KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:28:19 2014  Check: 00 ..

 Name: ENSTTRP00000011158/1-207  Len:    207  Check:  741  Weight:  1.00
 Name: ENSP00000387077/1-207     Len:    207  Check:  9656  Weight:  1.00
 Name: bmy_22463T0/1-169         Len:    207  Check:  9911  Weight:  1.00
 Name: ENSBTAP00000026237/1-177  Len:    207  Check:  1575  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000011158/1-207  MKLVTLGADL FTVGERSLTT SLALLRCMSL DFSTPRVRMP LLCHALTVAV 
ENSP00000387077/1-207     MLLITLSANL FTVPERSLTT TFSFSRYKSS DRPAHKVSML LLCHALAIAV 
bmy_22463T0/1-169         ---------- ---------- ---------- --------ML LLCHALTVAV 
ENSBTAP00000026237/1-177  ---------- ---------- ---------- DFPTPGVRML LLCHALTVAV 


                          51                                                 100
ENSTTRP00000011158/1-207  VQTFIFSENR AFAKNINFYN VRPPLDPTPF PNSFKCFTCE NAGDNYNCNR 
ENSP00000387077/1-207     VQIVIFSESW AFAKNINFYN VRPPLDPTPF PNSFKCFTCE NAGDNYNCNR 
bmy_22463T0/1-169         AQTFIFSENR AFAKNINFYN VRPPLDPTPF PNSFKCFTCE NAGDNYNCNR 
ENSBTAP00000026237/1-177  VQTFIFSENR VFAKNINFYN VRPPLDPTPF PNSFKCFTCE NAGDNYNCNR 


                          101                                                150
ENSTTRP00000011158/1-207  WAKDKWCPQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 
ENSP00000387077/1-207     WAEDKWCPQN TQYCLTVHHF TSHGRSTSIT KKCASRSECH FVGCHHSRDS 
bmy_22463T0/1-169         WAEDKWCPQN TQYCLTVHHF TSHGRSTSIT KKCASTSECH FVGCHHSRDS 
ENSBTAP00000026237/1-177  WAEDKWCPQN TQYCLTVHHF TSHGRSISIT KKCASRSECH FVGCHHSQDS 


                          151                                                200
ENSTTRP00000011158/1-207  XXXECRSCCE GMICNVELPT NHTNAVFAVM HAQRTSGSHA PALHLPVLAW 
ENSP00000387077/1-207     EHTECRSCCE GMICNVELPT NHTNAVFAVM HAQRTSGSSA PTLYLPVLAW 
bmy_22463T0/1-169         EHTECRSCCE GMICNVELPT NHTNAVFAVM HAQRTSGSCA PALHLLLLAW 
ENSBTAP00000026237/1-177  EHTECRSCCE GMICNVELPT NHTNAVFAVM HAQRTSGSGA PALYLPVLAW 


                          201                                                250
ENSTTRP00000011158/1-207  AFMLLLM 
ENSP00000387077/1-207     VFVLPLL 
bmy_22463T0/1-169         AFVLLLM 
ENSBTAP00000026237/1-177  AFVLPLI