KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:14 2014 Check: 00 .. Name: ENSP00000306396/1-126 Len: 340 Check: 3401 Weight: 1.00 Name: ENSBTAP00000026211/1-235 Len: 340 Check: 9584 Weight: 1.00 Name: bmy_20268T0/1-231 Len: 340 Check: 2463 Weight: 1.00 Name: ENSTTRP00000000310/1-105 Len: 340 Check: 4973 Weight: 1.00 // 1 50 ENSP00000306396/1-126 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026211/1-235 LALPAGPGEA ACALCQSAPR DPVRADCGHR FCRACVVRFW AEEDGPFPCP bmy_20268T0/1-231 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000310/1-105 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000306396/1-126 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026211/1-235 ECADDCWQRA VEPSRPPLSR RLLALEEAAA APTRDGPASE AALQLLCRAD bmy_20268T0/1-231 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000310/1-105 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000306396/1-126 ---------M AAGPEPPEWE PRWRKALRGK ---------- ---------E ENSBTAP00000026211/1-235 GGPLCAACRM AAGPEPPEWE PRWRKALRGK ---------- ---------E bmy_20268T0/1-231 ---------M AAGPEPPEWE PRWRKALRGK LGPRPSEVAT HPITSISFQE ENSTTRP00000000310/1-105 ---------- ---------- ---------- ---------- ---------E 151 200 ENSP00000306396/1-126 NKGSVEIMRK DLNDARDLHG QAESAAAVWK ---GHVMDRR KKALTDYKKL ENSBTAP00000026211/1-235 NKGSVEIMKK DLNDARDLHG QAESAAAVWK ---GHVMDRR KKALTDYKKL bmy_20268T0/1-231 NKGSVEIMRK DLNDARDLHG QAESAAAVWK ASGGHVMDRR KKALTDYKKL ENSTTRP00000000310/1-105 NKGSVEIMRK DLNDARDLHG QAESAAAVWK ---GHVMDRR KKALTDYKKL 201 250 ENSP00000306396/1-126 RAFFVEEEEH FLQEAEKEEG LPEDELADPT ERFRSLLQAV SELEKKHRNL ENSBTAP00000026211/1-235 RAFFAEEEGR FLQEAEKEEG SLEDEDEDPA ERFRSLLQAV SELERRHRNL bmy_20268T0/1-231 RAFFAEEEGR FLQEAEKEEG SLDDEDEDPA ERFRSLLQAV SELERRHRNL ENSTTRP00000000310/1-105 RAFFAEEEGR FLQEAEKEEG SLDDEDEDPA ERFRSLLQAV SELERRHRNL 251 300 ENSP00000306396/1-126 GLSMLLQ--- ---------- ---------- ---------- ---------- ENSBTAP00000026211/1-235 GLSMLLQ--- ---------- ---------- ---------- ---------- bmy_20268T0/1-231 GLSMLLQVFM FLGYKHFTVE ICIGGYKNPR LIQPSLDSPL RPSPGLRIDA ENSTTRP00000000310/1-105 GLSMLLQ--- ---------- ---------- ---------- ---------- 301 350 ENSP00000306396/1-126 ---------- ---------- ---------- ---------- ENSBTAP00000026211/1-235 ---------- ---------- ---------- ---------- bmy_20268T0/1-231 VSPPSGQKPL RRRVRIAGDG SPYQTKPRSK SSPDLAENTN ENSTTRP00000000310/1-105 ---------- ---------- ---------- ----------