KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:27:58 2014 Check: 00 .. Name: ENSP00000381047/1-375 Len: 376 Check: 9293 Weight: 1.00 Name: bmy_21840T0/1-277 Len: 376 Check: 1102 Weight: 1.00 Name: ENSBTAP00000026102/1-256 Len: 376 Check: 9479 Weight: 1.00 Name: ENSTTRP00000013842/1-293 Len: 376 Check: 2708 Weight: 1.00 // 1 50 ENSP00000381047/1-375 MKLTRKMVLT RAKASELHSV RKLNCWGSRL TDISICQEMP SLEVITLSVN bmy_21840T0/1-277 MKLTRKMVLS RAKASELHSV RKLNCWGSRL TDISICREMP SLEVITLSVN ENSBTAP00000026102/1-256 MKLTRKMVLS RAKASELHSV RKLNCWGSRL TDISICREMP SLEVITLSVN ENSTTRP00000013842/1-293 -MLTRKMVLS RSKASELHSV RKLNCWGSXX XXXXXXXXXX X----XXXVN 51 100 ENSP00000381047/1-375 SISTLEPVSR CQRLSELYLR RNRIPSLAEL FYLKGLPRLR VLWLAENPCC bmy_21840T0/1-277 SISTLEPVSR CRQLSELYLR KNCIPSLAEL FYLKGLPCLR VLWLAENPCC ENSBTAP00000026102/1-256 SISSLEPVSR CRQLSELYLR KNCIPSLAEL IHLKGLPRLR VLWLAENPCC ENSTTRP00000013842/1-293 SISTLEPVSR CRQLSELYLR KNCISSLAEL FYLKGLPCLR VLWLAENPCC 101 150 ENSP00000381047/1-375 GTSPHRYRMT VLRTLPRLQK LDNQAVTEEE LSRALSEGEE ITAAPEREGT bmy_21840T0/1-277 GACPHLYRMT VLRNLPHLQK LDNQAVTEEE VSRALVEGEE VTA-PSREDS ENSBTAP00000026102/1-256 GTCPHLYRMT VLRTLPQLQK LDNQAVTEEE VSRALMEGEE VTA-PSREDL ENSTTRP00000013842/1-293 GACPHLYRMT VLRNLPHLQK LDNQAVTEEE VSRALVEGEE VTA-PSRQHS 151 200 ENSP00000381047/1-375 GHGGPKLCCT LSSLSSAAET GRDPLDSEE- EATGAQDERG LKPPSRGQFP bmy_21840T0/1-277 GSGPPELSYT PSAVDAAAEM PRDPLSLGE- EETSIQGQLG LKRASRDRXX ENSBTAP00000026102/1-256 GSGPPELSYT LSAVDAATET TQDPLNLGKG EASSDQGQLG LKPTSRDQFP ENSTTRP00000013842/1-293 GNGPPELSYT LSAEDAAAEM PRDPLSLGE- ESSSTQGQLG LKRPSRDQFP 201 250 ENSP00000381047/1-375 SLSARDASSS HRGRVSGGPL GAAAASAHCT HCTETVGREH GASQGPVGRE bmy_21840T0/1-277 XXSLLLAEGG HRQ------- ---------- --SQERGECD GGCSGRKWLQ ENSBTAP00000026102/1-256 PFSQQEATSS -RS------- ---------- --SK------ ---------- ENSTTRP00000013842/1-293 SFSQRAATSS -RK------- ---------- --NRVSVTEA SGEEAPEWEI 251 300 ENSP00000381047/1-375 HGASQGLEEL CPRGSCVCGS VNAHTRVTRA PHGAVLAPQP LLLSWSVECG bmy_21840T0/1-277 NVETGGRGLE TPQGRA---- ---------- ---------- -------KPG ENSBTAP00000026102/1-256 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013842/1-293 GGGGGGRGLE TPQGRA---- ---------- ---------- -------KPG 301 350 ENSP00000381047/1-375 PGPCWAEGNR SHVEEVPHTR PQAGLLCSDS PSVPNVLTAI LLLLRELDAE bmy_21840T0/1-277 P--------- ---------- ---------- ---------- ----RGWEAD ENSBTAP00000026102/1-256 --------N- ---------- ---------- ----NILMAI LMLLRELDIE ENSTTRP00000013842/1-293 PGGSRPSGN- ---------- ---------- ----NVLTAV LLLLRELDSE 351 400 ENSP00000381047/1-375 GLEAVQQTVG SRLQALRGEE VQEHAE bmy_21840T0/1-277 RLGPVSVST- ---SKLVGRG RRRRGA ENSBTAP00000026102/1-256 GLEAVHQTVV SRLQALHKRE LQEDME ENSTTRP00000013842/1-293 GLEAVHQRVV SRLQALQKQE LQEAME