KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:02 2014 Check: 00 .. Name: ENSP00000010299/1-341 Len: 374 Check: 380 Weight: 1.00 Name: ENSTTRP00000004608/1-306 Len: 374 Check: 8089 Weight: 1.00 Name: ENSBTAP00000026131/1-307 Len: 374 Check: 9856 Weight: 1.00 Name: bmy_01989T0/1-266 Len: 374 Check: 8094 Weight: 1.00 Name: BACU003251/1-340 Len: 374 Check: 6511 Weight: 1.00 // 1 50 ENSP00000010299/1-341 MAALYACTKC HQRFPFEALS QGQQLCKECR IAHPVVKCTY CRTEYQQERL ENSTTRP00000004608/1-306 MAALYACTKC HQRFPFEALS QGQQLCKECR IAHPVVKCTY CRTEYQQES- ENSBTAP00000026131/1-307 MAALYACTKC HQRFPFEALS QGQQLCKECR IAHPVVKCTY CRTEYQQES- bmy_01989T0/1-266 MAALYACTKC HQRFPFEALS QGQQLCK--- ---------- ---------- BACU003251/1-340 MAALYACTKC HQRFPFEALS QGQQLCKECR IAHPVVKCTY CRTEYQQES- 51 100 ENSP00000010299/1-341 ECNGTISAHC NLHLPGSSDS PASSSRVAGI TGIKTNTICK KCAQNVQLYG ENSTTRP00000004608/1-306 ---------- ---------- ---------- ---KTNTICK KCAQNVQLYG ENSBTAP00000026131/1-307 ---------- ---------- ---------- ---KTNTICK KCAQNVQLYG bmy_01989T0/1-266 ---------- ---------- ---------- ---------- ---------- BACU003251/1-340 ---------- ---------- ---------- ---KTNTICK KCAQNVQLYG 101 150 ENSP00000010299/1-341 TPKPCQYCNI IAAFIGNKCQ RCTNSEKKYG PPYSCEQCKQ QCAFDRKDDR ENSTTRP00000004608/1-306 TPKPCQYCNI IAAFIGNKCQ RCTNSEKKYG PPYSCEQCKQ QCAFDRKDDR ENSBTAP00000026131/1-307 TPKPCQYCNI IAAFIGNKCQ RCTNSEKKYG PPYSCEQCKQ QCAFDRKDDR bmy_01989T0/1-266 -PKPCQYCNI IAAFIGNKCQ RCTNSEKKYG PPYSCEQCKQ QCAFDRKDDR BACU003251/1-340 TPKPCQYCNI IAAFIGNKCQ RCTNSEKKYG PPYSCEQCKQ QCAFDRKDDR 151 200 ENSP00000010299/1-341 KKVDGKLLCW LCTLSYKRVL QKTKEQRKHL SSSSRAGHQE KEQYSRLSGG ENSTTRP00000004608/1-306 KKVDGKLLCW LCTLSYKRVL QKTKEQRKHL SSSSRASHQE KEQYSRLSGG ENSBTAP00000026131/1-307 KKVDGKLLCW LCTLSYKRVL QKTKEQRKHL SSSSRASHQE KEQYSRLSGG bmy_01989T0/1-266 KK-------- ---------- -KTKEQRKHL SSSSRASHQE KEQYSRLSGG BACU003251/1-340 KKVDGKLLCW LCTLSYKRVL QKTKEQRKHL SSSSRASHQE KEQYSRLGGG 201 250 ENSP00000010299/1-341 GHYNSQK--- --------TL STSSIQNEIP KKKSKFESIT TNGDS----- ENSTTRP00000004608/1-306 SHYNSQK--- --------TL STSSIQNEIP KKKSKFESIT TNGDS----- ENSBTAP00000026131/1-307 SHYNSQK--- --------TL STSSIQNEIP KKKSKFESIT TNGDS----- bmy_01989T0/1-266 SHYNRMKLNI SFPATGCQKL TEVDYERKLC TAYEKSMAME VAADAPDEEW BACU003251/1-340 SHYNRMKLNI SFPATGCQKL TGVDYERKLC TVYAKFMAME VAADAPDEEW 251 300 ENSP00000010299/1-341 ---------- -------FSP DLALDSPGTD HFVIIAQLKE EVATLKKMLH ENSTTRP00000004608/1-306 ---------- -------FSP DLALDSPGTD HFVIIAQLKE EVATLKKMLH ENSBTAP00000026131/1-307 ---------- -------FSP DLALDSPGTD HFVIIAQLKE EVATLKKMLH bmy_01989T0/1-266 R--------- ------VQIS DLALDSPGTD HFVIIAQLKE EVATLKKMLH BACU003251/1-340 RGYVVQISVK WLRCELSFSP DLALDSPGTD HFVIIAQLKE EVATLKKMLH 301 350 ENSP00000010299/1-341 QKDQMILEKE KKITELKADF QYQESQMRAK MNQMEKTHKE VTEQLQAKNR ENSTTRP00000004608/1-306 QKDQMILEKE KKITELKADF QYQESQMRAK MNQMEKTHKE VTEQLQAK-R ENSBTAP00000026131/1-307 QKDQMILEKE KKITELKADF QYQESQMRAK MNQMEKTHKE VTEQLQAKNR bmy_01989T0/1-266 QKDQMILEKE KKITELKADF QYQESQMRAK MNQMEKTHKE VTEQLQAKNR BACU003251/1-340 QKDQMILEKE KKITELKADF QYQESQMRAK MNQMEKTHKE VTEQLQAKNR 351 400 ENSP00000010299/1-341 ELLKQAAALS KSKKSEKSGA ITSP ENSTTRP00000004608/1-306 ELLKQAAALS KSKKSEKSGA ITSP ENSBTAP00000026131/1-307 ELLKQAAALS KSKKSEKSGA ITSP bmy_01989T0/1-266 ELLKQAAALS KSKKSEKSGA ITSP BACU003251/1-340 ELLKQAAALS KSKKSEKSGA ITSP