KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:03 2014 Check: 00 .. Name: ENSTTRP00000008647/1-801 Len: 1393 Check: 85 Weight: 1.00 Name: BACU002690/1-1392 Len: 1393 Check: 9994 Weight: 1.00 Name: ENSP00000261441/1-802 Len: 1393 Check: 3235 Weight: 1.00 Name: ENSBTAP00000026134/1-803 Len: 1393 Check: 3495 Weight: 1.00 Name: bmy_17293T0/1-718 Len: 1393 Check: 2464 Weight: 1.00 // 1 50 ENSTTRP00000008647/1-801 ---------- ---------- ---------- ---------- ---------- BACU002690/1-1392 LKRLSTQYKA DKTYPTTEAE RPKNIKKNRY KDILPYDHSR VELSMITSDE ENSP00000261441/1-802 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026134/1-803 ---------- ---------- ---------- ---------- ---------- bmy_17293T0/1-718 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008647/1-801 ---------- ---------- ---------- ---------- ---------- BACU002690/1-1392 DSSYINANFV KGVYGPKAYI ATQGPLPTTV LDFWRMIWEY SVLIIVMACM ENSP00000261441/1-802 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026134/1-803 ---------- ---------- ---------- ---------- ---------- bmy_17293T0/1-718 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008647/1-801 IFSAGRRMAE KWRVGE---- ------RLQC PAGRARAALA ---------- BACU002690/1-1392 EFEMGKKKCE RYWAEPGEMQ LQLGPFSISC EAENKKSDYT IRTLQAKFNS ENSP00000261441/1-802 MFISGRRTAD KWRAEE---- ------RLQC PAGSARAALA ---------- ENSBTAP00000026134/1-803 MFSSGRRMAE KWRVGE---- ------RLQC PAGRARAALA ---------- bmy_17293T0/1-718 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000008647/1-801 ---------- ---------- ---------- --RYADGGAV GPFKCVFVGE BACU002690/1-1392 EARTIYQFHY KNWPDHDVPS SIDPVLELIW DVRCYQEDNS VPI-CIHCSA ENSP00000261441/1-802 ---------- ---------- ---------- --RCADGGAV GPFKCVFVGE ENSBTAP00000026134/1-803 ---------- ---------- ---------- --RYADGGAV GPFKCVFVGE bmy_17293T0/1-718 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000008647/1-801 MAAQVGAVRI V--------- ---------- ---------- ---------- BACU002690/1-1392 GCGRTGVICA IDYMWMLLKD GIIPENFSVF SLIQEMRTQR PSLVQTQEQY ENSP00000261441/1-802 MAAQVGAVRV V--------- ---------- ---------- ---------- ENSBTAP00000026134/1-803 MAAQVGAVRV V--------- ---------- ---------- ---------- bmy_17293T0/1-718 MAAQVGAVRI V--------- ---------- ---------- ---------- 251 300 ENSTTRP00000008647/1-801 ---------- ---------- ---------R AVAGQEEPDK E--------- BACU002690/1-1392 ELVYNAVLEL FKRQMDVIRD KHSGTEIQAK YSVSKQNPNQ EADSYSPNLP ENSP00000261441/1-802 ---------- ---------- ---------R AVAAQEEPDK E--------- ENSBTAP00000026134/1-803 ---------- ---------- ---------R AVAAQEEADK D--------- bmy_17293T0/1-718 ---------- ---------- ---------R AVAAQEEPDK E--------- 301 350 ENSTTRP00000008647/1-801 ---------- -----GKEK- ---------- ---------- ---------- BACU002690/1-1392 KSIIKEAKVM NQQSKGRIRV KSAEASSFDL RISEISKKEG LVMHPSKQSS ENSP00000261441/1-802 ---------- -----GKEK- ---------- ---------- ---------- ENSBTAP00000026134/1-803 ---------- -----GKEK- ---------- ---------- ---------- bmy_17293T0/1-718 ---------- -----GKEK- ---------- ---------- ---------- 351 400 ENSTTRP00000008647/1-801 ---------- ---------- ------PHAG VS-------- ---------- BACU002690/1-1392 SLEFLELNCG CNKNADTTMK WERKVFPIAG EPLQKHQSLD LSSILFGARP ENSP00000261441/1-802 ---------- ---------- ------PHAG VS-------- ---------- ENSBTAP00000026134/1-803 ---------- ---------- ------PHAG VS-------- ---------- bmy_17293T0/1-718 ---------- ---------- ------PHAG VS-------- ---------- 401 450 ENSTTRP00000008647/1-801 ---------- ---------- ----PRGVKR QR-------- ---------- BACU002690/1-1392 NSKPVNAAGR CFNLKGPIMR TKSTPFELMQ QRDTKELDVE ENFYLESHPH ENSP00000261441/1-802 ---------- ---------- ----PRGVKR QR-------- ---------- ENSBTAP00000026134/1-803 ---------- ---------- ----PRGVKR QR-------- ---------- bmy_17293T0/1-718 ---------- ---------- ----PRGVKR QR-------- ---------- 451 500 ENSTTRP00000008647/1-801 ---------- ---------- ---------- ---------- ---------- BACU002690/1-1392 NSCLEQAQKV MHVSSAEVNY SPSYDSKHQM CNASNAKQHD SGAFKVLSYM ENSP00000261441/1-802 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026134/1-803 ---------- ---------- ---------- ---------- ---------- bmy_17293T0/1-718 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000008647/1-801 ---------- -RASSGGSQE KRGRPSQD-- ---------- ---------- BACU002690/1-1392 SLVEDPYYSS LSPSSAGSKM SLDLPEKQDE TVLPCSSLPK SSTTLFPYYN ENSP00000261441/1-802 ---------- -RSSSGGSQE KRGRPSQE-- ---------- ---------- ENSBTAP00000026134/1-803 ---------- -RASSGGSQE KRGRPSQD-- ---------- ---------- bmy_17293T0/1-718 ---------- -RASSGGSQE KRGRPSQD-- ---------- ---------- 551 600 ENSTTRP00000008647/1-801 ---------- ----PPLA-- ---------- -----PPHRR R--------- BACU002690/1-1392 SRDSLALNPP TNFPPPLTQE TAVVATSPRI NDEIPPPLPE RTPESFIVVE ENSP00000261441/1-802 ---------- ----PPLA-- ---------- -----PPHRR R--------- ENSBTAP00000026134/1-803 ---------- ----PPLA-- ---------- -----PPHRR R--------- bmy_17293T0/1-718 ---------- ----PPLA-- ---------- -----PPHRR R--------- 601 650 ENSTTRP00000008647/1-801 ---------- ---------- ---------- ---------- ---------- BACU002690/1-1392 EAGEFPLDVP KSSSSAVKVK IGTSLECSRT SESKKFDDLS VKPQSPKSDR ENSP00000261441/1-802 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026134/1-803 ---------- ---------- ---------- ---------- ---------- bmy_17293T0/1-718 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000008647/1-801 ---RSRQHPG PLPP------ ---------- ------TNAA PAV------- BACU002690/1-1392 HQDRSSSLPP PLPERTLESF LVADEDCMQA QPIETYSASC PNTMENSTSS ENSP00000261441/1-802 ---RSRQHPG PLPP------ ---------- ------TNAA PTV------- ENSBTAP00000026134/1-803 ---RSRQHPG PLPP------ ---------- ------TNAA PTV------- bmy_17293T0/1-718 ---RSRQHPG PLPP------ ---------- ------TNAA PTV------- 701 750 ENSTTRP00000008647/1-801 ------PG-- ---------- ------PVEP LLLPPPPPPS LAPAGPAVAA BACU002690/1-1392 KQTLKTPGKC FTRSKSLKIL RNMKKSPVEP LLLPPPPPPS LAPAGPAVAA ENSP00000261441/1-802 ------PG-- ---------- ------PVEP LLLPPPPPPS LAPAGPAVAA ENSBTAP00000026134/1-803 ------PG-- ---------- ------PVEP LLLPPPPPPS LAPAGPAVAA bmy_17293T0/1-718 ------PG-- ---------- ------PVEP LLLPPPPPPS LAPAGPAVAA 751 800 ENSTTRP00000008647/1-801 PLPAPGTSAL FTFSPLTVSA AGPKHKGHKE RHKHHHHRGS DGDPGSC--G BACU002690/1-1392 PLPAPGTSAL FTFSPLTVSA AGPKHKGHKE RHKHHHHRGS DADPGSCVPG ENSP00000261441/1-802 PLPAPSTSAL FTFSPLTVSA AGPKHKGHKE RHKHHHHRGP DGDPSSC-GT ENSBTAP00000026134/1-803 PLPAPGTSAL FTFSPLTVSA AGPKHKGHKE RHKHHHHRGS DGDPGPCAPG bmy_17293T0/1-718 PLPAPGTSAL FTFSPLTVSA AGPKHKGHKE RHKHHHHRGS DGDPGSCVPG 801 850 ENSTTRP00000008647/1-801 ELKHKDKQEN GERTGGVPLI KAPKRETPDE NGKTQRADDF VLKKIKKKKK BACU002690/1-1392 ELKHKDKQEN GERTGGVPLI KAPKRETPDE NGKTQRADDF VLKKIKKKKK ENSP00000261441/1-802 DLKHKDKQEN GERTGGVPLI KAPKRETPDE NGKTQRADDF VLKKIKKKKK ENSBTAP00000026134/1-803 ELKHKDKQEN GERTGGVPLL KAPKRETPDE NGKTQRADDF VLKKIKKKKK bmy_17293T0/1-718 ELKHKDKQEN GERTGGVPLI KAPKRETPDE NGKTQRADDF VLKKIKKKKK 851 900 ENSTTRP00000008647/1-801 KKHREDMRGR RLKMYNKEVQ TICAGLTRIS KEILTQGQIN STSGVNKESF BACU002690/1-1392 KKHREDMRGR RLKMYNKEVQ TICAGLTRIS KEILTQGQIN STSGVNKESF ENSP00000261441/1-802 KKHREDMRGR RLKMYNKEVQ TVCAGLTRIS KEILTQGQIN STSGLNKESF ENSBTAP00000026134/1-803 KKHREDMRGR RLKMYNKEVQ TICAGLTRIS KEILTQGQIN STSGVNKESF bmy_17293T0/1-718 KKHREDMRGR RLKMYNKEVQ TICAGLTRIS KEILTQGQIN STSGVNKESF 901 950 ENSTTRP00000008647/1-801 RYLKDEQLCR LNLGMQEYRV PQGVQTPFMT HQEHSIRRNF LKTGTKFSNF BACU002690/1-1392 RYLKDEQLCR LNLGMQEYRV PQGVQTPFMT HQEHSIRRNF LKTGTKFSNF ENSP00000261441/1-802 RYLKDEQLCR LNLGMQEYRV PQGVQTPFMT HQEHSIRRNF LKTGTKFSNF ENSBTAP00000026134/1-803 RYLKDEQLCR LNLGMQEYRV PQGVQTPFMT HQEHSIRRNF LKTGTKFSNF bmy_17293T0/1-718 ---------- ---------- ---------- -------RNF LKTGTKFSNF 951 1000 ENSTTRP00000008647/1-801 IHEEHQSNGG ALVLHAYMDE LSFLSPMEME RFSEEFLALT FSENEKNAAY BACU002690/1-1392 IHEEHQSNGG ALVLHAYMDE LSFLSPMEME RFSEEFLALT FSENEKNAAY ENSP00000261441/1-802 IHEEHQSNGG ALVLHAYMDE LSFLSPMEME RFSEEFLALT FSENEKNAAY ENSBTAP00000026134/1-803 IHEEHQSNGG ALVLHAYMDE LSFLSPMEME RFSEEFLALT FSENEKNAAY bmy_17293T0/1-718 IHEEHQSNGG ALVLHAYMDE LSFLSPMEME RFSEEFLALT FSENEKNAAY 1001 1050 ENSTTRP00000008647/1-801 YALAIVHGAA AYLPDFLDYF AFNFPNTPVK MEILGKKDIE TTTISNFHTQ BACU002690/1-1392 YALAIVHGAA AYLPDFLDYF AFNFPNTPVK MEILGKKDIE TTTISNFHTQ ENSP00000261441/1-802 YALAIVHGAA AYLPDFLDYF AFNFPNTPVK MEILGKKDIE TTTISNFHTQ ENSBTAP00000026134/1-803 YALAIVHGAA AYLPDFLDYF AFNFPNTPVK MEILGKKDIE TTTISNFHTQ bmy_17293T0/1-718 YALAIVHGAA AYLPDFLDYF AFNFPNTPVK MEILGKKDIE TTTISNFHTQ 1051 1100 ENSTTRP00000008647/1-801 VNRTYCCGTY RAGPMRQISL VGAVDEEVGD YFPEFLDMLE ESPFLKMTLP BACU002690/1-1392 VNRTYCCGTY RAGPMRQISL VGAVDEEVGD YFPEFLDMLE ESPFLKMTLP ENSP00000261441/1-802 VNRTYCCGTY RAGPMRQISL VGAVDEEVGD YFPEFLDMLE ESPFLKMTLP ENSBTAP00000026134/1-803 VNRTYCCGTY RAGPMRQISL VGAVDEEVGD YFPEFLDMLE ESPFLKMTLP bmy_17293T0/1-718 VNRTYCCGTY RAGPMRQISL VGAVDEEVGD YFPEFLDMLE ESPFLKMTLP 1101 1150 ENSTTRP00000008647/1-801 WGTLSSLRLQ CRSQSDDGPI MWVRPGEQMI PTADMPKSPF KRRRXXXXXX BACU002690/1-1392 WGTLSSLRLQ CRSQSDDGPI MWVRPGEQMI PTADMPKSPF KRRRSMNEIK ENSP00000261441/1-802 WGTLSSLRLQ CRSQSDDGPI MWVRPGEQMI PTADMPKSPF KRRRSMNEIK ENSBTAP00000026134/1-803 WGTLSSLRLQ CRSQSDDGPI MWVRPGEQMI PTADMPKSPF KRRRSMNEIK bmy_17293T0/1-718 WGTLSSLRLQ CRSQSDDGPI MWVRPGEQMI PTADMPKSPF KRRRSMNEIK 1151 1200 ENSTTRP00000008647/1-801 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU002690/1-1392 NLQYLPRTSE PREVLFEDRT RAHADHVGQG FDWQSTAAVG VLKAVQFGEW ENSP00000261441/1-802 NLQYLPRTSE PREVLFEDRT RAHADHVGQG FDWQSTAAVG VLKAVQFGEW ENSBTAP00000026134/1-803 NLQYLPRTSE PREVLFEDRT RAHADHVGQG FDWQSTAAVG VLKAVQFGEW bmy_17293T0/1-718 NLQYLPRTSE PREVLFEDRT RAHADHVGQG FDWQSTAAVG VLKAVQFGEW 1201 1250 ENSTTRP00000008647/1-801 SDQPRITKDV ICFHAEDFTD VVQRLQLDLH EPPVSQCVQW VDEPKLNHMT BACU002690/1-1392 SDQPRITKDV ICFHAEDFTD VVQRLQLDLH EPPVSQCVQW VDEAKLNQMR ENSP00000261441/1-802 SDQPRITKDV ICFHAEDFTD VVQRLQLDLH EPPVSQCVQW VDEAKLNQMR ENSBTAP00000026134/1-803 SDQPRITKDV ICFHAEDFTD VVQRLQLDLH EPPVSQCVQW VDEAKLNQMR bmy_17293T0/1-718 SDQPRITKDV ICFHAEDFTD VVQRLQLDLH EPPVSQCVQW VDEAKLNQMR 1251 1300 ENSTTRP00000008647/1-801 REGIRYARIQ LCDNDIYFFP TNVIHQFKTV SAVCSLAWHI RLKQNHPVVE BACU002690/1-1392 REGIRYARIQ LCDNDIYFIP RNVIHQFKTV SAVCSLAWHI RLKQYHPVVE ENSP00000261441/1-802 REGIRYARIQ LCDNDIYFIP RNVIHQFKTV SAVCSLAWHI RLKQYHPVVE ENSBTAP00000026134/1-803 REGIRYARIQ LCDNDIYFIP RNVIHQFKTV SAVCSLAWHI RLKQYHPVVD bmy_17293T0/1-718 REGIRYARIQ LCDNDIYFIP RNVIHQFKTV SAVCSLAWHI RLKQYHPVVE 1301 1350 ENSTTRP00000008647/1-801 ASPNTESSSN VDYDLTGKRE LEVDSQCVRI KTESEETCTE MQLLTTASSS BACU002690/1-1392 ASQNTESSSN VDCDLTGKRE LEVDSQCVRI KTESEETCTE MQLLTTASSS ENSP00000261441/1-802 ATQNTESNSN MDCGLTGKRE LEVDSQCVRI KTESEEACTE IQLLTTASSS ENSBTAP00000026134/1-803 ASQNTEGSSN VDCDLTGKQE LEVDSQCVRI KTESEETCTE TQLLTTASSS bmy_17293T0/1-718 ASQNTESSSN VDCDLTGKRE LEVDSQCVRI KTESEETCTE MQLLTTASSS 1351 1400 ENSTTRP00000008647/1-801 FPPSSELNLQ QDQMTQPIPV LKVESRLDSD QQHNLQEHSS TPV BACU002690/1-1392 FPPSSELNLQ QDQMTQPIPV LKVESRLDSD QQHDLQEHSS TPV ENSP00000261441/1-802 FPPASELNLQ QDQKTQPIPV LKVESRLDSD QQHNLQEHST TSV ENSBTAP00000026134/1-803 FPPSSELNLQ QDQMTQSIPV LKVESRLDSD QQHSLQEHSS TPV bmy_17293T0/1-718 FPPSSELNLQ QDQMTQPIPV LKVESTLDSD QQHDLQEHSS TPV