KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:28:14 2014  Check: 00 ..

 Name: ENSP00000259206/1-180     Len:    205  Check:  240  Weight:  1.00
 Name: ENSBTAP00000026209/1-174  Len:    205  Check:  6329  Weight:  1.00
 Name: bmy_09035T0/1-178         Len:    205  Check:  771  Weight:  1.00
 Name: BACU017764/1-177          Len:    205  Check:  9711  Weight:  1.00
 Name: ENSTTRP00000011234/1-182  Len:    205  Check:  726  Weight:  1.00

//


                          1                                                   50
ENSP00000259206/1-180     -MALADLYEE GGGGGGEGED NA-------- --------DS K-------ET 
ENSBTAP00000026209/1-174  ---------- ------MDIY IH------GY LICLLLFLFR S-------ET 
bmy_09035T0/1-178         ---------- ----MSPGRR NHILHLMPGT WVVPLTPTRE RRSEKREPKT 
BACU017764/1-177          ---------- ----MEVCRC HH------GY LISLLLFLFH S-------ET 
ENSTTRP00000011234/1-182  METHANVCEG GGGGEEEGKS SH------G- ---------S R-------ET 


                          51                                                 100
ENSP00000259206/1-180     ICRPSGRKSS KMQAFRIWDV NQKTFYLRNN QLVAGYLQGP NVNLEEKIDV 
ENSBTAP00000026209/1-174  ACHPLGKRRC EMQAFRIWDV NQKIFYLRNN QLVAGYLQGP NTKLEEKIDV 
bmy_09035T0/1-178         ACYPLGKRPF EMQAFRIWDV NQKTFYLRNN QLVAGHLQGP NTKLEEKIDV 
BACU017764/1-177          ACYPLGKRPC EMQAFRIWDV TQKTFYLRNN QLVAGYLQGP NTKLEEKIDV 
ENSTTRP00000011234/1-182  ACYPLGKRPC EMQAFRIWDV NQKTFYLRNN QLVAGYLQGP NTKLEEKIDV 


                          101                                                150
ENSP00000259206/1-180     VPIEPHALFL GIHGGKMCLS CVKSGDETRL QLEAVNITDL SENRKQDKRF 
ENSBTAP00000026209/1-174  VPIEPHTMFL GIHGGKLCLA CVKSGDEIKL KLEAVNITDL NQNREQDKRF 
bmy_09035T0/1-178         VPVEPSAMFL GIHGGKLCLA C--------- ---PVNITDL SRNKEEDKRF 
BACU017764/1-177          VPIEPHAMFL GIHGGKLCLA CVKSGNEIKL GLEPVNITDL SRNNEEDKRF 
ENSTTRP00000011234/1-182  VPIEPHAMFL GIHGGKLCLA CVKSGDEIKL GLEPVNITDL NSSKEEDKRF 


                          151                                                200
ENSP00000259206/1-180     AFIRSDSGPT TSFESAACPG WFLCTAMEAD QPVSLTNMPD EGVMVTKFYF 
ENSBTAP00000026209/1-174  AFIRFDNGPT TSFESAACPG WFLCTSLEAD QPVGLTNMPT EALKVTKFYF 
bmy_09035T0/1-178         AFIRSDSGPT TSFESAACPG WFLCTALETD QPVGLTNTPH DAVQVTKFYF 
BACU017764/1-177          AFIRSDSGPT TSFESAACPG WFLCTALETD QPVGLTNAPQ DAVQVTKFYF 
ENSTTRP00000011234/1-182  AFIRSDSGPT TSFESAACPG WFLCTALETD QPVGLTNTPQ DAVQVTKFYF 


                          201                                                250
ENSP00000259206/1-180     QEDE- 
ENSBTAP00000026209/1-174  QQD-- 
bmy_09035T0/1-178         QQDQ- 
BACU017764/1-177          QQDQ- 
ENSTTRP00000011234/1-182  QQDQR