KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:03 2014 Check: 00 .. Name: ENSP00000255040/1-223 Len: 329 Check: 8840 Weight: 1.00 Name: ENSBTAP00000026133/1-224 Len: 329 Check: 1887 Weight: 1.00 Name: bmy_22361T0/1-224 Len: 329 Check: 1469 Weight: 1.00 Name: BACU003891/1-329 Len: 329 Check: 1893 Weight: 1.00 // 1 50 ENSP00000255040/1-223 MNKPLLWISV LTSLLEAFAH TDLSGKVFVF PRESVTDHVN LITPLEKPLQ ENSBTAP00000026133/1-224 MNKLMSWVSV LIILPEAFAQ TDLRGKVFVF PRESSTDHVT LITKLEKPLK bmy_22361T0/1-224 MDKLLLWVSV LASLPEAFAQ KDLSRKAFVF PRESSTDHVN LITKLEKPLQ BACU003891/1-329 MDKLLLWVSV LASLPEAFAQ KDLSRKVFLF PRESSTDHVN LITKLEKPLQ 51 100 ENSP00000255040/1-223 NFTLCFRAYS DLSRAYSLFS YNTQGRDNEL LVYKERVGEY SLYIGRHKVT ENSBTAP00000026133/1-224 NLTLCLRAYS DLSRGYSLFS YNIHSKDNEL LVFKNGIGEY SLYIGKTKVT bmy_22361T0/1-224 NFALCFXAYS DLSCGYSLFX YNTQGKDNEL LIFKDRIGEY SLYIGRTKVT BACU003891/1-329 NFTLCFRAYS DLSCGYSLFS YNTQGKDNEL LIFKDRIGEY SLYIGRTRVT 101 150 ENSP00000255040/1-223 SKVIEKFPAP VHICVSWESS SGIAEFWING TPLVKKGLRQ GYFVEAQPKI ENSBTAP00000026133/1-224 VRATEKFPSP VHICTSWESS TGIAEFWING KPLVKRGLKQ GYAVGAHPKI bmy_22361T0/1-224 ARVIEEFPTP VHICTSWESS TGIAKFWVIG KPLVKKGLRQ GYSVGANPKI BACU003891/1-329 ARVIEEFPTP VHICTSWESS TGIAEFWING KPLVKKGLRQ GYSVGANPKI 151 200 ENSP00000255040/1-223 VLGQEQDSYG GKFDRSQSFV GEIGDLYMWD SVLPPEN--- ---------- ENSBTAP00000026133/1-224 VLGQEQDSYG GGFDKNQSFM GEIGDLYMWD SVLSPEE--- ---------- bmy_22361T0/1-224 VLGQEQDSYG GGFDKTQSFM GXIGDWYMWX SLLSPEE--- ---------- BACU003891/1-329 VLGQEQDSYG GGFDKTQSFM RQIGDLYMWD SAVSRRDPVC VSAVVGHFFC 201 250 ENSP00000255040/1-223 ---------- --------IL SAYQGTPLPA ---------- ----NILDWQ ENSBTAP00000026133/1-224 ---------- --------IL LVYQGSSSIS P--------- ----TILDWQ bmy_22361T0/1-224 ---------- --------IQ FVYQGSYSLN P--------- ----TILNWQ BACU003891/1-329 DILPAMKLSC IDTTVNEIIN FVVSLSVILV PMGLVFISYV LIISTILNIA 251 300 ENSP00000255040/1-223 ALNYEIRGYV ---------- ---------- ---------- ---------- ENSBTAP00000026133/1-224 ALKYEIKGYV ---------- ---------- ---------- ---------- bmy_22361T0/1-224 ALNYEMKGYV ---------- ---------- ---------- ---------- BACU003891/1-329 SAVGQKKAFA TCASHLTMVM VHYSCASTAY LKPKSENSVE QDLLLSXXXX 301 350 ENSP00000255040/1-223 --IIKPLVWV ---------- --------- ENSBTAP00000026133/1-224 --IVKPMVWG ---------- --------- bmy_22361T0/1-224 --VIKPLVWG ---------- --------- BACU003891/1-329 TPLMNPVVYS LRNKEVKDAL RRAVGRNIS