KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:58 2014 Check: 00 .. Name: ENSP00000260113/1-258 Len: 271 Check: 1763 Weight: 1.00 Name: ENSBTAP00000026091/1-258 Len: 271 Check: 1513 Weight: 1.00 Name: ENSTTRP00000002063/1-258 Len: 271 Check: 119 Weight: 1.00 Name: BACU011159/1-188 Len: 271 Check: 9691 Weight: 1.00 Name: bmy_13456T0/1-167 Len: 271 Check: 1821 Weight: 1.00 // 1 50 ENSP00000260113/1-258 ---------- ---MIAISAV SSALLFSLLC EASTVVLLNS TDSSPPTNNF ENSBTAP00000026091/1-258 ---------- ---MIAISAV NSALLFSLLC EASAVVLLNS TDSSPPTNNF ENSTTRP00000002063/1-258 ---------- ---MIAISAI SSALLLSLLC EASAVILLNS TDSSPPTNNF BACU011159/1-188 KANSVASLSP PLKMIAISAI SSALLLSLLC EASAAVLLNS TDSSPPTNNF bmy_13456T0/1-167 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000260113/1-258 TDIEAALKAQ LDSADIPKAR RKRYISQNDM IAILDYHNQV RGKVFPPAAN ENSBTAP00000026091/1-258 TDIEAALEAQ LDSADIPKTR RKRYISQNDM IAILDYHNQV RGKVFPPAAN ENSTTRP00000002063/1-258 TDIEAALKAQ LDSADIPKAR RKRYISQNDM IAILDYHNQV RGKVFPPAAN BACU011159/1-188 TDIEAALKAQ LDSADIPKAR RKRYISQNDM IAILDYHNQV RGKVFPPAAN bmy_13456T0/1-167 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000260113/1-258 MEYMVWDENL AKSAEAWAAT CIWDHGPSYL LRFLGQNLSV RTGRYRSILQ ENSBTAP00000026091/1-258 MEYMVWDENL AKSAEAWAAT CIWDHGPSYL LRFLGQNLSV RTGRYRSILQ ENSTTRP00000002063/1-258 MEYMVWDENL AKSAEAWAAT CIWDHGPSYL LRFLGQNLSV RTGRYRSILQ BACU011159/1-188 MEYMVWDENL AKSAEAWAAT CIWDHGPSYL LRFLGQNLSV RTGR------ bmy_13456T0/1-167 ----VWDENL AKSAEAWAAT CIWDHGPSYL LRFLGQNLSV RTGRYRSILQ 151 200 ENSP00000260113/1-258 LVKPWYDEVK DYAFPYPQDC NPRCPMRCFG PMCTHYTQMV WATSNRIGCA ENSBTAP00000026091/1-258 LVKPWYDEVK DYAFPYPQDC NPRCPMRCFG PMCTHYTQMV WATSNRIGCA ENSTTRP00000002063/1-258 LVKPWYDEVK DYAFPYPQDC NPRCPMRCFG PMCTHYTQMV WATSNRIGCA BACU011159/1-188 ---------- ---------- ---------- ---------- ---------- bmy_13456T0/1-167 LVKPWYDEVK DYAFPYPQDC NPRCPMRCFG PMCTHYTQMV WATSNRIGCA 201 250 ENSP00000260113/1-258 IHTCQNMNVW GSVWRRAVYL VCNYAPKGNW IGEAPYKVGV PCSSCPPSYG ENSBTAP00000026091/1-258 IHTCQNMNVW GAVWRRAVYL VCNYAPKGNW IGEAPYKVGV PCSACPPSYG ENSTTRP00000002063/1-258 IHTCQNMNVW GAVWRRAVYL VCNYAPKGNW IGEAPYKVGV PCSACPPSYG BACU011159/1-188 ---------- ---------- -------GNW IGEAPYKVGV PCSACPPSYG bmy_13456T0/1-167 IHTCQNMNVW GAVWRSAVYL VCNYAPKGNW IGEAPYKVGV PCSACPPSYG 251 300 ENSP00000260113/1-258 GSCTDNLCFP GVTSNYLYWF K ENSBTAP00000026091/1-258 GSCTDNLCFP GVTSNYLYWF K ENSTTRP00000002063/1-258 GSCTDNLCFA GVTSNYLYWF K BACU011159/1-188 GSCTDNLCFA GVTSNYLYWF K bmy_13456T0/1-167 GSCTDNLCFA GVTSNYLYWF K