KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:11 2014 Check: 00 .. Name: ENSTTRP00000007595/1-346 Len: 1173 Check: 9394 Weight: 1.00 Name: BACU004876/1-1076 Len: 1173 Check: 8874 Weight: 1.00 Name: bmy_20581T0/1-382 Len: 1173 Check: 8693 Weight: 1.00 Name: ENSP00000426909/1-317 Len: 1173 Check: 728 Weight: 1.00 Name: ENSBTAP00000026183/1-317 Len: 1173 Check: 728 Weight: 1.00 // 1 50 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 MFFFPRPPEG AIKDLRAGPR LSRPDPGEGR VLRSDGGRRW HEAPAPQLKT bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 DSTRTGTLGQ RVRLPIRRPQ SPGSVRDRRS PPPPLLLLLL LGLVREGAAE bmy_20581T0/1-382 ---------- ---------- -PFCSRGRIF PVPARSCSLF F--------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 SPWGLPLVAD SPAARAKVVM AELAHLKLEK KPWPARTHSL HYYYLALSEP bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 GPSLPKFLAV GYVDDQPFIR FDSRVGKAEP QAPWMTPMDA QYWETETKKQ bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 EKWAEVQQVE MWTVMGYHNH SSGMHSTQRM FGCEIQEDGR YRGFWQFGYD bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 GQDHLSLDLE TLSWVSAEPV ATRTKHWWET ERCYAEYDKA YLEGPCLASL bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 HRYLELGGQR FSRREPPAVR ITKHSAKDGG TTLRCWALGF YPHDILLSWW bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 LGEKELDSEY VETRPSGDGT YQTWAAVWVP AGEKAQYTCH VQHSSLNHTL bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 TVSWESSHPG LIAMVISLIL VLLVVVGGVI LTKCIQDWSK SGAPAKTEAK bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 EDDSTSTCQP VAACQWFQPK SGAMGPTGPA QMPASLLGSF LSHPYQRVKM bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 AGYAAAPNAL QTLQEEAVCA ICLDYFKDPV SIGCGHNFCR GCVTQLWGKE bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 DDEEVRDEEE DEWEEDDEAV GAIGGWGNSI REVVYQGNAD EELLQDQEGD bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 ELWDGDGGVR DWDDVDYVWD QEEEEEDTDY YLGGVRHDLR ADVYPEEEEE bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 ILEEYDEDAQ ELYPDTHRPP PPAHPRQFTC PQCQKSFTSR SFRLNLQLAN bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 RVQIIRQMCP TPNRGSQGND QGICSKHQEA LKLFCEVDNE AICVVCRESG bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000007595/1-346 ---------- ---------- ---------- ---------- ---------- BACU004876/1-1076 SHKQHSVVPM EEVVQEYKIL TEGGEEVLES WKGKQCVLAV LKRDDEVRDP bmy_20581T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000007595/1-346 ---------- -----RGRSV CVGRLSELSS SILVAAATPA SAAVMTEQMT BACU004876/1-1076 KNNRAEEETV RAKGPRRERV CVGRLSEPSS SILVAAATPA PAAVMTEQMT bmy_20581T0/1-382 ---------- -SAGPRRERV CAGRLSEPSS SILVAAATPA PAAVMTEQMT ENSP00000426909/1-317 ---------- ---------- ---------- ---------- ----MTEQMT ENSBTAP00000026183/1-317 ---------- ---------- ---------- ---------- ----MTEQMT 851 900 ENSTTRP00000007595/1-346 LRGTLKGHNG WVTQIATTPQ FPDMILSASR DKTIIMWKLT RDETNYGIPQ BACU004876/1-1076 LRGTLKGHNG WVTQIATTPQ FPDMILSASR DKTIIMWKLT RDETNYGIPQ bmy_20581T0/1-382 LRGTLKGHNG WVTQIATTPQ FPDMILSASR DKTIIMWKLT RDETNYGIPQ ENSP00000426909/1-317 LRGTLKGHNG WVTQIATTPQ FPDMILSASR DKTIIMWKLT RDETNYGIPQ ENSBTAP00000026183/1-317 LRGTLKGHNG WVTQIATTPQ FPDMILSASR DKTIIMWKLT RDETNYGIPQ 901 950 ENSTTRP00000007595/1-346 RALRGHSHFV SDVVISSDGQ FALSGSWDGT LRLWDLTT-- ---------- BACU004876/1-1076 RALRGHSHFV SDVVISSDGQ FALSGSWDGT LRLWDLTT-- ---------- bmy_20581T0/1-382 RALRGHSHFV SDVVISSDGQ FALSGSWDGT LRLWDLTTQV AALGHWGKAG ENSP00000426909/1-317 RALRGHSHFV SDVVISSDGQ FALSGSWDGT LRLWDLTT-- ---------- ENSBTAP00000026183/1-317 RALRGHSHFV SDVVISSDGQ FALSGSWDGT LRLWDLTT-- ---------- 951 1000 ENSTTRP00000007595/1-346 GTTTRRFVGH TKDVLSVAFS SDNRQIVSGS RDKTIKLWNT LGVCKYTVQD BACU004876/1-1076 ---------- ---------- ---------- ---------- --------QD bmy_20581T0/1-382 GTTTRRFVGH TKDVLSVAFS SDNRQIVSGS RDKTIKLWNT LGVCKYTVQD ENSP00000426909/1-317 GTTTRRFVGH TKDVLSVAFS SDNRQIVSGS RDKTIKLWNT LGVCKYTVQD ENSBTAP00000026183/1-317 GTTTRRFVGH TKDVLSVAFS SDNRQIVSGS RDKTIKLWNT LGVCKYTVQD 1001 1050 ENSTTRP00000007595/1-346 ESHSEWVSCV RFSPNSSNPI IVSCGWDKLV KXXXXXXXXX XXXXXXXXXX BACU004876/1-1076 ESHSEWVSCV RFSPNSSNPI IVSCGWDKLV ---------- ---------- bmy_20581T0/1-382 ESHSEWVSCV RFSPNSSNPI IVSCGWDKLV KVWNLANCKL KTNHIGHTGY ENSP00000426909/1-317 ESHSEWVSCV RFSPNSSNPI IVSCGWDKLV KVWNLANCKL KTNHIGHTGY ENSBTAP00000026183/1-317 ESHSEWVSCV RFSPNSSNPI IVSCGWDKLV KVWNLANCKL KTNHIGHTGY 1051 1100 ENSTTRP00000007595/1-346 XXXXXXXXXX XXXXXXXXDG QAMLWDLNEG KHLYTLDGGD IINALCFSPN BACU004876/1-1076 ---------- -------KDG QAMLWDLNEG KHLYTLDGGD IINALCFSPN bmy_20581T0/1-382 LNTVTVSPDG SLCASGGKDG QAMLWDLNEG KHLYTLDGGD IINALCFSPN ENSP00000426909/1-317 LNTVTVSPDG SLCASGGKDG QAMLWDLNEG KHLYTLDGGD IINALCFSPN ENSBTAP00000026183/1-317 LNTVTVSPDG SLCASGGKDG QAMLWDLNEG KHLYTLDGGD IINALCFSPN 1101 1150 ENSTTRP00000007595/1-346 RYWLCAATGP SIKIWDLEGK IIVDELKQEV ISTSSKAEPP QCTSLAWSAD BACU004876/1-1076 RYWLCAATGP SIKIWDLEGK IIVDELKQEV ISTSSKAEPP QCTSLAWSAD bmy_20581T0/1-382 RYWLCAATGP SIKIWDLEGK IIVDELKQEV ISTSSKAEPP QCTSLAWSAD ENSP00000426909/1-317 RYWLCAATGP SIKIWDLEGK IIVDELKQEV ISTSSKAEPP QCTSLAWSAD ENSBTAP00000026183/1-317 RYWLCAATGP SIKIWDLEGK IIVDELKQEV ISTSSKAEPP QCTSLAWSAD 1151 1200 ENSTTRP00000007595/1-346 GQTLFAGYTD NLVRVWQVTI GTR BACU004876/1-1076 GQTLFAGYTD NLVRVWQVTI GTR bmy_20581T0/1-382 GQTLFAGYTD NLVRVWQVTI GTR ENSP00000426909/1-317 GQTLFAGYTD NLVRVWQVTI GTR ENSBTAP00000026183/1-317 GQTLFAGYTD NLVRVWQVTI GTR