KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:04 2014 Check: 00 .. Name: ENSP00000352833/1-807 Len: 811 Check: 9213 Weight: 1.00 Name: ENSBTAP00000026136/1-780 Len: 811 Check: 5824 Weight: 1.00 Name: bmy_17294T0/1-516 Len: 811 Check: 5217 Weight: 1.00 Name: ENSTTRP00000008710/1-808 Len: 811 Check: 4747 Weight: 1.00 // 1 50 ENSP00000352833/1-807 MDQREILQKF LDEAQSKKIT KEEFANEFLK LKRQSTKYKA DKTYPTTVAE ENSBTAP00000026136/1-780 MDQREILQKF LDEAQHRKSN KEEFANEFLT LKRLSSKYKA DKTYPTTVAE bmy_17294T0/1-516 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008710/1-808 MDQREILQKF LDDAQNKKSN KEEFANEFLT LKKLSTKYKA DKTYPTTEAE 51 100 ENSP00000352833/1-807 KPKNIKKNRY KDILPYDYSR VELSLITSDE DSSYINANFI KGVYGPKAYI ENSBTAP00000026136/1-780 RPKNIKKNRY KDILPYDHSL VELCMITSDE DSSYINANFI KGVYGPKTYI bmy_17294T0/1-516 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008710/1-808 RPKNIKKNRY KDILPYDHSR VELSMITSDE DSSYINANFI KGVLGPKAYI 101 150 ENSP00000352833/1-807 ATQGPLSTTL LDFWRMIWEY SVLIIVMACM EYEMGKKKCE RYWAEPGEMQ ENSBTAP00000026136/1-780 ATQGPLPTTV LDFWRMIWEY SILIIVMACM EFEMGKKKCE RYWAEPGDTQ bmy_17294T0/1-516 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008710/1-808 ATQGPLPTTV LDFWRMIWEY SVLIIVMACM EFEMGKKKCE RYWAEPGEMQ 151 200 ENSP00000352833/1-807 LEFGPFSVSC EAEKRKSDYI IRTLKVKFNS ETRTIYQFHY KNWPDHDVPS ENSBTAP00000026136/1-780 LQLGPFSISC EAENRKSDYT IRTLKAKFNS ETRTIYQFHY KNWPDHDVPS bmy_17294T0/1-516 ---------- ---------M LKSLMA---- ---------- ---------- ENSTTRP00000008710/1-808 LQLGPFSISC EAENKKSDYT IRTLQVKFNC EPRTIYQFHY KNWPDHDVPS 201 250 ENSP00000352833/1-807 SIDPILELIW DVRCYQEDDS VPICIHCSAG CGRTGVICAI DYTWMLLKDG ENSBTAP00000026136/1-780 SIDPILELIW DVRCYQDDNS VPICIHCSAG CGRTGVLCAI DYTWMLLKDG bmy_17294T0/1-516 ---------- ---------- ---------- ------IASL KNNLLLL--- ENSTTRP00000008710/1-808 SIDPILELIW DVRCYQEDNS VPICIHCSAG CGRTGVICAI DYTWMLLKDG 251 300 ENSP00000352833/1-807 IIPENFSVFS LIREMRTQRP SLVQTQEQYE LVYNAVLELF KRQMDVIRDK ENSBTAP00000026136/1-780 IIPENFSVFS LIQEMRTQRP SLVQTQQQYE LVYNAVLELF TRQMDIIGDK bmy_17294T0/1-516 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008710/1-808 IIPENFSVFS LIQEMRTQRP SLVQTQEQYE LVYNAVLELF KRQMDVIRDE 301 350 ENSP00000352833/1-807 HSGTESQAKH CIPEKNHTLQ ADSYSPNLPK STTKAAKMMN QQ---RTKME ENSBTAP00000026136/1-780 HSGTEIQAKD SVFEQNPNIE AKSYSPSLPK SNIKEATVMN QQSKGRIRVK bmy_17294T0/1-516 ---LKIQAKY SVSKQNPNQE ADSYSPNLPK SIIKEAKVMN QQSKGRIRVK ENSTTRP00000008710/1-808 HSGTEIQAKY SVSKQNPNPE ADSYSPNLPK SIVKEAKVMN QQSKGRIRVK 351 400 ENSP00000352833/1-807 IKESSSFDFR TSEISAKEEL VLHPAKSSTS FDFLELNYSF DKNADTTMKW ENSBTAP00000026136/1-780 SAEASSFDLR TSEINEKEGL VMHSAKQSSS LEFLELNCGC NKNADTTMKW bmy_17294T0/1-516 SAEASSFDLR ISEISEKEGL VMHPSKQSSS LEFLELNCGC NKNADTTMKW ENSTTRP00000008710/1-808 SAEASSFDLR IFEINEKEGL VMHPSKQSSS LEFLELNCGC NKNADTTMKW 401 450 ENSP00000352833/1-807 QTKAFPIVGE PLQKHQSLDL GSLLFEGCSN SKPVNAAGRY FNSKVPITRT ENSBTAP00000026136/1-780 ETKVFPIAGE PLQKHQSLDL SSILFGAYPK SKPVNAAGRY SNLKKPILRT bmy_17294T0/1-516 ERNVFPIGVE PLQKHQSLDL SSILFGVRPN SKPVNAAGRC FNLKGPIMRT ENSTTRP00000008710/1-808 ERKVFPIAGE PLQKHQSLDL SSILFGARPN SKPVNAAGRC FNLKRPIMRT 451 500 ENSP00000352833/1-807 KSTPFELIQQ RETKEVDSKE NFSYLESQPH DSCFVEMQAQ KVMHVSSAEL ENSBTAP00000026136/1-780 KSTPFELMQE RDSKELDIKG NF-YLESQPH NSCVD--QAQ KVMHVSTAEL bmy_17294T0/1-516 KSTPFELMQQ RDTKELDVEE NF-YLESHPH NSCLE--XAR KVMHVSSAEL ENSTTRP00000008710/1-808 KSTPFELMQQ RDTKELDVEE DF-YLESHSH NSCLE--QAQ KVMHVSSAEL 501 550 ENSP00000352833/1-807 NYSLPYDSKH QIRNASNVKH HDSSALGVYS YIPLVENPYF SSWPPSGTSS ENSBTAP00000026136/1-780 NFSPLHDSKH QTCNAANAKQ HDSGALNEHS YMSLVEDPYF SSLSPSSAHS bmy_17294T0/1-516 NYSPSYDSKH QMCNASNAKQ HDSGAFKVLS YMSLVEDPYF SSLSPSSAGS ENSTTRP00000008710/1-808 NYSPSYDSKH QMCNASKAKQ HDSGAFKVLS YMSLVEDPYF SSLSPSSAGS 551 600 ENSP00000352833/1-807 KMSLDLPEKQ DGTVFPSSLL PTSSTSLFSY YNSHDSLSLN SPTNISSLLN ENSBTAP00000026136/1-780 KTSFNLPQKQ DGSVLPCSSL SKSSTTLFPY YNSHDSLTLS TLTNFPPPLN bmy_17294T0/1-516 KMSLDLPEKQ DETVLPCSSL PKSSTTLFPY YNSCDSLALN PPTNFPPPLN ENSTTRP00000008710/1-808 KMSLDSPEKQ DKTVLPCSSL PKSSTTLFPY YNSHDSSALN PPTNFPPALN 601 650 ENSP00000352833/1-807 QESAVLATAP RIDDEIPPPL PVWTPESFIV VEEAGEFSPN VPKSLSSAVK ENSBTAP00000026136/1-780 QETAAV---- ---------- ---------- ----GELPQG VPTSSSSPVK bmy_17294T0/1-516 QETAVVATSP RINDEIPPPL PERTPESFIV VEEAGEFPLD VPKSLSSAVK ENSTTRP00000008710/1-808 QETAVVATSP RIDDEIPPPL PERTPESFIV VEETGESPLD IPNSLTSAVK 651 700 ENSP00000352833/1-807 VKIGTSLEWG GTSEPKKFDD SVILRPSKSV KLRSPKSELH QDR-SSPPPP ENSBTAP00000026136/1-780 VKIGTSLECS GTSESKKSDD LVRLRPSKSV KPRSPKSDLQ QDRSSSPPPP bmy_17294T0/1-516 VKIRTSLECS RTSESKKFDD L-------SV KPQSPKSDRH QDRSSSLPPP ENSTTRP00000008710/1-808 VKIGTSLECS RTFESKKFDD LVRLRPSKSV KPQSPKSDRH QDPSSSLPPP 701 750 ENSP00000352833/1-807 LPERTLESFF LADEDCMQAQ SIETYSTSYP DTMENSTSSK QTLKTPGKSF ENSBTAP00000026136/1-780 LPERTLESFL LADEDCTQAQ PVETCSTSCP NTMENSTSSK QTLKPPGKNF bmy_17294T0/1-516 LPERTLESFL VADEDCMQAH PIETYSTSCP NTMENSTSSK QTLKTPGKCF ENSTTRP00000008710/1-808 LPERTLESFL VADEDCMQTQ PIETYSTSCP NTMENSTSSK QTLKTPGKCF 751 800 ENSP00000352833/1-807 TRSKSLKILR NMKKSICNSC PPNKPAESVQ SNNSSSFLNF GFANRFSKPK ENSBTAP00000026136/1-780 TRSKSLKILR NVKKSICNSS PPNKPAETAR SKNSSSFLNF GFANRFSKPK bmy_17294T0/1-516 TRSKSLKILR NMKKSICNSS PSNKPADSVQ SNNSSSFLNF GFANRFSKPK ENSTTRP00000008710/1-808 TRSKSLKILR NMKKSICNSS PSNNPADSVR SNNSSSFLNF GFANRFSKPK 801 850 ENSP00000352833/1-807 GPRNPPPTWN I ENSBTAP00000026136/1-780 GPRNPPSTWK I bmy_17294T0/1-516 GPRNPPSTWN I ENSTTRP00000008710/1-808 GPRNPPSTWN I