KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:57 2014 Check: 00 .. Name: BACU013507/1-677 Len: 687 Check: 1940 Weight: 1.00 Name: bmy_14624T0/1-273 Len: 687 Check: 6043 Weight: 1.00 Name: ENSBTAP00000026080/1-367 Len: 687 Check: 8544 Weight: 1.00 Name: ENSTTRP00000011665/1-367 Len: 687 Check: 7216 Weight: 1.00 Name: ENSP00000215659/1-367 Len: 687 Check: 8506 Weight: 1.00 // 1 50 BACU013507/1-677 MEARPHRPPC SSAYDTRLRQ RVAVKKLSRP FQSLIHARRT YRELRLLKHL bmy_14624T0/1-273 -MSSP--PPA RKGF------ ---------- ---------- YRQ------- ENSBTAP00000026080/1-367 -MSSP--SSA RKGF------ ---------- ---------- YRQ------- ENSTTRP00000011665/1-367 -MSSP--PPA RKGF------ ---------- ---------- YRQ------- ENSP00000215659/1-367 -MSSP--PPA RSGF------ ---------- ---------- YRQ------- 51 100 BACU013507/1-677 KHENVSRGRP GRGVVSREEG LLALGLSVSA GPLGWRSAAS PRLSEEGLGV bmy_14624T0/1-273 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026080/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011665/1-367 ---------- ---------- ---------- ---------- ---------- ENSP00000215659/1-367 ---------- ---------- ---------- ---------- ---------- 101 150 BACU013507/1-677 GRLMETPPPT VDIWSVGCIM AELLQGKALF PGNDCILGAG SAAARWGSRG bmy_14624T0/1-273 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026080/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011665/1-367 ---------- ---------- ---------- ---------- ---------- ENSP00000215659/1-367 ---------- ---------- ---------- ---------- ---------- 151 200 BACU013507/1-677 VGSVPLRATL GSLSPAAGEQ VPGSDPTSGV WGPGESPCLA VGHFLSQADI bmy_14624T0/1-273 ---------- ---------- ----EVTKTA W--------- ---------- ENSBTAP00000026080/1-367 ---------- ---------- ----EVTKTA W--------- ---------- ENSTTRP00000011665/1-367 ---------- ---------- ----EVTKTA W--------- ---------- ENSP00000215659/1-367 ---------- ---------- ----EVTKTA W--------- ---------- 201 250 BACU013507/1-677 DQLKRIMEVV GTPSPEVLAK ISSEHARTYI QSLPHMPQKD LRSIFHGANP bmy_14624T0/1-273 ---------- ---------- ---------- ---------E VRAVYQDLQP ENSBTAP00000026080/1-367 ---------- ---------- ---------- ---------E VRVVYQDLQP ENSTTRP00000011665/1-367 ---------- ---------- ---------- ---------E VRAVYQDLQP ENSP00000215659/1-367 ---------- ---------- ---------- ---------E VRAVYRDLQP 251 300 BACU013507/1-677 LAVDLLGRML VLDSDQRVSA AEALAHAYFS QYHDPEDEPE AEPYDESVEA bmy_14624T0/1-273 VG-------- ---------- ---------- ---------- ---------- ENSBTAP00000026080/1-367 VG-------- ---------- ---------- ---------- ---------- ENSTTRP00000011665/1-367 VG-------- ---------- ---------- ---------- ---------- ENSP00000215659/1-367 VG-------- ---------- ---------- ---------- ---------- 301 350 BACU013507/1-677 KERTVEEWKE LTYQEVLSFK PPEPPQPPGS LDVKHSAVDS RTGAKVAIKK bmy_14624T0/1-273 ---------- ---------- -------SGA YGAVCSAVDS RTGAKVAIKK ENSBTAP00000026080/1-367 ---------- ---------- -------SGA YGAVCSAVDS RTGAKVAIKK ENSTTRP00000011665/1-367 ---------- ---------- -------SGA YGAVCSAVDS RTGAKVAIKK ENSP00000215659/1-367 ---------- ---------- -------SGA YGAVCSAVDG RTGAKVAIKK 351 400 BACU013507/1-677 LYRPFQSELF AKRAYRELRL LKHMRHENVI GLLDVFTPNE TLDDFTDFYL bmy_14624T0/1-273 LYRPFQSELF AKRAYRELRL LKHMRHENVI GLLDVFTPNE TLDDFTDFYL ENSBTAP00000026080/1-367 LYRPFQSELF AKRAYRELRL LKHMRHENVI GLLDVFTPDE TLDDFMDFYL ENSTTRP00000011665/1-367 LYRPFQSELF AKRAYRELRL LKHMRHENVI GLLDVFTPNE TLDDFTDFYL ENSP00000215659/1-367 LYRPFQSELF AKRAYRELRL LKHMRHENVI GLLDVFTPDE TLDDFTDFYL 401 450 BACU013507/1-677 VMPFMGTDLG KLMKHEKLSE DRIQFLVYQM LKGLKYIHAA GIIHRDLKPG bmy_14624T0/1-273 VMPFMGTDLG KLMKHEKLSE DRIQFLVYQM LKGLKYIHAA GIIHRDLKPG ENSBTAP00000026080/1-367 VMPFMGTDLG KLMKHEKLSE DRVQFLVYQT LKGLKYIHAA GVIHRDLKPS ENSTTRP00000011665/1-367 VMPFMGTDLG KLMKHEKLSE DRIQFLVYQM LKGLKYIHAA GIIHRDLKPG ENSP00000215659/1-367 VMPFMGTDLG KLMKHEKLGE DRIQFLVYQM LKGLRYIHAA GIIHRDLKPG 451 500 BACU013507/1-677 NLAVNEDCEL KILDFGLARQ ADSEMTGYVV TRWYRAPEVI LNWMHYTQT- bmy_14624T0/1-273 NLAVNEDCEL KILDFGLARQ ADSEMTGYVV TRWYRAPEVI LNWMHYTQT- ENSBTAP00000026080/1-367 NLAVNEDCEL KILDFGLARQ ADSEMTGYVV TRWYRAPEVI LNWMHYTQTV ENSTTRP00000011665/1-367 NLAVNEDCEL KILDFGLARQ ADSEMTGYVV TRWYRAPEVI LNWMHYTQTV ENSP00000215659/1-367 NLAVNEDCEL KILDFGLARQ ADSEMTGYVV TRWYRAPEVI LNWMRYTQTV 501 550 BACU013507/1-677 ---------G ELCSLALHCA PDLSQDLDQL KEIMKVTGTP PPEFVQRLQS bmy_14624T0/1-273 ---------G EE--LPGDAA PR-------- ----RRLPRP P--------- ENSBTAP00000026080/1-367 DIWSVGCIMA EM--ITGKTL FKGNDHLDQL KEIMKVTGTP PAEFVQRLQS ENSTTRP00000011665/1-367 DIWSVGCIMA EM--ITGETL FKGSDHLDQL KEIMKVTGTP PAEFVQRLQS ENSP00000215659/1-367 DIWSVGCIMA EM--ITGKTL FKGSDHLDQL KEIMKVTGTP PAEFVQRLQS 551 600 BACU013507/1-677 AEAQNYMKGL PELEKKDFAS ILTNASPLAV NLLEKMLVLD AERRVTAAKA bmy_14624T0/1-273 ---------L PELLCREAAE L--------- ---------- --GRGWAGRG ENSBTAP00000026080/1-367 DEAKNYMKGL PELEKKDFAS VLTNASPLAV SLLEKMLVLD AERRVTAAEA ENSTTRP00000011665/1-367 AEAQNYMNGL PELEKKDFAD ILTNASPLAV NLLEKMLVLD AERRVTAAKA ENSP00000215659/1-367 DEAKNYMKGL PELEKKDFAS ILTNASPLAV NLLEKMLVLD AEQRVTAGEA 601 650 BACU013507/1-677 LTHPYFESLH DTEDEPTAQK YDESFDDVDR MLDEWKRFAL AWRPRAPLFI bmy_14624T0/1-273 ---------- ---------R LDGS------ ----WAHAPL H--------- ENSBTAP00000026080/1-367 LAHPYFESLH DTEDDPQAEK YDESFDDMDR TLDEWKRVTY K--------- ENSTTRP00000011665/1-367 LTHPYFESLH DTEDEPKAQK YDESFDDVDR TLEEWKRVTY R--------- ENSP00000215659/1-367 LAHPYFESLH DTEDEPQVQK YDDSFDDVDR TLDEWKRVTY K--------- 651 700 BACU013507/1-677 SEGSQHLLSL RLGSDACPVP GPPSAGALTS HAGTGLV bmy_14624T0/1-273 ---------- RPHSRVCVCP PPQPTGP--- ------- ENSBTAP00000026080/1-367 ---------- ----EVLSFK PPRQLGAKVS KETAL-- ENSTTRP00000011665/1-367 ---------- ----EVLSFK PPRQLGAKVS KETAL-- ENSP00000215659/1-367 ---------- ----EVLSFK PPRQLGARVS KETPL--