXXX XXXXXXXXXX XYKLDFIEEK ASQNPERIVK LHXXXXXXXX ENSP00000305682/1-353 LPFETLEVEA KVALEIFQHS KYKVDFIEEK ASQNPERIVK LHRIGDFIDV ENSBTAP00000026038/1-335 LPFETLEVEA KVALEIFQHN KYKVDFIEEK ASQNPERIVK LHRFGDFIDV bmy_12885T0/1-303 LPFETLEVEA KVALEIFQHN KYKLDFIEEK ASQNPERIVK LHRFGDFIDV BACU000099/1-327 LPFETLEVEA KVALEIFQHN KYKLDFIEEK ASQNPERIVK LHRFGDFIDV 301 350 ENSTTRP00000004487/1-354 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000305682/1-353 SEGPLIPRTS ICFQYEVSAV HNLQPTQPSL IRRFQGVSLP VHLRAHFTIW ENSBTAP00000026038/1-335 SEGPLIPRTS ICFQYEVSVV HNLQATQSSL VRRFQGLSLP VHLRAHFTIW bmy_12885T0/1-303 SEGPLIPRTS ICFQYEVSAV HNLQATQSSL VRRFQGLSLP VHLRV----- BACU000099/1-327 SEGPLIPRTS ICFQYEVSAV HNLQATQSSL VRRFQGLSLP VHLRAHFTIW 351 400 ENSTTRP00000004487/1-354 XXXXXXXXXX TLFPILLLFT SYSFCKTLSK SYLLHVTFSE Y ENSP00000305682/1-353 DKLLERSRKM TPFPILLLFT TQSFFTTSPE SYLLHGTVSE - ENSBTAP00000026038/1-335 NKLLERSRKM V--------- ------TEDQ TKPTEKSAST - bmy_12885T0/1-303 ---------- ---------- ------TEDQ TQPTEESASA - BACU000099/1-327 NKLLERSRKM V--------- ---------- ----FLTTCN -