KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:01 2014 Check: 00 .. Name: ENSBTAP00000026122/1-440 Len: 440 Check: 4731 Weight: 1.00 Name: ENSP00000362121/1-437 Len: 440 Check: 5189 Weight: 1.00 Name: bmy_18455T0/1-247 Len: 440 Check: 6831 Weight: 1.00 Name: ENSTTRP00000004248/1-437 Len: 440 Check: 4051 Weight: 1.00 // 1 50 ENSBTAP00000026122/1-440 MEKELRSTIL FNAYKKEVFT TSNGYKSMQK RLRSHWKIQS LKDEITPEKL ENSP00000362121/1-437 MEKELRSTIL FNAYKKEIFT TNNGYKSMQK KLRSNWKIQS LKDEITSEKL bmy_18455T0/1-247 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004248/1-437 MEKELRSTIL FNAYKKEVFT TSNGYKSMQK RLRSNWKIQS LKDEITSEKL 51 100 ENSBTAP00000026122/1-440 IGVKLWITAG PREKFTAAEF EILKKYLDGG GDILVMLGEG GESRFDTNIN ENSP00000362121/1-437 NGVKLWITAG PREKFTAAEF EILKKYLDTG GDVFVMLGEG GESRFDTNIN bmy_18455T0/1-247 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004248/1-437 TGVKLWITAG PREKFTAAEF EVLKKYLDGG GDILVMLGEG GESRFDTNIN 101 150 ENSBTAP00000026122/1-440 FLLEEYGIMV NNDAVVRNVY YKYFHPKEAL VSNGVLNREI SRAAGKAVPG ENSP00000362121/1-437 FLLEEYGIMV NNDAVVRNVY HKYFHPKEAL VSSGVLNREI SRAAGKAVPG bmy_18455T0/1-247 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004248/1-437 FLLEEYGIMV NNDAVVRNVY YKYFHPKEAL VSNGVLNREI SRAAGKAVPG 151 200 ENSBTAP00000026122/1-440 ILDEESSGNN AQALTFVYPF GATLSVTKPA VAVLSTGSVC FPLNRPILAF ENSP00000362121/1-437 IIDEESSGNN AQALTFVYPF GATLSVMKPA VAVLSTGSVC FPLNRPILAF bmy_18455T0/1-247 ---------- ---------- ------MKPA VAVLSTGSVC FPLNRPILAF ENSTTRP00000004248/1-437 IIEEESSGNN AQALTFVYPF GATLSVMKPA VAVLSTGSVC FPLNRPILAF 201 250 ENSBTAP00000026122/1-440 YHSKNQGGKL AVLGSCHMFS DQYLDKEENS KIMDVVFRWL TTEDIHLNQI ENSP00000362121/1-437 YHSKNQGGKL AVLGSCHMFS DQYLDKEENS KIMDVVFQWL TTGDIHLNQI bmy_18455T0/1-247 YHSKNQGGKL AVLGSCHMFS DQYLDKEENS KIMDVVFQWL TTGDIHLNQI ENSTTRP00000004248/1-437 YHSKNQGGKL AVLGSCHMFS DQYLDKEENS KIMDVVFQWL TTGDIHLNQI 251 300 ENSBTAP00000026122/1-440 DAEDPEISDY MMLPDTAALS ERLRVCLQEG DENPRDFTSL FDLSLYQLDT ENSP00000362121/1-437 DAEDPEISDY MMLPYTATLS KRNRECLQES DEIPRDFTTL FDLSIFQLDT bmy_18455T0/1-247 DAEDPEISDY MMLPDTATLS ERLRVCLQEG DENPRDFTTL FDLSVYQLDT ENSTTRP00000004248/1-437 DAEDPEISDY MMLPDTATLS ERLRVCLQEG DENPRDFTTL FDLSIYQLDT 301 350 ENSBTAP00000026122/1-440 TSLPKVIKAY EQLNVKHEPL QLIQPQFETP LPALQPAVFP PSFRELPPPP ENSP00000362121/1-437 TSFHSVIEAH EQLNVKHEPL QLIQPQFETP LPTLQPAVFP PSFRELPPPP bmy_18455T0/1-247 TSLPKVIKAH EQLNVKHEPL QLIQPQFETP LPALQPAVFP PSFRELSPPP ENSTTRP00000004248/1-437 TSLPKVIKAH EQLNVKHEPL QLIQPQFETP LPALQPAVFP PSFRELSPPP 351 400 ENSBTAP00000026122/1-440 LELFDLDETF SSEKARLAQI TNKCTEEDLE FYVRKCGDIL GVTNKIYQSE ENSP00000362121/1-437 LELFDLDETF SSEKARLAQI TNKCTEEDLE FYVRKCGDIL GVTSKLPKDQ bmy_18455T0/1-247 LELFDLDETF SSEKARLAQI TNKCTEEDLE FYIRKCGDIL GVTNKLPKDQ ENSTTRP00000004248/1-437 LELFDLDETF SSEKARLAQI TNKCTEEDLE FYIRKCGDIL GVTSKLPKDQ 401 450 ENSBTAP00000026122/1-440 RSAKHCFHRR KPSVVLFSSL LQEHDIDTRH SRTASEDQAS ENSP00000362121/1-437 QDAKHILEHV FFQVVEFKKL NQEHDIDT-- SETAFQNNF- bmy_18455T0/1-247 QDAKHILEHI FFQVVEFKKL NQV------- ---------- ENSTTRP00000004248/1-437 QDAKHILEHI FFQVVEFKKL NQEHDIDT-- SETAFQNNF-