KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:59 2014 Check: 00 .. Name: ENSP00000300571/1-403 Len: 414 Check: 2386 Weight: 1.00 Name: ENSTTRP00000004750/1-402 Len: 414 Check: 3059 Weight: 1.00 Name: ENSBTAP00000026109/1-387 Len: 414 Check: 3055 Weight: 1.00 Name: bmy_06289T0/1-344 Len: 414 Check: 727 Weight: 1.00 Name: BACU012912/1-399 Len: 414 Check: 6576 Weight: 1.00 // 1 50 ENSP00000300571/1-403 ---------- -MFVASERKM RAHQVLTFLL LFVITSVASE NASTSRGCGL ENSTTRP00000004750/1-402 ---------- -TFTVSERKM RTHQVLAFLL LFVIASGASE NTSTSRGCGL ENSBTAP00000026109/1-387 ---------- ---------M RTHQALAFLL LFVIASGASE NASTSRGCGL bmy_06289T0/1-344 ---------- ---------M RTHQVLAFLL LFVIASGASE NTSTSRGCGL BACU012912/1-399 MNWSFPPNSS GTFTVSERKM RTHQVLAFLL LFVIASGASE NTSTSRGCGL 51 100 ENSP00000300571/1-403 DLLPQYVSLC DLDAIWGIVV EAVAGAGALI TLLLMLILLV RLPFIKEKEK ENSTTRP00000004750/1-402 DLLPQYVSLC DLDTIWGIVV EAVAGAGALI TLLLILILLV RLPFIKDKEK ENSBTAP00000026109/1-387 DLLPQYVSLC DLDTIWGIVV EAVAGAGALI TLLLMLILLV RLPFIKDKEK bmy_06289T0/1-344 DLLPQYVSLC DLDTIWGIVV EAVAGAGALI TLLLTLVLLV RLPFIKDKEK BACU012912/1-399 DLLPQYVSLC DLDTIWGIVV EAVAGAGALI TLLLTLVLLV RLPFIKDKEK 101 150 ENSP00000300571/1-403 KSPVGLHFLF LLGTLGLFGL TFAFIIQEDE TICSVRRFLW GVLFALCFSC ENSTTRP00000004750/1-402 KDPVGLHFLF LLGTLGLFGL TFAFIIREDE TICAVRRFLW GVLFALCFSC ENSBTAP00000026109/1-387 KDPVGLHFLF LLGTLGLFGL TFAFIIREDE TICSVRRFLW GVLFALCFSC bmy_06289T0/1-344 KDPVGLHFLF LLGTLGLFGL TFAFIIREDE TICSVRRFLW GVLFALCFSC BACU012912/1-399 KDPVGLHFLF LLGTLGLFGL TFAFIIREDE TICSVRRFLW GVLFALCFSC 151 200 ENSP00000300571/1-403 LLSQAWRVRR LVRHGTGPAG WQLVGLALCL MLVQVIIAVE WLVLTVLRDT ENSTTRP00000004750/1-402 LLSQAWRVRR LVRRGKSPSG WQLVGVALCL MLVQVIIAIE WLVLTVLRDE ENSBTAP00000026109/1-387 LLSQAWRVRR LVRHGKSPSG WQLVGMALCL MLVQVIIAIE WLVLTVLRDA bmy_06289T0/1-344 LLSQAWRVRR LVRHGKSPSG WQLVGVALCL MLVQVIIAIE WLVLTVLRDE BACU012912/1-399 LLSQAWRVRR LVRHGKSPSG WQLVGVALCL MLVQVIIAIE WLVLTVLRDE 201 250 ENSP00000300571/1-403 RPACAYEPMD FVMALIYDMV LLVVTLGLAL FTLCGKFKRW KLNGAFLLIT ENSTTRP00000004750/1-402 KPACAYEPMD FAMALIYDMV LLVATLGLAL FTLCGKFKKW KQNGVCILVT ENSBTAP00000026109/1-387 KPACAYEPMD FAMALIYDMV LLVATLALAF FSLCGKFKKW KQNGVCILVT bmy_06289T0/1-344 KPACAYEPMD FAMALIYDMV LLVATLGLAL FTLCGKFKKW KQNGVCILVT BACU012912/1-399 KPACAYEPMD FAMALIYDMV LLVATLGLAL FTLCGKFKKW KQNGVCILVT 251 300 ENSP00000300571/1-403 AFLSVLIWVA WMTMYLFGNV KLQQGDAWND PTLAITLAAS GWVFVIFHAI ENSTTRP00000004750/1-402 AFLSVLVWVA WMTMYLFGNA ELRQGDAWGD PTLAITLVAS GWVFVIFHAI ENSBTAP00000026109/1-387 AFLSVLIWVA WMTMYLFGNA ELRQGDAWGD PTLAITLVAS GWVFVIFHAI bmy_06289T0/1-344 AFLSVLIWVA WMTMYLFGNA ELRQGDAWGD PTLAITLVAS GWVFVIFHAI BACU012912/1-399 AFLSVLIWVA WMTMYLFGNA ELRQGDAWGD PTLAITLVAS GWVFVIFHAI 301 350 ENSP00000300571/1-403 PEIHCTLLPA LQENTPNYFD TSQPRMRETA FEEDVQLPRA YMENKAFSMD ENSTTRP00000004750/1-402 PEVHCTILPS PQENAPNYFD TSQPRMRETA FEEDVPLPRT YMENKAFSMD ENSBTAP00000026109/1-387 PEIHCTILPA PQENTPNYFD TSQPRMRETA FEEDVQLPRT YMENKAFSMD bmy_06289T0/1-344 PEIHCTILPA PQENTPNYFD TSQPRMRETA FEEDVQLPRT YMENKAFSMD BACU012912/1-399 PEIHCTILPA PQENTPNYFD TSQPRMRETA FEEDVQLPRT YMENKAFSMD 351 400 ENSP00000300571/1-403 EHNAALRTAG FPNGSLGKRP SGSLGKRPSA PFRSNVYQPT EMAVVLNGGT ENSTTRP00000004750/1-402 EHGAALRT-G FRNGXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000026109/1-387 EHNAALRTAG FRNGSLGNRP SA-------- PFRSNVYQPT EMAVVLNGGT bmy_06289T0/1-344 EHNA------ ---GKVGTAP LG-------- ---------- ---------- BACU012912/1-399 EHNAALRT-G FRNGSLGNRP SA-------- PFRSNVYQPT EMAVVLNGGT 401 450 ENSP00000300571/1-403 IPTAPPSHTG RHLW ENSTTRP00000004750/1-402 IPTAPPSYAG RHLW ENSBTAP00000026109/1-387 IPTAPPSYTG RHLW bmy_06289T0/1-344 ---------- ---- BACU012912/1-399 LPLPRLNL-- ----