KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:16 2014 Check: 00 .. Name: ENSP00000294353/1-744 Len: 779 Check: 6921 Weight: 1.00 Name: ENSTTRP00000002530/1-681 Len: 779 Check: 6883 Weight: 1.00 Name: ENSBTAP00000026228/1-744 Len: 779 Check: 6652 Weight: 1.00 Name: bmy_09995T0/1-664 Len: 779 Check: 4221 Weight: 1.00 Name: BACU000261/1-628 Len: 779 Check: 7124 Weight: 1.00 // 1 50 ENSP00000294353/1-744 MPEDQAGAAM EEASPYSLLD ICLNFLTTHL EKFCSARQDG TLCLQEPGVF ENSTTRP00000002530/1-681 MPEDQAGAAM EEASPYSLLD ICLNFLTTHL EKFCSARQDG TLCLQEPGVF ENSBTAP00000026228/1-744 MPEDQAGAAM EEASPYSLLD ICLNFLTTHL EKFCSARQDG TLCLQEPGVF bmy_09995T0/1-664 ---------- ---------- ---------- ---------- ---------- BACU000261/1-628 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000294353/1-744 PQEVADRLLR TMAFHGLLND GTVGIFRGNQ MRLKRACIRK AKISAVAFRK ENSTTRP00000002530/1-681 PQEVADRLLQ TMAFHGLLND ATVGIFRGNQ MRLKRACIRK AKISAVAFRK ENSBTAP00000026228/1-744 PQEVADRLLQ TMAFHGLLND ATVGIFRGNQ MRLKRACIRK AKISAVAFRK bmy_09995T0/1-664 ---------- ---------- ---------- MRLKRACIRK AKISAVAFRK BACU000261/1-628 ---------- -MAFHGLLND ATVGIFRGNQ MRLKRACIRK AKISAVAFRK 101 150 ENSP00000294353/1-744 AFCHHKLVEL DATGVNADIT ITDIISGLGS NKWIQQNLQC LVLNSLTLSL ENSTTRP00000002530/1-681 AFCHHKLVEL DATGVNADIT ITDIISGLGS NKWIQQNLQC LVLNSLTLSL ENSBTAP00000026228/1-744 AFCHHKLVEL DATGVNADIT ITDIISGLGS NKWIQQNLQC LVLNSLTLSL bmy_09995T0/1-664 AFCHHKLVEL DATGVNADIT ITDIISGLGS NKWIQQNLQC LVLNSLTLSL BACU000261/1-628 AFCHHKLVEL DATGVNADIT ITDIISGLGS NKWIQQNLQC LVLNSLTLSL 151 200 ENSP00000294353/1-744 EDPYERCFSR LSGLRALSIT NVLFYNEDLA EVASLPRLES LDISNTSITD ENSTTRP00000002530/1-681 EDPYERCFSR LSGLRALSIT NVLFYNEDLA EVASLPRLES LDISNTSITD ENSBTAP00000026228/1-744 EDPYERCFSR LSGLRALSIT NVLFYNEDLA EVASLPRLES LDISNTSITD bmy_09995T0/1-664 EDPYERCFSR LSGLRALSIT NVLFYNEDLA EVASLPRLES LDISNTSITD BACU000261/1-628 EDPYERCFSR LSGLRALSIT NVLFYNEDLA EVASLPRLES LDISNTSITD 201 250 ENSP00000294353/1-744 ITALLACKDR LKSLTMHHLK CLKMTTTQIL DVVRELKHLN HLDISDDKQF ENSTTRP00000002530/1-681 ITALLACKDR LKSLTMHHLK CLKMTTTQIL DVVRELRHLN HLDISDDKQF ENSBTAP00000026228/1-744 ITALLACKDR LKSLTMHHLK CLKMTTTQIL DVVRELRHLN HLDISDDKQF bmy_09995T0/1-664 ITALLACKDR LKSLTMHHLK CLKMTTTQIL DVVRELRHLN HLDISDDKQF BACU000261/1-628 ITALLACKDR LKSLTMHHLK CLKMTTTQIL DVVRELRHLN HLDISDDKQF 251 300 ENSP00000294353/1-744 TSDIALRLLE QKDILPNLVS LDVSGRKHVT DKAVEAFIQQ RPSMQFVGLL ENSTTRP00000002530/1-681 TSDIALRLLE QKDILPNLVS LDVSGRKHVT DKAVEAFIQQ RPSMQFVGLL ENSBTAP00000026228/1-744 TSDIALRLLE QKDILPNLVS LDVSGRKHVT DKAVEAFIQQ RPSMQFVGLL bmy_09995T0/1-664 TSDIALRLLE QKDILPNLVS LDVSGRKHVT DKAVEAFIQQ RPSMQFVGLL BACU000261/1-628 TSDIALRLLE QKDILPNLVS LDVSGRKHVT DKAVEAFIQQ RPSMQFVGLL 301 350 ENSP00000294353/1-744 ATDAGYSEFL TGEGHLKVSG EANETQIAEA LKRYSERAFF VREALFHLFS ENSTTRP00000002530/1-681 ATDAGYSEFL TGEGHLKVSG EANETQIAEA LKRYSERAFF VREALFHLFS ENSBTAP00000026228/1-744 ATDAGYSEFL TGEGHLKVSG EANETQIAEA LKRYSERAFF VREALFHLFS bmy_09995T0/1-664 ATDAGYSEFL TGEGHLKVSG EANETQIAEA LKRYSERAFF VREALFHLFS BACU000261/1-628 ATDAGYSEFL TGEGHLKVSG EANETQIAEA LKRYSERAFF VREALFHLFS 351 400 ENSP00000294353/1-744 LTHVMEKTKP EILKLVVTGM RNHPMNLPVQ LAASACVFNL TKQDLAAGMP ENSTTRP00000002530/1-681 LTHVMEKTKP EILKLVVTGM RNHPMNLPVQ LAASACVFNL TKQDLAAGMP ENSBTAP00000026228/1-744 LTHVMEKTKP EILKLVVTGM RNHPMNLPVQ LAASACVFNL TKQDLAAGMP bmy_09995T0/1-664 LTHVMEKTKP EILKLVVTGM RNHPMNLPVQ LAASACVFNL TKQDLAAGMP BACU000261/1-628 LTHVMEKTKP EILKLVVTGM RNHPMNLPVQ LAASACVFNL TKQDLAAGMP 401 450 ENSP00000294353/1-744 VRLLADVTHL LLKAMEHFPN HQQLQKNCLL SLCSDRILQD VPFNR----- ENSTTRP00000002530/1-681 VRLLADVTHL LLKAMEHFPN HQQLQKNCLL SLCSDRILQD VPFNR----- ENSBTAP00000026228/1-744 VRLLADVTHL LLKAMEHFPN HQQLQKNCLL SLCSDRILQD VPFNR----- bmy_09995T0/1-664 VRLLADVTHL LLKAMEHFPN HQQLQKNCLL SLCSDRILQD VPFNRQVIAL BACU000261/1-628 VRLLADVTHL LLKAMEHFPN HQQ------- ---------- ---------- 451 500 ENSP00000294353/1-744 ---------- ---------- ---------- FEAAKLVMQW LCNHEDQNMQ ENSTTRP00000002530/1-681 ---------- ---------- ---------- FEAAKLVMQW LCNHEDQNMQ ENSBTAP00000026228/1-744 ---------- ---------- ---------- FEAAKLVMQW LCNHEDQNMQ bmy_09995T0/1-664 ELKMGQNGIL EIRLGSFLTI QDIPGVQLVK FEAAKLVMQW LCNHEDQNMQ BACU000261/1-628 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000294353/1-744 RMAVAIISIL AAKLSTEQTA QLGTELFIVR QLLQIVKQKT NQNSVDTTLK ENSTTRP00000002530/1-681 RMAVAIISIL AAKLSTEQTA QLGAELFIVR QLLQIVKQKT NQNSVDTTLK ENSBTAP00000026228/1-744 RMAVAIISIL AAKLSTEQTA QLGAELFIVR QLLQIVKQKT NQNSVDTTLK bmy_09995T0/1-664 RMAVAIISIL AAKLSTEQTA QLGAELFIVR QLLQIVKQKT NQNSVDTTLK BACU000261/1-628 ---------- ---LSTEQTA QLGAELFIVR QLLQIVKQKT NQNSVDTTLK 551 600 ENSP00000294353/1-744 FTLSALWNLT DESPTTCRHF IENQGLELFM RVLESFPTES SIQQKVLGLL ENSTTRP00000002530/1-681 FTLSALWNLT DESPTTCRHF IENQGLELFM RVLESFPTES SIQQKVLGLL ENSBTAP00000026228/1-744 FTLSALWNLT DESPTTCRHF IENQGLELFM RVLESFPTES SIQQKVLGLL bmy_09995T0/1-664 FTLSALWNLT DESPTTCRHF IENQGLELFM RVLESFPTES SIQQKVLGLL BACU000261/1-628 FTLSALWNLT DESPTTCRHF IENQGLELFM RVLESFPTES SIQQKVLGLL 601 650 ENSP00000294353/1-744 NNIAEVQELH SELMWKDFID HISSLLHSVE VEVSYFAAGI IAHLISRGEQ ENSTTRP00000002530/1-681 NNIAEVQELH SELMWKDFID HISSLLHSVE VEVSYFAAGI IAHLISRGEQ ENSBTAP00000026228/1-744 NNIAEVQELH SELMWKDFID HISSLLHSVE VEVSYFAAGI IAHLISRGEQ bmy_09995T0/1-664 NNIAEVQELH SELMWKDFID HISSLLHSVE VEVSYFAAGI IAHLISRGEQ BACU000261/1-628 NNIAEVQELH SELMWKDFID HISSLLHSVE VEVSYFAAGI IAHLISRGEQ 651 700 ENSP00000294353/1-744 AWTLSRSQRN SLLDDLHSAI LKWPTPECEM VAYRSFNPFF PLLGCFTTPG ENSTTRP00000002530/1-681 AWTLSRSQRN SLLDDLHSAI LKWPTPECEM VAYRSFNPFF PLLGCFTTPG ENSBTAP00000026228/1-744 AWTLSRSQRN SLLDDLHSAI LKWPTPECEM VAYRSFNPFF PLLGCFTTPG bmy_09995T0/1-664 AWTLSRSQRN SLLDDLHSAI LKWPTPECEM VAYR------ ---------- BACU000261/1-628 AWTLSRSQRN SLLDDLHSAI LKWPTPECEM VAYRSFNPFF PLLGCFTTPG 701 750 ENSP00000294353/1-744 VQLWAVWAMQ HVCSKNPSRY CSMLIEEGGL QHLYNIKDHE HTDPHVQQIA ENSTTRP00000002530/1-681 VQLWAVWAMQ HVCSKN---- ---------- ---------- ---------- ENSBTAP00000026228/1-744 VQLWAVWAMQ HVCSKNPSRY CSMLIEEGGL QHLYNIKEHE QTDPHVQQIA bmy_09995T0/1-664 ---------- ---------Y CSMLIEEGGL QHLYNIKEHE QTDPHVQQIA BACU000261/1-628 VQLWAVWAMQ HVCSKNPSRY CSMLIEEGGL QHLYNIKEHE QTDPHVQQIA 751 800 ENSP00000294353/1-744 VAILDSLEKH IVRHGRPPPC KKQPQARLN ENSTTRP00000002530/1-681 ---------- ---------- --------- ENSBTAP00000026228/1-744 VAILDSLEKH IVRHGRPPPC KKQSQARLN bmy_09995T0/1-664 VAILDSLEKH IVRHGRPPPC KKQPQARLN BACU000261/1-628 VAILDSLEKH IVRHGRPPPC KKQPQARLN