KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:27:56 2014 Check: 00 .. Name: ENSP00000235332/1-388 Len: 395 Check: 2411 Weight: 1.00 Name: bmy_12768T0/1-359 Len: 395 Check: 2373 Weight: 1.00 Name: ENSBTAP00000026058/1-381 Len: 395 Check: 3066 Weight: 1.00 Name: ENSTTRP00000003294/1-376 Len: 395 Check: 5541 Weight: 1.00 // 1 50 ENSP00000235332/1-388 MVEAEELAQL RLLNLELLRQ LWVGQDAVRR SVARAASESS LESSSSYNSE bmy_12768T0/1-359 MVETRDLAQL RQLNLELLRQ LWVGQDAVRR SVAKAASESS LDSSSSYDSE ENSBTAP00000026058/1-381 MVETRDLVQL RQLNLELLRQ LWVRQDAVQR SVAKAASESS LDSSSSYDSE ENSTTRP00000003294/1-376 MVETRDLAQL RQLNLELLRQ LWVGQDAVRR SVAKAASESS LDSSSSYNSE 51 100 ENSP00000235332/1-388 TPSTPETSST SLSTSCPRGR SSVWGPPDAC RGDLRDVARS GVASLPPAKC bmy_12768T0/1-359 MPSSQETSSV ASRASCPQDA H----QGDPC DR---DGASS GVISLPPAKC ENSBTAP00000026058/1-381 MPSSQEMSSV ASRASCPQDA H----PGDPC GRYWPGDASS GMNSLLPATC ENSTTRP00000003294/1-376 MPSSQETSSV ASRASCPQDA H----RGDPC DR---DGASS GVVSLPPARC 101 150 ENSP00000235332/1-388 QHQESLGRPR PHSAPSLGTS SLRDPEPSGR LGDPGPQEAQ TPRSILAQQS bmy_12768T0/1-359 LHQESPGPLR PHSAPLLATS GLSDPELSAE LDSLDTQEAQ ALKSILAQRS ENSBTAP00000026058/1-381 LYRESLGPPR PHSAPLLAIS DSSDPELSAE LDSPGTQEAQ ALRSILAQQG ENSTTRP00000003294/1-376 LHQEPPGPLR PCSAPLLATS DSSDPEPSAE LDSLDTQEAQ ALKSLLAQRS 151 200 ENSP00000235332/1-388 KLSKPRVTFS EESAVPKRSW RLRPYLGYDW IAGSLDTSSS ITSQPEAFFS bmy_12768T0/1-359 KLSEPRVT-N KESPVPEKSW RLRPCLGYDW IAGSLDNSSP VTSKPEAFFS ENSBTAP00000026058/1-381 KLSKPRVT-N KESPVPEKSW RLRPYLGYDW IAGSLDNTFP VTSKPEAFFS ENSTTRP00000003294/1-376 KLSEPRVT-N KESPVPEKSW RLRPCLGCDW IAGSPDNSSP VTSKPEAFFS 201 250 ENSP00000235332/1-388 KLQEFRETNK EECICSHPEP QLPGLRESSG SGVEEDHECV YCYRVNRRLF bmy_12768T0/1-359 KLQKFREANK EECICSGPES QFLGLQES-- GAVEGDHE-- WVVRVG---- ENSBTAP00000026058/1-381 KLQKFREANK EECICSGPEP QFLGLQES-- DAVEGDHECV YCYRVNRRLF ENSTTRP00000003294/1-376 KLQKFREANK EECICNDPES QFLGLQES-- SAAEEDHECV YCYCVNRRLF 251 300 ENSP00000235332/1-388 PVPVDPGTPC RLCRTPRDQQ GPGTLAQPAH VRVSIPLSIL EPPHRYHIHR bmy_12768T0/1-359 --SGGGGASS VTCVLLP--- -----CQPAP VSGAFGSWHP LPPVPDTTGP ENSBTAP00000026058/1-381 LVPADPGTPC RLCRKPRDQR GAGTLAEPAQ VRVSIPLSVL DPPHRHRIHR ENSTTRP00000003294/1-376 LVPSDPGTPC CLCRTPRGQR GPETLAEPAQ VRVRIPLSVL DPPHRYRIHR 301 350 ENSP00000235332/1-388 RKSFDASDTL ALPRHCLLGW DIFPPKSEKS SAPRNLDLWS SVSAEAQHQK bmy_12768T0/1-359 AGSGDPGRAS A-GQHCLLGW DILPPKSEKS SAPKSLDLWS SVSSEAQRRK ENSBTAP00000026058/1-381 RKSFDASDTL ALPRHCLLGW DIIPPKSEKS SAPKTLDLWS SVSPEAHHQK ENSTTRP00000003294/1-376 RKSFDASDTL ALPRHCLLGW DILPPKSEKS SAPKSLDLWS SVSSEAQRRK 351 400 ENSP00000235332/1-388 LSGTSSPFHP ASPMQMLPPT PTWSVP-QVP RPHVPRQKP- ----- bmy_12768T0/1-359 LSATSLS-HR -VRSRVP--- --WER--QMP WSSLGTAESW GAGLG ENSBTAP00000026058/1-381 LSATSCP-HL AVPMRVPPPT PIWSEPSSMP RPRSPKPKP- ----- ENSTTRP00000003294/1-376 LSATSPS-HR AVPTWVP-AT LIWSEP-SMP QPRAARPKP- -----