KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:12 2014 Check: 00 .. Name: ENSTTRP00000003140/1-428 Len: 487 Check: 6155 Weight: 1.00 Name: BACU017455/1-427 Len: 487 Check: 2702 Weight: 1.00 Name: ENSP00000365730/1-443 Len: 487 Check: 9568 Weight: 1.00 Name: bmy_18207T0/1-467 Len: 487 Check: 7380 Weight: 1.00 Name: ENSBTAP00000026195/1-423 Len: 487 Check: 5681 Weight: 1.00 // 1 50 ENSTTRP00000003140/1-428 ---------- ------PVQS GLPGIQNLKA DPEELFTKLE KIGKGSFGEV BACU017455/1-427 ---------- ---------M RKDKSANLKA DPEELFTKLE KIGKGSFGEV ENSP00000365730/1-443 MDSRAQLWGL ALNKRRATLP HPGGSTNLKA DPEELFTKLE KIGKGSFGEV bmy_18207T0/1-467 ---------- ---------M RKDKSANLKA DPEELFTKLE KIGKGSFGEV ENSBTAP00000026195/1-423 ---------- ---------- --PGIQNLKA DPEELFTKLE KIGKGSFGEV 51 100 ENSTTRP00000003140/1-428 FKGIDNRTQK VVAIKIIDLE EAEDEIEDIQ QEITVLSQCD SPYVTKYYGS BACU017455/1-427 FKGIDNRTQK VVAIKIIDLE EAEDEIEDIQ QEITVLSQCD SPYVTKYYGS ENSP00000365730/1-443 FKGIDNRTQK VVAIKIIDLE EAEDEIEDIQ QEITVLSQCD SPYVTKYYGS bmy_18207T0/1-467 FKGIDNRTQK VVAIKIIDLE EAEDEIEDIQ QEITVLSQCD SPYVTKYYGS ENSBTAP00000026195/1-423 FKGIDNRTQK VVAIKIIDLE EAEDEIEDIQ QEITVLSQCD SPYVTKYYGS 101 150 ENSTTRP00000003140/1-428 YLK------- ---------- ---------- ---------- ----XXXXXX BACU017455/1-427 YLK------- ---------- ---------- ---------- ----EHGKWQ ENSP00000365730/1-443 YLK------- ---------- ---------- ---------- ----DTKLWI bmy_18207T0/1-467 YLKVLLSPRL GPTPGSCDSP VIGGLTSALE TGSPRGPAAE STEPDTKLWI ENSBTAP00000026195/1-423 YLK------- ---------- ---------- ---------- ----DTKLWI 151 200 ENSTTRP00000003140/1-428 -XXXXXXXXX XXXXLEPGPL DETQIATILR EILKGLDYLH SEKKIHRDIK BACU017455/1-427 EAVGRRGAPG GLDSLEPGPL DETQIATILR EILKGLDYLH SEKKIHRDIK ENSP00000365730/1-443 -IMEYLGGGS ALDLLEPGPL DETQIATILR EILKGLDYLH SEKKIHRDIK bmy_18207T0/1-467 -IMEYLGGGS ALDLLEPGPL DETQIATILR EILKGLDYLH SEKKIHRDIK ENSBTAP00000026195/1-423 -IMEYLGGGS ALDLLEPGPL DETQIATILR EILKGLDYLH SEKKIHRDIK 201 250 ENSTTRP00000003140/1-428 AANVLLSEHG EVKLADFGVA GQLTDTQIKR NTFVGTPFWM APEVIKQSAY BACU017455/1-427 AANVLLSEHG EVKLADFGVA GGVTDTQIKR NTFVGTPFWM APEVIKQSAY ENSP00000365730/1-443 AANVLLSEHG EVKLADFGVA GQLTDTQIKR NTFVGTPFWM APEVIKQSAY bmy_18207T0/1-467 AANVLLSEHG EVKLADFGVA GQLTDTQIKR NTFVGTPFWM APEVIKQSAY ENSBTAP00000026195/1-423 AANVLLSEHG EVKLADFGVA GQLTDTQIKR NTFVGTPFWM APEVIKQSAY 251 300 ENSTTRP00000003140/1-428 DS-ADIWSLG ITAIELAKGE PPHSELHPMK VLFLIPKNNP PTLEGNYSKP BACU017455/1-427 DSKADVWSLG ITAIELAKGE PPHSELHPMK VLFLIPKNNP PTLEGNYSKP ENSP00000365730/1-443 DSKADIWSLG ITAIELARGE PPHSELHPMK VLFLIPKNNP PTLEGNYSKP bmy_18207T0/1-467 DSKADIWSLG ITAIELAKGE PPHSELHPMK VLFLIPKNNP PTLEGNYSKP ENSBTAP00000026195/1-423 DSKADIWSLG ITAIELAKGE PPHSELHPMK VLFLIPKNNP PTLEGNYSKP 301 350 ENSTTRP00000003140/1-428 LKEFVEACLN KEPSFRPTAK ELLKHKFIIR NAKKTSYLTE LIDRYKRWKA BACU017455/1-427 LKEFVEACLN KEPSFRPTAK ELLKHKFIIR NAKKTSYLTE LIDRYKRWKA ENSP00000365730/1-443 LKEFVEACLN KEPSFRPTAK ELLKHKFILR NAKKTSYLTE LIDRYKRWKA bmy_18207T0/1-467 LKEFVEACLN KEPSFRPTAK ELLKHKFIIR NAKKTSYLTE LIDRYKRWKA ENSBTAP00000026195/1-423 LKEFVEACLN KEPSFRPTAK ELLKHKFIIR NAKKTSYLTE LIDRYKRWKA 351 400 ENSTTRP00000003140/1-428 EQSHEDSSSE DSDTETDTDG QASGGSDSGD WIFTIREKDP KSLENGALQP BACU017455/1-427 EQSHEDSSSE DSDTETDTDG QASGGSDSGD WIFTIREKDP KSLENGALQP ENSP00000365730/1-443 EQSHDDSSSE DSDAE--TDG QASGGSDSGD WIFTIREKDP KNLENGALQP bmy_18207T0/1-467 EQSHEDSSSE DSDTETDTDG QASGGSDSGD WIFTIREKDP KSLENGALQP ENSBTAP00000026195/1-423 EQSHEDSSSE DSDTETDTDG QASGGSDSGD WIFTIREKDP KSLENGALQP 401 450 ENSTTRP00000003140/1-428 SDLERNKMKD IPKRPFSQCL STIISPLFAE LKEKSQACGG NLRSIEELRG BACU017455/1-427 SDLERNKMKD IPKRPFSQCL STIISPLFAE LKEKSQACGG NLGSIEELRG ENSP00000365730/1-443 SDLDRNKMKD IPKRPFSQCL STIISPLFAE LKEKSQACGG NLGSIEELRG bmy_18207T0/1-467 SDLERNKMKD IPKRPFSQCL STIISPLFAE LKEKSQACGG NLGSIEELRG ENSBTAP00000026195/1-423 SDLERNKMKD IPKRPFSQCL STIISPLFAE LKEKSQACGG NLGSIEELRG 451 500 ENSTTRP00000003140/1-428 AIYLAEEACP GISDTMVAQL VQRLQRYSLS GGGTSSH BACU017455/1-427 AIYLAEEACP GISDTMVAQL VQRLQRYSLS GGGTSSH ENSP00000365730/1-443 AIYLAEEACP GISDTMVAQL VQRLQRYSLS GGGTSSH bmy_18207T0/1-467 AIYLAEEACP GISDTMVAHL VQRLQRYSLS GGGTSSH ENSBTAP00000026195/1-423 AIYLAEEACP GISDTMVAQL VQRLQRYSLS GGGTSSH