KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:24 2014 Check: 00 .. Name: ENSBTAP00000026265/1-480 Len: 481 Check: 4629 Weight: 1.00 Name: ENSP00000345681/1-480 Len: 481 Check: 6786 Weight: 1.00 Name: BACU007926/1-447 Len: 481 Check: 1928 Weight: 1.00 Name: bmy_09956T0/1-480 Len: 481 Check: 5926 Weight: 1.00 Name: ENSTTRP00000000940/1-392 Len: 481 Check: 7270 Weight: 1.00 // 1 50 ENSBTAP00000026265/1-480 MEVAPEQPRW MAHPAVLNAQ HPDSHHPGLP HNYMEPAQLL PPDEVDVFFN ENSP00000345681/1-480 MEVAPEQPRW MAHPAVLNAQ HPDSHHPGLA HNYMEPAQLL PPDEVDVFFN BACU007926/1-447 ---------- ---------- ---------- ---MEPAQLL PPDEVDVFFN bmy_09956T0/1-480 MEAAPEQPRW MAHPAVLNAQ HPDPHHPGLA HSYMEPAQLL PPDEVDVFFN ENSTTRP00000000940/1-392 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000026265/1-480 HLDSQGNPYY ANPAHARARV SYSPAHARLT GGQMCRPHLL HSPGLPWLDG ENSP00000345681/1-480 HLDSQGNPYY ANPAHARARV SYSPAHARLT GGQMCRPHLL HSPGLPWLDG BACU007926/1-447 HLDSQGNPYY ANPAHARARV SYSPAHARLT GGQMCRPHLL HSPGLPWLDG bmy_09956T0/1-480 HLDSQGNPYY ANPAHARARV SYSPAHARLT GGQMCRPHLL HSPGLPWLDG ENSTTRP00000000940/1-392 ---------- ---------- ---------- --------LL HSPGLPWLDG 101 150 ENSBTAP00000026265/1-480 GKAALSAAAA HHHNPWTVSP FSKTPLHPSA AGGPGGPLSV YPGAGAGGGG ENSP00000345681/1-480 GKAALSAAAA HHHNPWTVSP FSKTPLHPSA AGGPGGPLSV YPGAGGGSGG BACU007926/1-447 GKAALSAAAA HHHNPWTVSP FSKTPLHPAA AGGPGGPLSV YPGAGGGSGG bmy_09956T0/1-480 GKAALSAAAA HHHNPWTVSP FSKTPLHPAA AGGPGGPLSV YPGAGGGSGG ENSTTRP00000000940/1-392 GKAALSAAAA HHHNPWTVSP FSKTPLHPAA AGGPGGPLSV YPGAGGGSGG 151 200 ENSBTAP00000026265/1-480 GSG-SVASLT PTAAHSGTHL FGFPPTPPKE VSPDPSTTGA TSPASSSAGG ENSP00000345681/1-480 GSGSSVASLT PTAAHSGSHL FGFPPTPPKE VSPDPSTTGA ASPASSSAGG BACU007926/1-447 GAGSSVASLP PTAAHSGSHL FGFPPTPPKE VSPDPSTTGA ASPASSSAGG bmy_09956T0/1-480 GTGSSVASLP PTAAHSGSHL FGFPPTPPKE VSPDPSTTGA ASPASSSAGG ENSTTRP00000000940/1-392 GTGSSVASLP PTAAHSGSHL FGFPPTPPKE VSPDPSTTGA ASPASSSAGG 201 250 ENSBTAP00000026265/1-480 SAAPRGDDKD GIKYQVPLGE SMKMEGGSPL RPSLAAMGTQ PATHHPIPTY ENSP00000345681/1-480 SAA-RGEDKD GVKYQVSLTE SMKMESGSPL RPGLATMGTQ PATHHPIPTY BACU007926/1-447 GAA-RGEDKD GVKYQVSLTE SMKMESGSPL RPGLAAMGTQ PATHHPIPTY bmy_09956T0/1-480 GAA-RGEDKD GVKYQVSLTE SMKMESGSPL RPGLAAMGTQ PATHHPIPTY ENSTTRP00000000940/1-392 AAA-RGEDKD GVKYQVSLTE SMKMESGSPL RPGLAAMGTQ PATHHPIPTY 251 300 ENSBTAP00000026265/1-480 PSYVPAAAHD YSSGLFHPGG FLGGPASSFT PKQRSKARSC SEGRECVNCG ENSP00000345681/1-480 PSYVPAAAHD YSSGLFHPGG FLGGPASSFT PKQRSKARSC SEGRECVNCG BACU007926/1-447 PSYVPATAHD YSSGLFHPGG FLGGPASSFT PKQRSKARSC SEGRECVNCG bmy_09956T0/1-480 PSYVPATAHD YSSGLFHPGG FLGGPASSFT PKQRSKARSC SEGRECVNCG ENSTTRP00000000940/1-392 PSYVPATAHD YSSGLFHPGG FLGGPASSFT PKQRSKARSC SEGRECVNCG 301 350 ENSBTAP00000026265/1-480 ATATPLWRRD GTGHYLCNAC GLYHKMNGQN RPLIKPKRRL SAARRAGTCC ENSP00000345681/1-480 ATATPLWRRD GTGHYLCNAC GLYHKMNGQN RPLIKPKRRL SAARRAGTCC BACU007926/1-447 ATATPLWRRD GTGHYLCNAC GLYHKMNGQN RPLIKPKRRL SAARRAGTCC bmy_09956T0/1-480 ATATPLWRRD GTGHYLCNAC GLYHKMNGQN RPLIKPKRRL SAARRAGTCC ENSTTRP00000000940/1-392 ATATPLWRRD GTGHYLCNAC GLYHKMNGQN RPLIKPKRRL SAARRAGTCC 351 400 ENSBTAP00000026265/1-480 ANCQTTTTTL WRRNANGDPV CNACGLYYKL HNVNRPLTMK KEGIQTRNRK ENSP00000345681/1-480 ANCQTTTTTL WRRNANGDPV CNACGLYYKL HNVNRPLTMK KEGIQTRNRK BACU007926/1-447 ANCQTTTTTL WRRNANGDPV CNACGLYYKL HNVNRPLTMK KEGIQTRNRK bmy_09956T0/1-480 ANCQTTTTTL WRRNANGDPV CNACGLYYKL HNVNRPLTMK KEGIQTRNRK ENSTTRP00000000940/1-392 ANCQTTTTTL WRRNANGDPV CNACGLYYKL HNVNRPLTMK KEGIQTRNRK 401 450 ENSBTAP00000026265/1-480 MSSKSKKSKK GSECFEELSR CVQDKASPFS AAALAGHMAP VGHLPPFSHS ENSP00000345681/1-480 MSNKSKKSKK GAECFEELSK CMQEKSSPFS AAALAGHMAP VGHLPPFSHS BACU007926/1-447 MSNKSKKNKK GAECFEELSK CMQEKASPFS AAALAGHMAP VGHLPPFSHS bmy_09956T0/1-480 MSNKSKKNKK GAECFEELSK CMQEKASPFS AAALAGHMAP VGHLPPFSHS ENSTTRP00000000940/1-392 MSNKSKKNKK GAECFEELSK CMQEKASPFS AAALAGHMAP VGHLPPFSHS 451 500 ENSBTAP00000026265/1-480 GHILPTPTPI HPPSSLSFGH PHPSSMVTAM G ENSP00000345681/1-480 GHILPTPTPI HPSSSLSFGH PHPSSMVTAM G BACU007926/1-447 GHILPTPTPI HPSSSLSFGH PHPSSMVTAM G bmy_09956T0/1-480 GHILPTPTPI HPSSSLSFGH PHPSSMVTAM G ENSTTRP00000000940/1-392 GHILPTPTPI HPSSSLSFGH PHPSSMVTAM G