KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:10 2014 Check: 00 .. Name: ENSTTRP00000007594/1-627 Len: 631 Check: 8894 Weight: 1.00 Name: ENSP00000320869/1-630 Len: 631 Check: 9306 Weight: 1.00 Name: bmy_20580T0/1-630 Len: 631 Check: 7180 Weight: 1.00 Name: ENSBTAP00000026179/1-535 Len: 631 Check: 976 Weight: 1.00 // 1 50 ENSTTRP00000007594/1-627 MAAVAMAPNP VQTLQEEAVC AICLDYFTDP VSIGCGHNFC RVCVTQLWGG ENSP00000320869/1-630 MAAVAMTPNP VQTLQEEAVC AICLDYFTDP VSIGCGHNFC RVCVTQLWGG bmy_20580T0/1-630 MAAVAMAPNP VQTLQEEAVC AICLDYFTDP VSIGCGHNFC RVCVTQLWGG ENSBTAP00000026179/1-535 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007594/1-627 EDEEDRDELD REEEEEDGEE EEVEAVGAGG GWDTPMRDED YEGDMEEEVE ENSP00000320869/1-630 EDEEDRDELD REEEEEDGEE EEVEAVGAGA GWDTPMRDED YEGDMEEEVE bmy_20580T0/1-630 EDEEDRDELD REEEEEDGEE EEVEAVGAGG GWDTPMRDED YEGDMEEEVE ENSBTAP00000026179/1-535 ---------- ---------- ---------- ---------- ----MEEEVE 101 150 ENSTTRP00000007594/1-627 EEEEGVFWTS GMGGSNWENM DYVWEEEDEE EDLDYYLGNV -EGDLRGEDE ENSP00000320869/1-630 EEEEGVFWTS GMSRSSWDNM DYVWEEEDEE EDLDYYLGDM EEEDLRGEDE bmy_20580T0/1-630 EEEEGVFWTS GMGGSNWENM DYVWEEEDEE EDLDYYLGNV -EGDLRGEDE ENSBTAP00000026179/1-535 EEEEGVFWTS GMGGSNWDNM DYVWEEEEEE EDLDYYLGDM -EEDLRGEEE 151 200 ENSTTRP00000007594/1-627 EDEEEVLEED EEEELDPVTP LPPPPAPRRC FTCPQCRKSF PRRSFRPNLQ ENSP00000320869/1-630 EDEEEVLEEV EEEDLDPVTP LPPPPAPRRC FTCPQCRKSF PRRSFRPNLQ bmy_20580T0/1-630 EDEEEVLEED EEEELDPVTP LPPPPAPRRC FTCPQCRKSF PRRSFRPNLQ ENSBTAP00000026179/1-535 EDEEEVLEED EEEELDPVTP LPPPPTPRRC FTCPQCRKSF PRRSFRPNLQ 201 250 ENSTTRP00000007594/1-627 LANMVQVIRQ MHPTPGRGSR GNEQGICPKH QEAXXXXXXX XXXXXXXXXX ENSP00000320869/1-630 LANMVQVIRQ MHPTPGRGSR VTDQGICPKH QEALKLFCEV DEEAICVVCR bmy_20580T0/1-630 LANMVQVIRQ MHPTPGRGSR GNEQGICPKH QEALKLFCEV DEEAICVVCR ENSBTAP00000026179/1-535 LANMVQVIRQ MHPTAGRGSR GNEQGICPKH QEALKLFCEV DEEAICVVCR 251 300 ENSTTRP00000007594/1-627 XXXXXXQHSV VP---EVHEY KAKLQGHVEP LRKHLEAVQK MKAKEERRVT ENSP00000320869/1-630 ESRSHKQHSV VPLEEVVQEY KAKLQGHVEP LRKHLEAVQK MKAKEERRVT bmy_20580T0/1-630 ESRSHKQHSV VPLEEVVQEY KAKLQGHVEP LRKHLEAVQK MKAKEERRVT ENSBTAP00000026179/1-535 ESRNHKQHSV VPLEEVVQEY KAKLQGHVEP LRKHLEAVQK MKAKEERRVT 301 350 ENSTTRP00000007594/1-627 ELKSQMKSEL AAVASEFGRL TRFLAEEQAG LERRLREMHE AQLGRAGAAA ENSP00000320869/1-630 ELKSQMKSEL AAVASEFGRL TRFLAEEQAG LERRLREMHE AQLGRAGAAA bmy_20580T0/1-630 ELKSQMKSEL AAVASEFGRL TRFLAEEQAG LERRLREMHE AQLGRAGAAA ENSBTAP00000026179/1-535 ELKSQMKSEL AAVASEFGRL TRFLAEEQAG LERRLREMHE AQLGRAGAAA 351 400 ENSTTRP00000007594/1-627 SRLSEHAAQL SRLLADAQER SQQGGLRLLQ XXXXXXXXXX XXXXXXXXXX ENSP00000320869/1-630 SRLAEQAAQL SRLLAEAQER SQQGGLRLLQ DIKETFNRCE EVQLQPPEVW bmy_20580T0/1-630 SRLSEQAAQL SRLLAEAQER SQQGGLRLLQ DIKETFNRCE EVQLQPPEVW ENSBTAP00000026179/1-535 SRLSEQAAQL SRLLAEAQER SQQGGLRLLQ DIKETFNRCE EVQLQPPEVW 401 450 ENSTTRP00000007594/1-627 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XDLTLDPDTA HPALMLSPDR ENSP00000320869/1-630 SPDPCQPHSH DFLTDAIVRK MSRMFCQAAR VDLTLDPDTA HPALMLSPDR bmy_20580T0/1-630 SPDPCQPHSH DFLTDAIVRK MSRMFCQAAR VDLTLDPDTA HPALMLSPDR ENSBTAP00000026179/1-535 SPDPCQPHSH DFLTDAIVRK MSRMFCQAAR VDLTLDPDTA HPALMLSPDR 451 500 ENSTTRP00000007594/1-627 RGVRLAERRQ EVADHSKRFS ADCCVLGAQG FRSGRHYWEV EVGGRRGWAV ENSP00000320869/1-630 RGVRLAERRQ EVADHPKRFS ADCCVLGAQG FRSGRHYWEV EVGGRRGWAV bmy_20580T0/1-630 RGVRLAERRQ EVADHSKRFS ADCCVLGAQG FRSGRHYWEV EVGGRRGWAV ENSBTAP00000026179/1-535 RAVRLAERRQ EVADHSKRFS ADCCVLGAQG FRSGRHYWEV EVGGRRGWAV 501 550 ENSTTRP00000007594/1-627 GAARESTHHK EKVGSGGSSV GSGDASSSSR HHHRRRRLHL PQQPLLQREV ENSP00000320869/1-630 GAARESTHHK EKVGPGGSSV GSGDA-SSSR HHHRRRRLHL PQQPLLQREV bmy_20580T0/1-630 GAARESTHHK EKVGSGGSSV GSGDASSSSR HHHRRRRLHL PQQPLLQREV ENSBTAP00000026179/1-535 GAARESTHHK EKVGSGGSSV GSGDA-SSSR HHHRRRRLHL PQQPLLQREV 551 600 ENSTTRP00000007594/1-627 WCVGTNGKRY QAQSSTEQTL LSPSEKPRRF GVYLDYEAGR LGFYNAETLA ENSP00000320869/1-630 WCVGTNGKRY QAQSSTEQTL LSPSEKPRRF GVYLDYEAGR LGFYNAETLA bmy_20580T0/1-630 WCVGTNGKRY QAQSSTEQTL LSPSEKPRRF GVYLDYEAGR LGFYNAETLA ENSBTAP00000026179/1-535 WCVGTNGKRY QAQSSTEQTL LSPSEKPRRF GVYLDYEAGR LGFYNAETLA 601 650 ENSTTRP00000007594/1-627 HVHTFSAAFL GERVFPFFRV LSKGTRIKLC P ENSP00000320869/1-630 HVHTFSAAFL GERVFPFFRV LSKGTRIKLC P bmy_20580T0/1-630 HVHTFSAAFL GERVFPFFRV LSKGTRIKLC P ENSBTAP00000026179/1-535 HVHTFSAAFL GERVFPFFRV LSKGTRIKLC P