KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:54 2014 Check: 00 .. Name: ENSTTRP00000005850/1-339 Len: 353 Check: 4185 Weight: 1.00 Name: ENSP00000364486/1-339 Len: 353 Check: 3704 Weight: 1.00 Name: ENSBTAP00000026056/1-339 Len: 353 Check: 4747 Weight: 1.00 Name: bmy_11439T0/1-197 Len: 353 Check: 5835 Weight: 1.00 Name: BACU006701/1-353 Len: 353 Check: 442 Weight: 1.00 // 1 50 ENSTTRP00000005850/1-339 MGDRSPFETD MLTLTRYVME KGRQAKGTGE LTQLLNSMLT AIKAISSAVR ENSP00000364486/1-339 MTDRSPFETD MLTLTRYVME KGRQAKGTGE LTQLLNSMLT AIKAISSAVR ENSBTAP00000026056/1-339 MGDRSPFETD MLTLTRYVME KGRQAKGTGE LTQLLNSMLT AIKAISSAVR bmy_11439T0/1-197 ---------- ---------- ---------- ---------- ---------- BACU006701/1-353 MGDRSPFATD MLTLTRYVME KGRQAKGTGE LTQLLNSMLT AIKAISSAVR 51 100 ENSTTRP00000005850/1-339 KAGLAHLYGI AGSVNVTGDE VKKLDVLSNS LVINMLQSSY STCVLVSEEN ENSP00000364486/1-339 KAGLAHLYGI AGSVNVTGDE VKKLDVLSNS LVINMVQSSY STCVLVSEEN ENSBTAP00000026056/1-339 KAGLANLYGI AGSVNVTGDE VKKLDVLSNA LVINMLQSSY STCVLVSEEN bmy_11439T0/1-197 ---------- ---------- ---------- ---------- ---------- BACU006701/1-353 KAGLAHLYGI AGSVNVTGDE VKKLDVLSNS LVINMLQSSY STCVLVSEEN 101 150 ENSTTRP00000005850/1-339 KDALITAQEK RGKYVVCFDP LDGSSNIDCL ASIGTIFAIY RKTSEDEPSE ENSP00000364486/1-339 KDAIITAKEK RGKYVVCFDP LDGSSNIDCL ASIGTIFAIY RKTSEDEPSE ENSBTAP00000026056/1-339 KEAIITSKEK RGKYVVCFDP LDGSSNIDCL ASIGTIFAIY RKTSEDEPSE bmy_11439T0/1-197 ---------- ---------- ---------- ---------- --TSEDEPSE BACU006701/1-353 KDALITAQEK RGKYVVCFDP LDGSSNIDCL ASIGTIFAIY RKTSEDEPSE 151 200 ENSTTRP00000005850/1-339 KDALQPGRNI VAAGYALYGS ATLVALSTGQ GVDLFMLDPX XXXXXXXXXX ENSP00000364486/1-339 KDALQCGRNI VAAGYALYGS ATLVALSTGQ GVDLFMLDPA LGEFVLVEKD ENSBTAP00000026056/1-339 KDALQPGRNI VAAGYALYGS ATLVALSTGQ GVDLFMLDPA LGEFVLVEKD bmy_11439T0/1-197 KDALQPGRNI VAAGYALYGS ATLVALSTGQ GVDLFMLDPA LGEFVLVEKD BACU006701/1-353 KDALQPGRNI VAAGYALYGS ATLVALSTGQ GVDLFMLDPA LGEFVLVEKD 201 250 ENSTTRP00000005850/1-339 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000364486/1-339 VKIKKKGKIY SLNEGYAKYF DAATTEYVQK KKFPEDGSAP YGARYVGSMV ENSBTAP00000026056/1-339 VKIKKKGKIY SLNEGYAKYF DAATTEYVQK KKFPEDGSAP YGARYVGSMV bmy_11439T0/1-197 VKIKNKGKIY SLNEGYAKYF DAATTEYVQK KKFPEDGSAP YGARYVGSMV BACU006701/1-353 VKIKNKGKIY SLNEGYAKYF DAATTEYVQK KKFPEDGSAP YGARYVGSMV 251 300 ENSTTRP00000005850/1-339 XXXXXXXXXX XXXXXXXXXX XXXXXLRLLY ECNPVAYIIE QAGGMATTGT ENSP00000364486/1-339 ADVHRTLVYG GIFLYPANQK SPKGKLRLLY ECNPVAYIIE QAGGLATTGT ENSBTAP00000026056/1-339 ADVHRTLVYG GIFLYPANQK SPKGKLRLLY ECNPVAYIIE QAGGLATTGT bmy_11439T0/1-197 ADVHRTLVYG GIFLYPANQK NPKGKLRLLY ECNPVAYIIE QAGGMATTGT BACU006701/1-353 ADVHRTLVYG GIFLYPANQK NPKGKLRLLY ECNPVAYIIE QAGGMATTGT 301 350 ENSTTRP00000005850/1-339 QPVLDVKPEA IHQRVPLILG SPDDVQEYLT CVQKNQAGR- ---------- ENSP00000364486/1-339 QPVLDVKPEA IHQRVPLILG SPEDVQEYLT CVQKNQAGS- ---------- ENSBTAP00000026056/1-339 QPVLDVKPEA IHQRVPLILG SPEDVQEYLT CVQKNQAGR- ---------- bmy_11439T0/1-197 QPVLDVKPEA IHQRVPLILG SPDDVQEYLT CVQKNQAGR- ---------- BACU006701/1-353 QPVLDVKPEA IHQRVPLILG SPDDVQEYLT CVQKNQAGRC EEKNTNEKDI 351 400 ENSTTRP00000005850/1-339 --- ENSP00000364486/1-339 --- ENSBTAP00000026056/1-339 --- bmy_11439T0/1-197 --- BACU006701/1-353 EGK